Microbial Diversity in Time and Space

Microbial Diversity in Time and Space PDF Author: R.R. Colwell
Publisher: Springer
ISBN: 0585340463
Category : Science
Languages : en
Pages : 164

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Book Description
The symposium, "Microbial Diversity in Time and Space," was held in the Sanjo Conference Hall, University of Tokyo, Tokyo, Japan, October 24-26, 1994. The symposium was organized under the auspices of the Japanese Society of Microbial Ecology and co-sponsored by the International Union of Biological Sciences (IUBS), International Union of Microbiological Societies (IUMS), International Committee on Microbial Ecology (ICOME), and the Japanese Society of Ecology. The aim of the symposium was to stress the importance of the global role of microorganisms in developing and maintaining biodiversity. Twenty-four speakers from seven countries presented papers in the symposium and in the workshop, "Microbial Diversity and Cycling of Bioelements," that followed the symposium. Papers presented at the symposium are published in this proceedings. Discussions of the workshop, which were energetic and enthusiastic, are also summarized in this proceedings. The symposium provided an opportunity to address the role of microorganisms in global cycles and as the basic support ofbiodiversity on the planet. Previously unrecognized as both contributing to and sustaining biodiversity, microorganisms are now considered to be primary elements of, and a driving force in, biodiversity. Financial support was provided for the symposium by the CIBA GEIGY Foundation for the Promotion of Science, Naito Foundation, and the Uchida Foundation of the Ocean Research Institute, University of Tokyo. Support from these foundations is gratefully acknowledged. CONTENTS Microbial Biodiversity-Global Aspects ................................. 1 Rita R. Colwell 2. Importance of Community Relationships in Biodiversity ...................

Microbial Diversity in Time and Space

Microbial Diversity in Time and Space PDF Author: R.R. Colwell
Publisher: Springer
ISBN: 0585340463
Category : Science
Languages : en
Pages : 164

Get Book Here

Book Description
The symposium, "Microbial Diversity in Time and Space," was held in the Sanjo Conference Hall, University of Tokyo, Tokyo, Japan, October 24-26, 1994. The symposium was organized under the auspices of the Japanese Society of Microbial Ecology and co-sponsored by the International Union of Biological Sciences (IUBS), International Union of Microbiological Societies (IUMS), International Committee on Microbial Ecology (ICOME), and the Japanese Society of Ecology. The aim of the symposium was to stress the importance of the global role of microorganisms in developing and maintaining biodiversity. Twenty-four speakers from seven countries presented papers in the symposium and in the workshop, "Microbial Diversity and Cycling of Bioelements," that followed the symposium. Papers presented at the symposium are published in this proceedings. Discussions of the workshop, which were energetic and enthusiastic, are also summarized in this proceedings. The symposium provided an opportunity to address the role of microorganisms in global cycles and as the basic support ofbiodiversity on the planet. Previously unrecognized as both contributing to and sustaining biodiversity, microorganisms are now considered to be primary elements of, and a driving force in, biodiversity. Financial support was provided for the symposium by the CIBA GEIGY Foundation for the Promotion of Science, Naito Foundation, and the Uchida Foundation of the Ocean Research Institute, University of Tokyo. Support from these foundations is gratefully acknowledged. CONTENTS Microbial Biodiversity-Global Aspects ................................. 1 Rita R. Colwell 2. Importance of Community Relationships in Biodiversity ...................

Accessing Uncultivated Microorganisms

Accessing Uncultivated Microorganisms PDF Author: Karsten Zengler
Publisher:
ISBN: 9781555814069
Category : Science
Languages : en
Pages : 332

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Book Description
Providing a comprehensive overview and discussing developments in the field, this book details various innovative methods used in microbial ecology and environmental microbiology. It also includes all aspects of microbial diversity from bacteria and fungi to protists.

Microbial Diversity Through Space and Time

Microbial Diversity Through Space and Time PDF Author: Nathan I. Wisnoski
Publisher:
ISBN:
Category : Biotic communities
Languages : en
Pages : 178

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Book Description
Microorganisms are the most diverse organisms on the planet. Understanding the processes by which they are assembled into communities across space and time is a primary goal of microbial ecology. I employed empirical and simulation studies to investigate the effects of dispersal and dormancy on patterns of microbial biodiversity. Microorganisms are thought to have high rates of dispersal, linking communities across space to form a metacommunity. In Chapter 1, I investigated the importance of local- versus regional-scale processes for the assembly of planktonic and sediment-associated bacterial communities in a stream network. Using phylogenetic and taxonomic null models, I found habitat-specific spatial patterns of community assembly in the network, demonstrating the potentially overlooked importance of vertical habitat structure for microbial diversity in stream metacommunities. In Chapter 2, I investigated the roles of biotic interactions and dormancy for the maintenance of microbial biodiversity in University Lake, Indiana, USA. By comparing metabolically active and total diversity in a high-resolution time series, I found evidence that stabilizing biotic interactions allow taxa to persist at the local scale, aided by a dormant seed bank. In Chapter 3, I synthesized the roles of dispersal and dormancy in metacommunity ecology by analyzing empirical data and simulation models. In Chapter 4, I tested predictions about the effects of dormancy and dispersal in University Lake. Dispersal from the neighboring terrestrial ecosystem influenced diversity near the terrestrial-aquatic interface. However, most terrestrial-derived bacteria were apparently dormant, with only a few taxa reaching high abundances in the metabolically active portion of the aquatic community. Taken together, this dissertation provides empirical demonstrations of how dispersal and dormancy affect microbial communities in nature. More broadly, it develops novel insights into the roles of dispersal and dormancy in metacommunities.

The Spatial Distribution of Microbes in the Environment

The Spatial Distribution of Microbes in the Environment PDF Author: Rima Franklin
Publisher: Springer Science & Business Media
ISBN: 1402062168
Category : Science
Languages : en
Pages : 339

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Book Description
This volume highlights recent advances that have contributed to our understanding of spatial patterns and scale issues in microbial ecology. The book brings together research conducted at a range of spatial scales (from μm to km) and in a variety of different types of environments. These topics are addressed in a quantitative manner, and a primer on statistical methods is included. In soil ecosystems, both bacteria and fungi are discussed.

Microbial Diversity

Microbial Diversity PDF Author: Oladele Ogunseitan
Publisher: John Wiley & Sons
ISBN: 1405144483
Category : Science
Languages : en
Pages : 312

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Book Description
This book offers the first comprehensive, in-depth treatment of microbial diversity for undergraduate and graduate students. Using a global approach, Microbial Diversity illustrates the impact of microorganisms on ecological and Earth system phenomena. Accompanied by a devoted website with resources for both instructors and students: www.blackwellpublishing.com/ogunseitan Uses key ecological and global phenomena to show the continuity of microbial contribution. Illustrates the importance of microbial diversity for the understanding of global physiochemical and biological processes. Presents analyses of microscopic, culture, molecular, and phylogenetic systematic methods. Shows the relevance of microbial diversity to global environmental problems, such as climate change and ozone depletion. Features numerous illustrations, including over 60 4-color photographs of microbes.

Microbial Carbonates in Space and Time:

Microbial Carbonates in Space and Time: PDF Author: D.W.J. Bosence
Publisher: Geological Society of London
ISBN: 1862397279
Category : Science
Languages : en
Pages : 310

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Book Description
Microbial carbonates (microbialites) are remarkable sedimentary deposits because they have the longest geological range of any type of biogenic limestones, they form in the greatest range of different sedimentary environments, they oxygenated the Earth’s atmosphere, and they produce and store large volumes of hydrocarbons. This Special Publication provides significant contributions at a pivotal time in our understanding of microbial carbonates, when their economic importance has become established and the results of many research programmes are coming to fruition. It is the first book to focus on the economic aspects of microbialites and in particular the giant pre-salt discoveries offshore Brazil. In addition it contains papers on the processes involved in formation of both modern and ancient microbialites and the diversity of style in microbial carbonate buildups, structures and fabrics in both marine and non-marine settings and throughout the geological record.

Microbial Communities

Microbial Communities PDF Author: Heribert Insam
Publisher: Springer Science & Business Media
ISBN: 3642606946
Category : Science
Languages : en
Pages : 273

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Book Description
Research on decomposer communities of terrestrial ecosystems for a long time has focussed on microbial biomass and gross turnover parameters. Recently, more and more attempts are made to look beyond the biomass, and more specifically determine functions and populations on a smaller scale-in time and space. A multitude of techniques is being improved and developed. Garland and Mills (1991) triggered a series of publications on substrate utilization tests in the field of microbial ecology. Despite several promising results for different applications in different laboratories, many problems concerning the assay and the interpretation of results became evident. After individual discussions on the approach with colleagues from various laboratories we started to plan a workshop on the matter. The response on our first circular was extraordinary, and instead of a small workshop it became a meeting with almost 150 participants. The meeting was named 'Substrate use for characterization of microbial communities in terrestrial ecosystems' (SUBMECO) and was held in Innsbruck, Austria, from Oct. 16-18, 1996. The very focussed scope attracted enthusiastic advocates of the approach, and also serious critics. Some of the topics concerned improvements of current inoculation and incubation techniques, ranging from sample pre-treatment, inoculum density and incubation temperature to statistical data handling. New methods for calculating microbial diversity were proposed, as well as bootstrap methods that allow statistics with many variables on a relatively low number of replicates.

Microbial Diversity and Ecosystem Functioning in Fragmented Rivers Worldwide

Microbial Diversity and Ecosystem Functioning in Fragmented Rivers Worldwide PDF Author: Lunhui Lu
Publisher: Frontiers Media SA
ISBN: 2832539874
Category : Science
Languages : en
Pages : 188

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Book Description
Dams or barriers are among the most significant anthropogenic threats to global freshwater ecosystems, although they provide invaluable services for shipping, hydropower generation, flood protection, and storage of drinking and irrigation water. River fragmentations due to dams and barriers lead the aquatic landscape into isolated river sections, resulting in hydromorphological discontinuities along longitudinal or lateral gradients. Fragmented river habitats are unstable. They experience uncertain disturbances in both time and space with random and complex hydrological and environmental processes, such as water flow, particulate matter sedimentation, reservoir regulation, and terrestrial input. The diversity, composition, functionality, and activity of microbial communities are important indicators of river ecosystem functions and services. Yet, river fragmentations are likely to disrupt and reconstruct microbial communities, redirecting the patterns of biogeochemical cycles of biogenic elements. Methodology, such as mathematical models, is still limited to describing and elucidating microbial processes under changing hydrological environments in the fragmented rivers. Thus, how do the riverine microbial communities and ecosystem functions respond to the fragmentation in rivers? This Research Topic represents a collective focus on microbial ecology, functional diversity, and new microbial modeling in fragmented rivers. We wish to present new findings in community assembly mechanisms, biotic interactions, functional diversity, and ecosystem functioning responses to the river fragmentations. New perspectives will also provide us with deep insights into the ecological effects of river fragmentation. This Research Topic aims to present the original research articles and reviews to provide new findings on microbial diversity and ecosystem functioning in fragmented rivers worldwide. We welcome original research, reviews, mini-reviews, opinions, methods, hypotheses and theories, and perspectives. The directions include but are not limited to the following aspects: - The continuum of the microbial community in responses to dams or barriers. - Novel microbial community assembly mechanisms, functional traits, and biotic interactions in fragmented rivers at local, regional, and global scales. - Functional genes, functional groups, and functional diversity in driving biogenic element cycles. - Mathematical modeling in aquatic microbial ecology.

Modern Soil Microbiology, Second Edition

Modern Soil Microbiology, Second Edition PDF Author: Jan Dirk van Elsas
Publisher: CRC Press
ISBN: 9780824727499
Category : Technology & Engineering
Languages : en
Pages : 704

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Book Description
In the ten years since the publication of Modern Soil Microbiology, the study of soil microbiology has significantly changed, both in the understanding of the diversity and function of soil microbial communities and in research methods. Ideal for students in a variety of disciplines, this second edition provides a cutting-edge examination of a fascinating discipline that encompasses ecology, physiology, genetics, molecular biology, and biotechnology, and makes use of biochemical and biophysical approaches. The chapters cover topics ranging from the fundamental to the applied and describe the use of advanced methods that have provided a great thrust to the discipline of soil microbiology. Using the latest molecular analyses, they integrate principles of soil microbiology with novel insights into the physiology of soil microorganisms. The authors discuss the soil and rhizosphere as habitats for microorganisms, then go on to describe the different microbial groups, their adaptive responses, and their respective processes in interactive and functional terms. The book highlights a range of applied aspects of soil microbiology, including the nature of disease-suppressive soils, the use of biological control agents, biopesticides and bioremediation agents, and the need for correct statistics and experimentation in the analyses of the data obtained from soil systems.

Space, Time and Change: Investigations of Soil Bacterial Diversity and Its Drivers in the Mongolian Steppe

Space, Time and Change: Investigations of Soil Bacterial Diversity and Its Drivers in the Mongolian Steppe PDF Author: Aurora A. MacRae-Crerar
Publisher:
ISBN:
Category :
Languages : en
Pages : 312

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Book Description
Microorganisms are the most diverse life forms on Earth and are the foundation of any ecosystem. As estimates of microbial diversity rapidly increase with advances in sequencing technologies, so does the need to identify the drivers of such overwhelming diversity. This is particularly true in soil—the most biodiverse habitat on the planet and the key component of terrestrial ecosystems, which are being altered by changes in climate and land use. In order to understand the potential consequences of these changes, we conducted a multi-year experiment to test the effects of global change on soil bacterial communities in northern Mongolia, a region where air temperatures have increased by 1.7 °C since 1960, and traditional land-use patterns are shifting with socio-economic changes. Set in the semi-arid steppe, our global change experiment allowed as to evaluate responses to multiple stressors at once over a range of spatial and temporal scales. Over the course of three years, we investigated soil bacterial diversity at two positions (upper and lower) along a south-facing slope and documented the response of these communities to three experimental treatments: a Watering experiment (upper slope only), a Grazing experiment (lower slope only) and a Climate Manipulation experiment (both slopes). We measured diversity using both the number and abundance of distinct bacterial taxa in a soil sample and then correlated these findings with corresponding measurements of biotic and abiotic factors, which included plant richness and biomass, as well as plant available N, pH, soil moisture and soil temperature. We found that temporal and spatial factors explained much of the variation in the bacterial communities. After accounting for temporal and spatial variation, soil moisture content was the primary driver structuring bacterial diversity across the landscape and within experimental treatments. In particular, the effects of climate change on these semi-arid grasslands may act primarily through soil moisture content. Concomitant shifts in key members of the bacterial community may ultimately be bioindicators of a drier future for Mongolia.