Genetic Monitoring of the Upper Columbia River White Sturgeon Conservation Acquaculture Program PDF Download
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Author: Andrea Drauch Schreier
Publisher:
ISBN:
Category : White sturgeon
Languages : en
Pages : 0
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Author: Andrea Drauch Schreier
Publisher:
ISBN:
Category : White sturgeon
Languages : en
Pages : 0
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Author: Andrea Schreier
Publisher:
ISBN:
Category : Hatchery fishes
Languages : en
Pages : 18
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Book Description
"The Kootenai Tribe of Idaho's Native Fish Conservation Aquaculture Program (KTOI NFCAP) has been propagating and releasing white sturgeon to support the endangered Kootenai River white sturgeon population since the early 1990s. Because genetic diversity loss often accompanies captive breeding programs, an important goal of the NFCAP is to preserve the wild population's genetic diversity and protect its adaptive potential. Since 2006, the Genomic Variation Laboratory (GVL) has been conducting genetic monitoring of the Tribe's white sturgeon conservation aquaculture program. We've used neutral microsatellites to measure the amount of genetic diversity present in the wild population and monitor the amount of diversity represented in each year class produced. Individual genotypes determined by the monitoring project can be used as genetic tags for parentage analysis for future NFCAP broodstock management. Parentage analysis can be conducted on potential broodstock of hatchery origin to prevent crossing close relatives (e.g. full siblings). Here we present the results of genetic monitoring of the 2016 year class."--Introduction (page 2).
Author: Joshua Adam Israel
Publisher:
ISBN:
Category :
Languages : en
Pages : 270
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Author: Andrea Marie Schreier
Publisher:
ISBN: 9781267400901
Category :
Languages : en
Pages :
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Book Description
The application of genetic markers to investigate evolutionary and ecological questions about white sturgeon, Acipenser transmontanus, has been limited due to the species' highly duplicated nuclear genome. Here, polysomic microsatellite markers were used to 1) examine the ancestral level of genome duplication in white sturgeon, 2) examine genetic diversity and patterns of population structure within and among drainages across the species' range, and 3) provide genetic monitoring for a conservation aquaculture program sustaining an endangered white sturgeon population. In the first chapter, we followed the inheritance of eight microsatellite markers in 15 families of white sturgeon from a commercial caviar farm to determine whether white sturgeon (~250 chromosomes) should be classified as tetraploid or octoploid. The eight microsatellite loci were detected predominantly in four or eight copies, with one locus observed in>8 copies. Numbers of alleles per locus, patterns of allele transmission, and inference of gene copy number in parents suggested that white sturgeon should be considered ancient octoploids. The discovery of dodecaploid parents and their decaploid offspring in the farm population, confirmed by flow cytometry analysis, indicated that some aspect of sturgeon aquaculture was inducing spontaneous autopolyploidy in white sturgeon. Next, microsatellite markers were applied to examine white sturgeon population structure across the species' range. Population assignment testing was used to determine the origin of white sturgeon sampled in non-natal estuaries, or those not containing a spawning population, to evaluate marine dispersal behavior. The Sacramento-San Joaquin River system was found to contain a single white sturgeon population while the Fraser River exhibited a hierarchical pattern of population structure. Strong levels of genetic divergence were detected above and below a natural barrier, Hells Gate, and fine-scale population substructure was identified above Hells Gate. Population structure in the Columbia River drainage (including the mainstem Columbia and Snake Rivers) was complex and suggested a pattern of isolation by distance. Net downstream gene flow also may have contributed to this pattern, with individuals migrating downstream through impoundments and over barriers with little upstream movement possible. There was no support for the current practice of managing each impounded reach on the Columbia or Snake rivers as a separate population. Lack of population structure within historically continuous river habitat found across the species' range suggested spawning site fidelity in white sturgeon may occur on a regional scale, with local gene flow among geographically proximate spawning sites. Population assignment of samples collected from non-natal estuaries indicated that all populations with ocean access make marine migrations, and individuals did not necessarily originate from the nearest spawning population. Finally, microsatellites were used to conduct genetic monitoring of the Kootenai Tribe of Idaho's conservation aquaculture program (CAP) for the endangered Kootenai River white sturgeon population. Continuous recruitment failure in this population has left it entirely dependent on the CAP for reproduction. A genetic profile database of wild broodstock used in the CAP was created to monitor hatchery-induced genetic changes in the Kootenai River population. Broodstock genotypes also were used to evaluate the accuracy of parentage assignment in the Kootenai River population, as hatchery managers soon will depend on this analysis to prevent inbreeding when most sexually mature adults available for captive breeding will be derived from hatchery production. Numbers of alleles and numbers of alleles per individual per locus were calculated to monitor the amount of wild type genetic diversity captured in broodstock utilized by the CAP. Parentage analysis with 18 microsatellite markers was validated in known hatchery families from the 2010 year class. Genetic diversity in the Kootenai River population was very low relative to other populations examined, likely due to founder effects and genetic drift after isolation from the mainstem Columbia c. 10,000 YBP. In less than one sturgeon generation, 96% of Kootenai River genetic diversity has been captured in broodstock that contributed offspring that survived to release in the Kootenai River and further propagation will likely preserve additional genetic variation. The 18 microsatellite panel improved parentage assignment accuracy and allowed a greater number of assignments relative to the previous panel used for parentage analysis, suggesting that this technique may become a useful tool in the management of this vulnerable population.
Author:
Publisher: Elsevier
ISBN: 0128242698
Category : Science
Languages : en
Pages : 670
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Book Description
Conservation Physiology for the Anthropocene – A Systems Approach, Volume 39B in the Fish Physiology series, is a comprehensive synthesis related to the physiology of fish in the Anthropocene. This volume helps solve knowledge gaps by considering the many ways in which different physiological systems (e.g., sensory physiology, endocrine, cardio-respiratory, bioenergetics, water and ionic balance and homeostasis, locomotion/biomechanics, gene function) and physiological diversity are relevant to the management and conservation of fish and fisheries. Chapters in this release include Using physiology for recovering imperiled species – the Delta smelt, Conservation hatcheries – the Sturgeon story, Aquatic pollutants and stressors, and more. Other sections discuss Fisheries interactions in a multi-stressor world, Environmental change in riverine systems - Amazon basin stressors, Environmental change in lakes and wetlands – East African basin stressors, Coral reef fish in a multi-stressor world, Polar fish in a multi-stressor world, Physiology informs fisheries restoration and habitat management, A physiological perspective on fish passage and entrainment, Invasive species control and management – the sea lamprey story, and On the conservation physiology of fishes for tomorrow. - Includes authoritative contributions from an international board of authors, each with extensive expertise in the conservation physiology of fish - Provides the most up-to-date information on the ways in which different physiological systems are relevant to the management and conservation of fish and fisheries - Presents the latest release in the Fish Physiology series - Identifies how anthropogenic stressors perturb physiological systems - Explores how different physiological systems can be exploited to solve conservation problems
Author: Paul J. Anders
Publisher:
ISBN:
Category : Fish hatcheries
Languages : en
Pages : 13
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"The Kootenai Tribe of Idaho proposed an experimental hatchery program to address the decline of the white sturgeon population in the Kootenai River. Since its inception in 1990, the Kootenai River White Sturgeon Conservation Aquaculture Program has continued to meet its objective of reducing the threat of extinction by providing annual year classes from native broodstock, representing inherent genetic variability in its broodstock and progeny groups, and minimizing the introduction or transmission of pathogens or disease to the wild (source) population. By the late 1990s it became clear that non-hatchery efforts to restore recruitment were failing to counteract the extinction threat. This trend continues to the present (2008). In 2004 updated demographic analysis suggested that as few as 500 adults remained in the population, and triggered increased hatchery production for demographic and genetic conservation. In 2005, a report was prepared describing endangered Kootenai River white sturgeon population trends and causal factors of decline along with program history, protocols, and accomplishments during its first 15 years of operation (KTOI 2006). Subsequent data analysis revealed newly reduced survival rates based on lower recapture frequencies of earlier life stages and release groups of smaller fish. Embryos and free-embryos (yolks-sac larvae) released during several years in the early 2000s have provided no evidence for post-release survival to date. Review of these analyses warranted an updated report to recommend and delineate 2008 operational changes for the program. This report includes a brief program history for perspective, a summary of postrelease survival analyses of early life stages released from the Kootenai Hatchery (Justice and Pyper 2007), and recommends program operational changes for 2008. This report does not address hatchery operations beyond 2008 because the Program is currently involved in Step 1 of the Northwest Power and Conservation Council's 3- Step Hatchery Master Planning process. Recommendations regarding Program facility and operational changes beyond 2008 will be reported in future Master Planning documents."--Program overview.
Author:
Publisher:
ISBN:
Category : Aquatic sciences
Languages : en
Pages : 710
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Author:
Publisher:
ISBN:
Category : White sturgeon
Languages : en
Pages : 24
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Author: E. L. Brannon
Publisher:
ISBN:
Category : White sturgeon
Languages : en
Pages :
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Author:
Publisher:
ISBN:
Category :
Languages : en
Pages : 88
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The geographic area of the genetics study broadly covered the distribution range of sturgeon in the Columbia from below Bonneville Dam at Ilwaco at Lake Roosevelt, the Upper Snake River, and the Kootenai River. The two remote river sections provided data important for enhancement considerations. There was little electrophoretic variation seen among individuals from the Kootenai River. Upper Snake river sturgeon showed a higher percentage of polymorphic loci than the Kootenai fish, but lower than the other areas in the Columbia River we sampled. Sample size was increased in both Lake Roosevelt and at Electrophoretic variation was specific to an individual sampling area in several cases and this shaped our conclusions. The 1987 early life history studies concentrated on the feeding behavior of juvenile sturgeon. The chemostimulant components in prey attractive to sturgeon were examined, and the sensory systems utilized by foraging sturgeon were determined under different environmental conditions. These results were discussed with regard to the environmental changes that have occurred in the Columbia River. Under present river conditions, the feeding mechanism of sturgeon is more restricted to certain prey types, and their feeding range may be limited. In these situations, enhancement measures cannot be undertaken without consideration given to the introduction of food resources that will be readily available under present conditions. 89 refs., 7 figs., 11 tabs.
