Models and Algorithms for Biomolecules and Molecular Networks

Models and Algorithms for Biomolecules and Molecular Networks PDF Author: Bhaskar DasGupta
Publisher: John Wiley & Sons
ISBN: 0470601930
Category : Science
Languages : en
Pages : 260

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Book Description
By providing expositions to modeling principles, theories, computational solutions, and open problems, this reference presents a full scope on relevant biological phenomena, modeling frameworks, technical challenges, and algorithms. Up-to-date developments of structures of biomolecules, systems biology, advanced models, and algorithms Sampling techniques for estimating evolutionary rates and generating molecular structures Accurate computation of probability landscape of stochastic networks, solving discrete chemical master equations End-of-chapter exercises

Models and Algorithms for Biomolecules and Molecular Networks

Models and Algorithms for Biomolecules and Molecular Networks PDF Author: Bhaskar DasGupta
Publisher: John Wiley & Sons
ISBN: 0470601930
Category : Science
Languages : en
Pages : 260

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Book Description
By providing expositions to modeling principles, theories, computational solutions, and open problems, this reference presents a full scope on relevant biological phenomena, modeling frameworks, technical challenges, and algorithms. Up-to-date developments of structures of biomolecules, systems biology, advanced models, and algorithms Sampling techniques for estimating evolutionary rates and generating molecular structures Accurate computation of probability landscape of stochastic networks, solving discrete chemical master equations End-of-chapter exercises

Surface Electromyography

Surface Electromyography PDF Author: Roberto Merletti
Publisher: John Wiley & Sons
ISBN: 1119082900
Category : Science
Languages : en
Pages : 594

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Book Description
Reflects on developments in noninvasive electromyography, and includes advances and applications in signal detection, processing and interpretation Addresses EMG imaging technology together with the issue of decomposition of surface EMG Includes advanced single and multi-channel techniques for information extraction from surface EMG signals Presents the analysis and information extraction of surface EMG at various scales, from motor units to the concept of muscle synergies.

Epistemology of the Cell

Epistemology of the Cell PDF Author: Edward R. Dougherty
Publisher: John Wiley & Sons
ISBN: 1118104870
Category : Science
Languages : en
Pages : 204

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Book Description
"Honorable mention – Biomedicine and Neuroscience, 2011 Prose Awards" An examination of how the cell should be described in order to effectively process biological data "The fruitful pursuit of biological knowledge requires one to take Einstein's admonition [on science without epistemology] as a practical demand for scientific research, to recognize Waddington's characterization of the subject matter of biology, and to embrace Wiener's conception of the form of biological knowledge in response to its subject matter. It is from this vantage point that we consider the epistemology of the cell." —from the Preface In the era of high biological data throughput, biomedical engineers need a more systematic knowledge of the cell in order to perform more effective data handling. Epistemology of the Cell is the first authored book to break down this knowledge. This text examines the place of biological knowledge within the framework of science as a whole and addresses issues focused on the specific nature of biology, how biology is studied, and how biological knowledge is translated into applications, in particular with regard to medicine. The book opens with a general discussion of the historical development of human understanding of scientific knowledge, the scientific method, and the manner in which scientific knowledge is represented in mathematics. The narrative then gets specific for biology, focusing on knowledge of the cell, the basic unit of life. The salient point is the analogy between a systems-based analysis of factory regulation and the regulation of the cell. Each chapter represents a key topic of current interest, including: Causality and randomness Translational science Stochastic validation: classification Stochastic validation: networks Model-based experimentation in biology Epistemology of the Cell is written for biomedical researchers whose interests include bioinformatics, biological modeling, biostatistics, and biological signal processing.

Biomedical Signal Analysis

Biomedical Signal Analysis PDF Author: Rangaraj M. Rangayyan
Publisher: John Wiley & Sons
ISBN: 1119825857
Category : Science
Languages : en
Pages : 724

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Book Description
Biomedical Signal Analysis Comprehensive resource covering recent developments, applications of current interest, and advanced techniques for biomedical signal analysis Biomedical Signal Analysis provides extensive insight into digital signal processing techniques for filtering, identification, characterization, classification, and analysis of biomedical signals with the aim of computer-aided diagnosis, taking a unique approach by presenting case studies encountered in the authors’ research work. Each chapter begins with the statement of a biomedical signal problem, followed by a selection of real-life case studies and illustrations with the associated signals. Signal processing, modeling, or analysis techniques are then presented, starting with relatively simple “textbook” methods, followed by more sophisticated research-informed approaches. Each chapter concludes with solutions to practical applications. Illustrations of real-life biomedical signals and their derivatives are included throughout. The third edition expands on essential background material and advanced topics without altering the underlying pedagogical approach and philosophy of the successful first and second editions. The book is enhanced by a large number of study questions and laboratory exercises as well as an online repository with solutions to problems and data files for laboratory work and projects. Biomedical Signal Analysis provides theoretical and practical information on: The origin and characteristics of several biomedical signals Analysis of concurrent, coupled, and correlated processes, with applications in monitoring of sleep apnea Filtering for removal of artifacts, random noise, structured noise, and physiological interference in signals generated by stationary, nonstationary, and cyclostationary processes Detection and characterization of events, covering methods for QRS detection, identification of heart sounds, and detection of the dicrotic notch Analysis of waveshape and waveform complexity Interpretation and analysis of biomedical signals in the frequency domain Mathematical, electrical, mechanical, and physiological modeling of biomedical signals and systems Sophisticated analysis of nonstationary, multicomponent, and multisource signals using wavelets, time-frequency representations, signal decomposition, and dictionary-learning methods Pattern classification and computer-aided diagnosis Biomedical Signal Analysis is an ideal learning resource for senior undergraduate and graduate engineering students. Introductory sections on signals, systems, and transforms make this book accessible to students in disciplines other than electrical engineering.

Physiological Control Systems

Physiological Control Systems PDF Author: Michael C. K. Khoo
Publisher: John Wiley & Sons
ISBN: 1119055334
Category : Science
Languages : en
Pages : 468

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Book Description
A guide to common control principles and how they are used to characterize a variety of physiological mechanisms The second edition of Physiological Control Systems offers an updated and comprehensive resource that reviews the fundamental concepts of classical control theory and how engineering methodology can be applied to obtain a quantitative understanding of physiological systems. The revised text also contains more advanced topics that feature applications to physiology of nonlinear dynamics, parameter estimation methods, and adaptive estimation and control. The author—a noted expert in the field—includes a wealth of worked examples that illustrate key concepts and methodology and offers in-depth analyses of selected physiological control models that highlight the topics presented. The author discusses the most noteworthy developments in system identification, optimal control, and nonlinear dynamical analysis and targets recent bioengineering advances. Designed to be a practical resource, the text includes guided experiments with simulation models (using Simulink/Matlab). Physiological Control Systems focuses on common control principles that can be used to characterize a broad variety of physiological mechanisms. This revised resource: Offers new sections that explore identification of nonlinear and time-varying systems, and provide the background for understanding the link between continuous-time and discrete-time dynamic models Presents helpful, hands-on experimentation with computer simulation models Contains fully updated problems and exercises at the end of each chapter Written for biomedical engineering students and biomedical scientists, Physiological Control Systems, offers an updated edition of this key resource for understanding classical control theory and its application to physiological systems. It also contains contemporary topics and methodologies that shape bioengineering research today.

Computational Modeling and Simulation Examples in Bioengineering

Computational Modeling and Simulation Examples in Bioengineering PDF Author: Nenad Filipovic
Publisher: John Wiley & Sons
ISBN: 1119563941
Category : Science
Languages : en
Pages : 386

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Book Description
A systematic overview of the quickly developing field of bioengineering—with state-of-the-art modeling software! Computational Modeling and Simulation Examples in Bioengineering provides a comprehensive introduction to the emerging field of bioengineering. It provides the theoretical background necessary to simulating pathological conditions in the bones, muscles, cardiovascular tissue, and cancers, as well as lung and vertigo disease. The methodological approaches used for simulations include the finite element, dissipative particle dynamics, and lattice Boltzman. The text includes access to a state-of-the-art software package for simulating the theoretical problems. In this way, the book enhances the reader's learning capabilities in the field of biomedical engineering. The aim of this book is to provide concrete examples of applied modeling in biomedical engineering. Examples in a wide range of areas equip the reader with a foundation of knowledge regarding which problems can be modeled with which numerical methods. With more practical examples and more online software support than any competing text, this book organizes the field of computational bioengineering into an accessible and thorough introduction. Computational Modeling and Simulation Examples in Bioengineering: Includes a state-of-the-art software package enabling readers to engage in hands-on modeling of the examples in the book Provides a background on continuum and discrete modeling, along with equations and derivations for three key numerical methods Considers examples in the modeling of bones, skeletal muscles, cartilage, tissue engineering, blood flow, plaque, and more Explores stent deployment modeling as well as stent design and optimization techniques Generates different examples of fracture fixation with respect to the advantages in medical practice applications Computational Modeling and Simulation Examples in Bioengineering is an excellent textbook for students of bioengineering, as well as a support for basic and clinical research. Medical doctors and other clinical professionals will also benefit from this resource and guide to the latest modeling techniques.

Algorithms in Computational Molecular Biology

Algorithms in Computational Molecular Biology PDF Author: Mourad Elloumi
Publisher: John Wiley & Sons
ISBN: 1118101987
Category : Science
Languages : en
Pages : 1027

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Book Description
This book represents the most comprehensive and up-to-date collection of information on the topic of computational molecular biology. Bringing the most recent research into the forefront of discussion, Algorithms in Computational Molecular Biology studies the most important and useful algorithms currently being used in the field, and provides related problems. It also succeeds where other titles have failed, in offering a wide range of information from the introductory fundamentals right up to the latest, most advanced levels of study.

Functional Coherence of Molecular Networks in Bioinformatics

Functional Coherence of Molecular Networks in Bioinformatics PDF Author: Mehmet Koyutürk
Publisher: Springer Science & Business Media
ISBN: 1461403200
Category : Science
Languages : en
Pages : 235

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Book Description
Molecular networks provide descriptions of the organization of various biological processes, including cellular signaling, metabolism, and genetic regulation. Knowledge on molecular networks is commonly used for systems level analysis of biological function; research and method development in this area has grown tremendously in the past few years. This book will provide a detailed review of existing knowledge on the functional characterization of biological networks. In 15 chapters authored by an international group of prolific systems biology and bioinformatics researchers, it will organize, conceptualize, and summarize the existing core of research results and computational methods on understanding biological function from a network perspective.

Network Bioscience Volume II

Network Bioscience Volume II PDF Author: Marco Pellegrini
Publisher: Frontiers Media SA
ISBN: 2832532039
Category : Science
Languages : en
Pages : 168

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Book Description


Advances in Protein Molecular and Structural Biology Methods

Advances in Protein Molecular and Structural Biology Methods PDF Author: Timir Tripathi
Publisher: Academic Press
ISBN: 0323902650
Category : Science
Languages : en
Pages : 716

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Book Description
Advances in Protein Molecular and Structural Biology Methods offers a complete overview of the latest tools and methods applicable to the study of proteins at the molecular and structural level. The book begins with sections exploring tools to optimize recombinant protein expression and biophysical techniques such as fluorescence spectroscopy, NMR, mass spectrometry, cryo-electron microscopy, and X-ray crystallography. It then moves towards computational approaches, considering structural bioinformatics, molecular dynamics simulations, and deep machine learning technologies. The book also covers methods applied to intrinsically disordered proteins (IDPs)followed by chapters on protein interaction networks, protein function, and protein design and engineering. It provides researchers with an extensive toolkit of methods and techniques to draw from when conducting their own experimental work, taking them from foundational concepts to practical application. - Presents a thorough overview of the latest and emerging methods and technologies for protein study - Explores biophysical techniques, including nuclear magnetic resonance, X-ray crystallography, and cryo-electron microscopy - Includes computational and machine learning methods - Features a section dedicated to tools and techniques specific to studying intrinsically disordered proteins