Author: Alain Zuur
Publisher: Springer Science & Business Media
ISBN: 0387874585
Category : Science
Languages : en
Pages : 579
Book Description
This book discusses advanced statistical methods that can be used to analyse ecological data. Most environmental collected data are measured repeatedly over time, or space and this requires the use of GLMM or GAMM methods. The book starts by revising regression, additive modelling, GAM and GLM, and then discusses dealing with spatial or temporal dependencies and nested data.
Mixed Effects Models and Extensions in Ecology with R
Mixed Effects Models and Extensions in Ecology with R.
Author: Alain F. Zuur
Publisher:
ISBN: 9780387875163
Category : Ecology
Languages : en
Pages : 600
Book Description
Publisher:
ISBN: 9780387875163
Category : Ecology
Languages : en
Pages : 600
Book Description
Linear Mixed-Effects Models Using R
Author: Andrzej Gałecki
Publisher: Springer Science & Business Media
ISBN: 1461439000
Category : Mathematics
Languages : en
Pages : 558
Book Description
Linear mixed-effects models (LMMs) are an important class of statistical models that can be used to analyze correlated data. Such data are encountered in a variety of fields including biostatistics, public health, psychometrics, educational measurement, and sociology. This book aims to support a wide range of uses for the models by applied researchers in those and other fields by providing state-of-the-art descriptions of the implementation of LMMs in R. To help readers to get familiar with the features of the models and the details of carrying them out in R, the book includes a review of the most important theoretical concepts of the models. The presentation connects theory, software and applications. It is built up incrementally, starting with a summary of the concepts underlying simpler classes of linear models like the classical regression model, and carrying them forward to LMMs. A similar step-by-step approach is used to describe the R tools for LMMs. All the classes of linear models presented in the book are illustrated using real-life data. The book also introduces several novel R tools for LMMs, including new class of variance-covariance structure for random-effects, methods for influence diagnostics and for power calculations. They are included into an R package that should assist the readers in applying these and other methods presented in this text.
Publisher: Springer Science & Business Media
ISBN: 1461439000
Category : Mathematics
Languages : en
Pages : 558
Book Description
Linear mixed-effects models (LMMs) are an important class of statistical models that can be used to analyze correlated data. Such data are encountered in a variety of fields including biostatistics, public health, psychometrics, educational measurement, and sociology. This book aims to support a wide range of uses for the models by applied researchers in those and other fields by providing state-of-the-art descriptions of the implementation of LMMs in R. To help readers to get familiar with the features of the models and the details of carrying them out in R, the book includes a review of the most important theoretical concepts of the models. The presentation connects theory, software and applications. It is built up incrementally, starting with a summary of the concepts underlying simpler classes of linear models like the classical regression model, and carrying them forward to LMMs. A similar step-by-step approach is used to describe the R tools for LMMs. All the classes of linear models presented in the book are illustrated using real-life data. The book also introduces several novel R tools for LMMs, including new class of variance-covariance structure for random-effects, methods for influence diagnostics and for power calculations. They are included into an R package that should assist the readers in applying these and other methods presented in this text.
Mixed Effects Models for Complex Data
Author: Lang Wu
Publisher: CRC Press
ISBN: 1420074083
Category : Mathematics
Languages : en
Pages : 436
Book Description
Although standard mixed effects models are useful in a range of studies, other approaches must often be used in correlation with them when studying complex or incomplete data. Mixed Effects Models for Complex Data discusses commonly used mixed effects models and presents appropriate approaches to address dropouts, missing data, measurement errors,
Publisher: CRC Press
ISBN: 1420074083
Category : Mathematics
Languages : en
Pages : 436
Book Description
Although standard mixed effects models are useful in a range of studies, other approaches must often be used in correlation with them when studying complex or incomplete data. Mixed Effects Models for Complex Data discusses commonly used mixed effects models and presents appropriate approaches to address dropouts, missing data, measurement errors,
Analyzing Ecological Data
Author: Alain Zuur
Publisher: Springer
ISBN: 0387459723
Category : Science
Languages : en
Pages : 686
Book Description
This book provides a practical introduction to analyzing ecological data using real data sets. The first part gives a largely non-mathematical introduction to data exploration, univariate methods (including GAM and mixed modeling techniques), multivariate analysis, time series analysis, and spatial statistics. The second part provides 17 case studies. The case studies include topics ranging from terrestrial ecology to marine biology and can be used as a template for a reader’s own data analysis. Data from all case studies are available from www.highstat.com. Guidance on software is provided in the book.
Publisher: Springer
ISBN: 0387459723
Category : Science
Languages : en
Pages : 686
Book Description
This book provides a practical introduction to analyzing ecological data using real data sets. The first part gives a largely non-mathematical introduction to data exploration, univariate methods (including GAM and mixed modeling techniques), multivariate analysis, time series analysis, and spatial statistics. The second part provides 17 case studies. The case studies include topics ranging from terrestrial ecology to marine biology and can be used as a template for a reader’s own data analysis. Data from all case studies are available from www.highstat.com. Guidance on software is provided in the book.
Ecological Models and Data in R
Author: Benjamin M. Bolker
Publisher: Princeton University Press
ISBN: 0691125228
Category : Computers
Languages : en
Pages : 408
Book Description
Introduction and background; Exploratory data analysis and graphics; Deterministic functions for ecological modeling; Probability and stochastic distributions for ecological modeling; Stochatsic simulation and power analysis; Likelihood and all that; Optimization and all that; Likelihood examples; Standar statistics revisited; Modeling variance; Dynamic models.
Publisher: Princeton University Press
ISBN: 0691125228
Category : Computers
Languages : en
Pages : 408
Book Description
Introduction and background; Exploratory data analysis and graphics; Deterministic functions for ecological modeling; Probability and stochastic distributions for ecological modeling; Stochatsic simulation and power analysis; Likelihood and all that; Optimization and all that; Likelihood examples; Standar statistics revisited; Modeling variance; Dynamic models.
Introduction to WinBUGS for Ecologists
Author: Marc Kéry
Publisher: Academic Press
ISBN: 0123786061
Category : Science
Languages : en
Pages : 321
Book Description
Introduction to WinBUGS for Ecologists introduces applied Bayesian modeling to ecologists using the highly acclaimed, free WinBUGS software. It offers an understanding of statistical models as abstract representations of the various processes that give rise to a data set. Such an understanding is basic to the development of inference models tailored to specific sampling and ecological scenarios. The book begins by presenting the advantages of a Bayesian approach to statistics and introducing the WinBUGS software. It reviews the four most common statistical distributions: the normal, the uniform, the binomial, and the Poisson. It describes the two different kinds of analysis of variance (ANOVA): one-way and two- or multiway. It looks at the general linear model, or ANCOVA, in R and WinBUGS. It introduces generalized linear model (GLM), i.e., the extension of the normal linear model to allow error distributions other than the normal. The GLM is then extended contain additional sources of random variation to become a generalized linear mixed model (GLMM) for a Poisson example and for a binomial example. The final two chapters showcase two fairly novel and nonstandard versions of a GLMM. The first is the site-occupancy model for species distributions; the second is the binomial (or N-) mixture model for estimation and modeling of abundance. - Introduction to the essential theories of key models used by ecologists - Complete juxtaposition of classical analyses in R and Bayesian analysis of the same models in WinBUGS - Provides every detail of R and WinBUGS code required to conduct all analyses - Companion Web Appendix that contains all code contained in the book and additional material (including more code and solutions to exercises)
Publisher: Academic Press
ISBN: 0123786061
Category : Science
Languages : en
Pages : 321
Book Description
Introduction to WinBUGS for Ecologists introduces applied Bayesian modeling to ecologists using the highly acclaimed, free WinBUGS software. It offers an understanding of statistical models as abstract representations of the various processes that give rise to a data set. Such an understanding is basic to the development of inference models tailored to specific sampling and ecological scenarios. The book begins by presenting the advantages of a Bayesian approach to statistics and introducing the WinBUGS software. It reviews the four most common statistical distributions: the normal, the uniform, the binomial, and the Poisson. It describes the two different kinds of analysis of variance (ANOVA): one-way and two- or multiway. It looks at the general linear model, or ANCOVA, in R and WinBUGS. It introduces generalized linear model (GLM), i.e., the extension of the normal linear model to allow error distributions other than the normal. The GLM is then extended contain additional sources of random variation to become a generalized linear mixed model (GLMM) for a Poisson example and for a binomial example. The final two chapters showcase two fairly novel and nonstandard versions of a GLMM. The first is the site-occupancy model for species distributions; the second is the binomial (or N-) mixture model for estimation and modeling of abundance. - Introduction to the essential theories of key models used by ecologists - Complete juxtaposition of classical analyses in R and Bayesian analysis of the same models in WinBUGS - Provides every detail of R and WinBUGS code required to conduct all analyses - Companion Web Appendix that contains all code contained in the book and additional material (including more code and solutions to exercises)
Mixed-Effects Models in S and S-PLUS
Author: José C. Pinheiro
Publisher: Springer Science & Business Media
ISBN: 1441903178
Category : Computers
Languages : en
Pages : 538
Book Description
R, linear models, random, fixed, data, analysis, fit.
Publisher: Springer Science & Business Media
ISBN: 1441903178
Category : Computers
Languages : en
Pages : 538
Book Description
R, linear models, random, fixed, data, analysis, fit.
Multilevel Modeling Using R
Author: W. Holmes Finch
Publisher: CRC Press
ISBN: 1351062255
Category : Mathematics
Languages : en
Pages : 253
Book Description
Like its bestselling predecessor, Multilevel Modeling Using R, Second Edition provides the reader with a helpful guide to conducting multilevel data modeling using the R software environment. After reviewing standard linear models, the authors present the basics of multilevel models and explain how to fit these models using R. They then show how to employ multilevel modeling with longitudinal data and demonstrate the valuable graphical options in R. The book also describes models for categorical dependent variables in both single level and multilevel data. New in the Second Edition: Features the use of lmer (instead of lme) and including the most up to date approaches for obtaining confidence intervals for the model parameters. Discusses measures of R2 (the squared multiple correlation coefficient) and overall model fit. Adds a chapter on nonparametric and robust approaches to estimating multilevel models, including rank based, heavy tailed distributions, and the multilevel lasso. Includes a new chapter on multivariate multilevel models. Presents new sections on micro-macro models and multilevel generalized additive models. This thoroughly updated revision gives the reader state-of-the-art tools to launch their own investigations in multilevel modeling and gain insight into their research. About the Authors: W. Holmes Finch is the George and Frances Ball Distinguished Professor of Educational Psychology at Ball State University. Jocelyn E. Bolin is a Professor in the Department of Educational Psychology at Ball State University. Ken Kelley is the Edward F. Sorin Society Professor of IT, Analytics and Operations and the Associate Dean for Faculty and Research for the Mendoza College of Business at the University of Notre Dame.
Publisher: CRC Press
ISBN: 1351062255
Category : Mathematics
Languages : en
Pages : 253
Book Description
Like its bestselling predecessor, Multilevel Modeling Using R, Second Edition provides the reader with a helpful guide to conducting multilevel data modeling using the R software environment. After reviewing standard linear models, the authors present the basics of multilevel models and explain how to fit these models using R. They then show how to employ multilevel modeling with longitudinal data and demonstrate the valuable graphical options in R. The book also describes models for categorical dependent variables in both single level and multilevel data. New in the Second Edition: Features the use of lmer (instead of lme) and including the most up to date approaches for obtaining confidence intervals for the model parameters. Discusses measures of R2 (the squared multiple correlation coefficient) and overall model fit. Adds a chapter on nonparametric and robust approaches to estimating multilevel models, including rank based, heavy tailed distributions, and the multilevel lasso. Includes a new chapter on multivariate multilevel models. Presents new sections on micro-macro models and multilevel generalized additive models. This thoroughly updated revision gives the reader state-of-the-art tools to launch their own investigations in multilevel modeling and gain insight into their research. About the Authors: W. Holmes Finch is the George and Frances Ball Distinguished Professor of Educational Psychology at Ball State University. Jocelyn E. Bolin is a Professor in the Department of Educational Psychology at Ball State University. Ken Kelley is the Edward F. Sorin Society Professor of IT, Analytics and Operations and the Associate Dean for Faculty and Research for the Mendoza College of Business at the University of Notre Dame.
Mixed Effects Models for the Population Approach
Author: Marc Lavielle
Publisher: CRC Press
ISBN: 1482226510
Category : Mathematics
Languages : en
Pages : 380
Book Description
Wide-Ranging Coverage of Parametric Modeling in Linear and Nonlinear Mixed Effects ModelsMixed Effects Models for the Population Approach: Models, Tasks, Methods and Tools presents a rigorous framework for describing, implementing, and using mixed effects models. With these models, readers can perform parameter estimation and modeling across a whol
Publisher: CRC Press
ISBN: 1482226510
Category : Mathematics
Languages : en
Pages : 380
Book Description
Wide-Ranging Coverage of Parametric Modeling in Linear and Nonlinear Mixed Effects ModelsMixed Effects Models for the Population Approach: Models, Tasks, Methods and Tools presents a rigorous framework for describing, implementing, and using mixed effects models. With these models, readers can perform parameter estimation and modeling across a whol