Sockeye Salmon Baseline for the Western Alaska Salmon Stock Identification Project PDF Download
Are you looking for read ebook online? Search for your book and save it on your Kindle device, PC, phones or tablets. Download Sockeye Salmon Baseline for the Western Alaska Salmon Stock Identification Project PDF full book. Access full book title Sockeye Salmon Baseline for the Western Alaska Salmon Stock Identification Project by Tyler H. Dann. Download full books in PDF and EPUB format.
Author: Tyler H. Dann
Publisher:
ISBN:
Category : Fish stock assessment
Languages : en
Pages : 121
Get Book Here
Book Description
Uncertainty about the magnitude, frequency, location, and timing of the nonlocal harvest of sockeye and chum salmon in Western Alaska fisheries was the impetus for the Western Alaska Salmon Stock Identification Project (WASSIP). The project was designed to use genetic data in mixed stock analysis (MSA) to reduce this uncertainty. A baseline of allele frequencies is required for use in mixed stock analysis to estimate the stock of origin of harvested fish. This report describes the methodology we used to understand the population genetic structure and build a baseline for use in MSA, describes the performance of the baseline for MSA, and provides guidance on how to interpret biases documented in the MSA tests when evaluating future stock composition estimates of WASSIP mixtures.
Author: Tyler H. Dann
Publisher:
ISBN:
Category : Fish stock assessment
Languages : en
Pages : 121
Get Book Here
Book Description
Uncertainty about the magnitude, frequency, location, and timing of the nonlocal harvest of sockeye and chum salmon in Western Alaska fisheries was the impetus for the Western Alaska Salmon Stock Identification Project (WASSIP). The project was designed to use genetic data in mixed stock analysis (MSA) to reduce this uncertainty. A baseline of allele frequencies is required for use in mixed stock analysis to estimate the stock of origin of harvested fish. This report describes the methodology we used to understand the population genetic structure and build a baseline for use in MSA, describes the performance of the baseline for MSA, and provides guidance on how to interpret biases documented in the MSA tests when evaluating future stock composition estimates of WASSIP mixtures.
Author: Nicholas A. Decovich
Publisher:
ISBN:
Category : Chum salmon
Languages : en
Pages : 110
Get Book Here
Book Description
Uncertainty about the magnitude, frequency, location, and timing of the nonlocal harvest of sockeye and chum salmon was the impetus for the Western Alaska Salmon Stock Identification Program. The program was designed to use genetic data in mixed stock analysis to reduce this uncertainty. A baseline of allele frequencies in spawning populations is required for use in mixed-stock analysis to estimate the stock of origin of harvested fish. This report describes the methodology used to understand the population genetic structure among chum salmon populations and to build and test a baseline for use in mixed stock analysis of chum salmon. Of the 35,921 fish from 434 collections selected to be genotyped, the final baseline was composed of 32,817 fish from 402 collections representing 310 populations. Average population sample size was 106 fish. Reporting groups were determined through a combination of stakeholder needs and identifiability using genetic information, as measured using proof tests. The final reporting groups included Asia, Kotzebue Sound, Coastal Western Alaska, Upper Yukon River, Northern District (Alaska Peninsula), Northwest District (Alaska Peninsula), South Peninsula (Alaska Peninsula), Chignik/Kodiak, and East of Kodiak.
Author: Kyle Shedd
Publisher:
ISBN:
Category : Fish populations
Languages : en
Pages : 233
Get Book Here
Book Description
Precise, accurate estimates of stock-specific harvests of sockeye salmon (Oncorhynchus nerka) are lacking for commercial fisheries in the Kodiak Management Area (KMA. Such information would be useful for reconstructing runs, building accurate brood tables to define escapement goals, and refining management by identifying spatial and temporal harvest patterns of local and non-local stocks. Hence, the department developed a genetic baseline for mixed-stock analysis (MSA) to estimate the stock compositions of sockeye salmon harvests in select KMA commercial salmon fisheries from 2014-2016. This report describes the methodology used to build a baseline, examines costs and benefits of a reduced marker set, describes the performance of the baseline for MSA, and provides guidance on how to interpret biases documented in the MSA tests when evaluating future stock composition estimates of KMA fishery mixtures. This genetic baseline uses single nucleotide polymorphism (SNP) markers and builds on the Western Alaska Salmon Stock Identification Project (WASSIP) sockeye salmon baseline to include additional populations in KMA and extends coverage south from Cape Suckling, Alaska to the Columbia River, Washington. The final baseline contains 65,332 individuals from 762 collections representing 473 populations in 15 reporting groups. Mean population sample size was 138 individuals. We used 2 types of tests to measure the baseline’s ability to correctly allocate to reporting groups: 100% proof tests and fishery scenario tests. Correct allocations for 100% proof tests averaged 98.2%, ranged from 80.4% to 99.6%, and 73 of the 75 proof tests met our goal of 90% correct allocation. Fishery scenario tests did not indicate any consistent directional biases among reporting groups, but misallocation was observed between Frazer and Ayakulik. Reducing the baseline from 96 to 48 SNPs had negligible effects on MSA estimates. This baseline will provide accurate and precise estimates of stock composition in KMA sockeye salmon fisheries.
Author: Tyler H. Dann
Publisher:
ISBN:
Category : Fish stock assessment
Languages : en
Pages : 258
Get Book Here
Book Description
Uncertainty about the magnitude, frequency, location, and timing of stock-specific sockeye and chum salmon harvest in Western Alaska fisheries was the impetus for the Western Alaska Salmon Stock Identification Program (WASSIP). The program was designed to use genetic data in mixed stock analysis of fisheries samples to more clearly describe harvest patterns of sockeye and chum salmon stocks in western Alaska fisheries (from Chignik Area to Kuskokwim Area for sockeye salmon). Stock composition estimates for temporal strata across fisheries are required to estimate stock-specific harvest numbers and rates. This report describes the methodology used to estimate stock compositions for sockeye salmon, presents stock composition estimates, and provides guidance on how to interpret biases documented in the genetic baseline.
Author:
Publisher:
ISBN:
Category : Chum salmon
Languages : en
Pages : 237
Get Book Here
Book Description
The Western Alaska Salmon Stock Identification Project (WASSIP) was initiated in 2006 with a memorandum of understanding executed by an Advisory Panel of 11 signatories, including Alaska Department of Fish and Game, and stakeholders from throughout western Alaska. The Advisory Panel also includes a federal representative. The purpose of WASSIP is to provide a mechanism for participants to engage in a collaborative decision-making process to expend allocated funds for the purposes of identifying the stock contributions of western Alaska sockeye and chum salmon to fisheries in and around western Alaska. The Advisory Panel approved a catch sampling plan and the Alaska Department of Fish and Game implemented comprehensive sampling of chum Oncorhynchus keta and sockeye O. nerka salmon caught in most commercial and subsistence salmon fisheries in marine and estuarine areas of western Alaska where catches of chum or sockeye salmon occurred from 2006 to 2009. For WASSIP, western Alaska represents a broad geographic region including areas inland and within state-managed marine waters from Kilokak Rocks (eastern end of Chignik Area) southwest along the coast to Scotch Cap (Unimak Pass) and from Scotch Cap north along the coast to Point Hope (northern end of Kotzebue Area). This report summarizes results of fisheries sampling in the WASSIP area from 2006 to 2009. We include summaries of estimated catch (harvest), samples collected, and samples intended for DNA analysis by strata organized by geography, species, year, and temporally within years.
Author: Christopher Habicht
Publisher:
ISBN:
Category : Fish stock assessment
Languages : en
Pages : 751
Get Book Here
Book Description
Uncertainty about the magnitude, frequency, location, and timing of stock-specific sockeye and chum salmon harvest in western Alaska fisheries was the impetus for the Western Alaska Salmon Stock Identification Program (WASSIP). The program was designed to use genetic data in mixed stock analysis (MSA) of fisheries samples to more clearly describe harvest patterns of sockeye and chum salmon stocks in western Alaska fisheries. This report reviews the history of WASSIP, summarizes the memorandum of understanding as the guiding document for the program, and reviews participation and contributions of the Advisory Panel and Technical Committee to the program. Brief descriptions of WASSIP sockeye fisheries are provided and previous sockeye tagging and stock identification studies are reviewed. We describe the methodology used to estimate stock-specific harvests and harvest rates for sockeye salmon, report these estimates, and provide guidance on interpretation of results. These results provide the most comprehensive examination of stock-specific harvest and harvest rates across western Alaska sockeye salmon fisheries ever attempted.
Author: Douglas Murrell Eggers
Publisher:
ISBN:
Category : Escapement (Fisheries)
Languages : en
Pages : 27
Get Book Here
Book Description
The Western Alaska Salmon Stock Identification Program (WASSIP) was initiated in 2006 with a memorandum of understanding executed by an Advisory Panel of 11 signatories, including Alaska Department of Fish and Game, and stakeholders from throughout western Alaska. The purpose of WASSIP was to identify stock contributions of sockeye (Oncorhynchus nerka) and chum salmon (O. keta) to commercial and subsistence fisheries from Chignik northward to Kotzebue Sound, and to extend those estimates to stock-specific harvest rates. This report describes the regional fishery model and estimation of escapement and harvest rates for sockeye salmon. Escapements and associated uncertainties were estimated for each of the WASSIP sockeye salmon regional reporting groups (Chignik, South Peninsula, North Peninsula, Bristol Bay, Kuskokwim Bay), and subregional reporting groups (i.e., stocks). The 2006 to 2008 escapement estimates were based on information available in annual area management reports, other monitoring and assessment reports, and department databases.
Author: M. Birch Foster
Publisher:
ISBN:
Category : Sockeye salmon
Languages : en
Pages : 24
Get Book Here
Book Description
The Western Alaska Salmon Stock Identification Program (WASSIP) was conducted to determine stock origin of chum salmon and sockeye salmon in commercial fisheries of western Alaska. Concurrent sampling of sockeye salmon scales was conducted in a limited portion of areas from Chignik Area (Area L) fishery and North Alaska Peninsula (Area M) fishery. These sampled areas lie on the north and south sides of the Alaska Peninsula in the Port Moller, Chignik and Port Heiden areas.
Author: Michelle Stratton
Publisher:
ISBN:
Category : Escapement (Fisheries)
Languages : en
Pages : 12
Get Book Here
Book Description
This project will continue the Genetic Stock Identification (GSI) project on sockeye salmon escaping through the Chignik weir following protocol established by the Gene Conservation Laboratory (GCL) of the Alaska Department of Fish and Game (ADF&G). Concurrent with ASL sampling, 190 fish at each of 6 strata (1,140 total samples) during the transition period will have the left axillary process collected and sent to Anchorage for analysis for post-season stock apportionment of Chignik River early- and late-run sockeye salmon.
Author: Harold J. Geiger
Publisher:
ISBN:
Category : Fish stock assessment
Languages : en
Pages : 26
Get Book Here
Book Description
"Scale pattern analysis was shown to be an effective tool for discriminating between Bristol Bay and North Peninsula stocks in the 2.3 age class"--Page vii.
