Connectivity, Metapopulation Dynamics, and Genetic Structure of Tiger Salamanders in a Heterogeneous Landscape

Connectivity, Metapopulation Dynamics, and Genetic Structure of Tiger Salamanders in a Heterogeneous Landscape PDF Author: Bradley J. Cosentino
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
Metapopulation biology has been integral for understanding the impact of spatial habitat structure on ecological and evolutionary processes. In fragmented landscapes, theory predicts that species occupancy and turnover dynamics depend on habitat area and isolation, and isolation has historically been an important predictor of gene flow. However, metapopulation theory is neutral with respect to the effects of habitat heterogeneity on population processes. Landscape ecology approaches have begun to account for effects of habitat quality and matrix structure on occupancy and gene flow, but few empirical studies have integrated the area-isolation and habitat paradigms to understand metapopulation dynamics and genetic structure in the same system. Here, I employ both approaches to understand the spatial population dynamics and genetic structure of tiger salamanders (Ambystoma tigrinum tigrinum) in an agricultural landscape in Illinois. First, I assessed the degree to which matrix heterogeneity influences A. tigrinum movement behavior. Using a field experiment, I showed that a physiological constraint, desiccation risk, varied significantly among matrix habitats (corn, soybean, forest, prairie). Water loss was greater in corn and prairie than in forest and soybean, indicating that dispersal costs can vary among agricultural crops. To assess whether movement decisions were influenced by desiccation risk, I tracked the movements of individuals released on habitat boundaries for two treatment combinations: soybean-corn, soybean-prairie. I observed that movements were oriented towards soybean in both cases, suggesting that variation in desiccation risk among matrix habitats influenced salamander movement decisions. Next, I examined the effects of area, isolation, and habitat heterogeneity on metapopulation dynamics of A. tigrinum. Emphasis was placed on understanding the role of connectivity in moderating interactions between A. tigrinum and predatory fish. Occupancy and turnover of A. tigrinum were documented in 90 wetlands for three years. Since desiccation risk influenced A. tigrinum movements, I tested whether a connectivity metric that accounted for desiccation was a better predictor of occupancy and turnover than metrics based on Euclidean distance or expert opinion. Occupancy and colonization probabilities were related positively to connectivity and negatively to fish presence. Extinction probability was related positively to fish presence, but extinction risk was low in connected networks, suggesting a rescue effect. A desiccation-informed connectivity metric was a better predictor of colonization probability than alternative metrics, whereas a Euclidean model was the best predicator of occupancy and extinction probabilities. The results indicated that the effect of desiccation risk on individual movement can scale up to influence metapopulation processes, and that the effects of predatory fish on metapopulation dynamics depended on spatial connectivity. Finally, I evaluated whether ecological factors underlying occupancy and turnover were also important predictors of metapopulation genetic structure. Newly colonized populations were more genetically differentiated than established populations, indicating that founder effects influenced genetic structure. However, the degree of genetic differentiation varied spatially. Genetic differentiation was related negatively to both wetland area and spatial connectivity. Differentiation was not strongly related to habitat quality, suggesting that metapopulation factors were more effective at reflecting the historical strength of genetic drift and gene flow than current habitat suitability.

Connectivity, Metapopulation Dynamics, and Genetic Structure of Tiger Salamanders in a Heterogeneous Landscape

Connectivity, Metapopulation Dynamics, and Genetic Structure of Tiger Salamanders in a Heterogeneous Landscape PDF Author: Bradley J. Cosentino
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
Metapopulation biology has been integral for understanding the impact of spatial habitat structure on ecological and evolutionary processes. In fragmented landscapes, theory predicts that species occupancy and turnover dynamics depend on habitat area and isolation, and isolation has historically been an important predictor of gene flow. However, metapopulation theory is neutral with respect to the effects of habitat heterogeneity on population processes. Landscape ecology approaches have begun to account for effects of habitat quality and matrix structure on occupancy and gene flow, but few empirical studies have integrated the area-isolation and habitat paradigms to understand metapopulation dynamics and genetic structure in the same system. Here, I employ both approaches to understand the spatial population dynamics and genetic structure of tiger salamanders (Ambystoma tigrinum tigrinum) in an agricultural landscape in Illinois. First, I assessed the degree to which matrix heterogeneity influences A. tigrinum movement behavior. Using a field experiment, I showed that a physiological constraint, desiccation risk, varied significantly among matrix habitats (corn, soybean, forest, prairie). Water loss was greater in corn and prairie than in forest and soybean, indicating that dispersal costs can vary among agricultural crops. To assess whether movement decisions were influenced by desiccation risk, I tracked the movements of individuals released on habitat boundaries for two treatment combinations: soybean-corn, soybean-prairie. I observed that movements were oriented towards soybean in both cases, suggesting that variation in desiccation risk among matrix habitats influenced salamander movement decisions. Next, I examined the effects of area, isolation, and habitat heterogeneity on metapopulation dynamics of A. tigrinum. Emphasis was placed on understanding the role of connectivity in moderating interactions between A. tigrinum and predatory fish. Occupancy and turnover of A. tigrinum were documented in 90 wetlands for three years. Since desiccation risk influenced A. tigrinum movements, I tested whether a connectivity metric that accounted for desiccation was a better predictor of occupancy and turnover than metrics based on Euclidean distance or expert opinion. Occupancy and colonization probabilities were related positively to connectivity and negatively to fish presence. Extinction probability was related positively to fish presence, but extinction risk was low in connected networks, suggesting a rescue effect. A desiccation-informed connectivity metric was a better predictor of colonization probability than alternative metrics, whereas a Euclidean model was the best predicator of occupancy and extinction probabilities. The results indicated that the effect of desiccation risk on individual movement can scale up to influence metapopulation processes, and that the effects of predatory fish on metapopulation dynamics depended on spatial connectivity. Finally, I evaluated whether ecological factors underlying occupancy and turnover were also important predictors of metapopulation genetic structure. Newly colonized populations were more genetically differentiated than established populations, indicating that founder effects influenced genetic structure. However, the degree of genetic differentiation varied spatially. Genetic differentiation was related negatively to both wetland area and spatial connectivity. Differentiation was not strongly related to habitat quality, suggesting that metapopulation factors were more effective at reflecting the historical strength of genetic drift and gene flow than current habitat suitability.

Landscape Effects on Genetic Structure in Tiger Salamander (Ambystoma Tigrinum Melanostictum) Populations Across the Northern Range of Yellowstone National Park

Landscape Effects on Genetic Structure in Tiger Salamander (Ambystoma Tigrinum Melanostictum) Populations Across the Northern Range of Yellowstone National Park PDF Author: Stephen Spear
Publisher:
ISBN:
Category : Tiger salamander
Languages : en
Pages : 192

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Book Description


Landscape Ecology in Theory and Practice

Landscape Ecology in Theory and Practice PDF Author: Monica G. Turner
Publisher: Springer
ISBN: 1493927949
Category : Science
Languages : en
Pages : 499

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Book Description
This work provides in-depth analysis of the origins of landscape ecology and its close alignment with the understanding of scale, the causes of landscape pattern, and the interactions of spatial pattern with a variety of ecological processes. The text covers the quantitative approaches that are applied widely in landscape studies, with emphasis on their appropriate use and interpretation. The field of landscape ecology has grown rapidly during this period, its concepts and methods have matured, and the published literature has increased exponentially. Landscape research has enhanced understanding of the causes and consequences of spatial heterogeneity and how these vary with scale, and they have influenced the management of natural and human-dominated landscapes. Landscape ecology is now considered mainstream, and the approaches are widely used in many branches of ecology and are applied not only in terrestrial settings but also in aquatic and marine systems. In response to these rapid developments, an updated edition of Landscape Ecology in Theory and Practice provides a synthetic overview of landscape ecology, including its development, the methods and techniques that are employed, the major questions addressed, and the insights that have been gained.”

Conservation and Landscape Ecology of California Tiger Salamanders

Conservation and Landscape Ecology of California Tiger Salamanders PDF Author: Christopher Searcy
Publisher:
ISBN: 9781267029751
Category :
Languages : en
Pages :

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Book Description
Organisms are not uniformly distributed across the landscape. It is therefore important to understand how organisms are distributed since this reveals aspects of their demography, mobility, resource requirements, and how they respond to climatic variation. It is also of critical importance when studying threatened taxa since knowing which habitat is preferred is essential for appropriate conservation and management. Landscape ecology is the study of this spatial heterogeneity and the patterns that emerge from it, and I here apply it to California tiger salamanders (Ambystoma californiense) both to better understand their ecology and to improve their conservation. In Chapter One, I discuss how spatial heterogeneity can be used to inform conservation practices, particularly the assessment of mitigation credits. In Chapter Two, I calculate the total amount of habitat that California tiger salamanders occupy around each of their breeding ponds. In Chapter Three, I compare this overall habitat requirement to that of other salamander species (in terms of average migration distance), identify the microhabitat preferences of California tiger salamanders within this total habitat area, and examine the temporal and between pond variation in their spatial distribution.

Linkages in the Landscape

Linkages in the Landscape PDF Author: Andrew F. Bennett
Publisher: IUCN
ISBN: 2831707447
Category : Corridors
Languages : en
Pages : 261

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Book Description
The loss and fragmentation of natural habitats is one of the major issues in wildlife management and conservation. Habitat "corridors" are sometimes proposed as an important element within a conservation strategy. Examples are given of corridors both as pathways and as habitats in their own right. Includes detailed reviews of principles relevant to the design and management of corridors, their place in regional approaches to conservation planning, and recommendations for research and management.

The Wetland Book

The Wetland Book PDF Author: C. Max Finlayson
Publisher: Springer
ISBN: 9789048134939
Category : Science
Languages : en
Pages : 1546

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Book Description
In discussion with Ramsar’s Max Finlayson and Nick Davidson, and several members of the Society of Wetland Scientists, Springer is proposing the development of a new Encyclopedia of Wetlands, a comprehensive resource aimed at supporting the trans- and multidisciplinary research and practice which is inherent to this field. Aware both that wetlands research is on the rise and that researchers and students are often working or learning across several disciplines, we are proposing a readily accessible online and print reference which will be the first port of call on key concepts in wetlands science and management. This easy-to-follow reference will allow multidisciplinary teams and transdisciplinary individuals to look up terms, access further details, read overviews on key issues and navigate to key articles selected by experts.

Microsatellites

Microsatellites PDF Author: David B. Goldstein
Publisher: Oxford University Press on Demand
ISBN: 9780198504078
Category : Science
Languages : en
Pages : 352

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Book Description
Microsatellites are short stretches of repeated DNA, found in most genomes, that show exceptional variability in humans and most other species. This variability has made microsatellites the genetic marker of choice for most applications, including genetic mapping and studies of the evolutionary connections between species and populations. This book brings together an international group of scientists currently working in microsatellites. Their contributions provide a detailed descriptionof microsatellite biology, focusing on their mutation properties, generation, decay, and possible functional roles. They introduce the theoretical models that underpin the most popular methods for analysing the information that microsatellites can yield, including methods for estimating coalescent times, population divergences, and migration. Finally, the book describes the various ways in which the potential of microsatellites is being harnessed in a range of applications including medical genetics, forensics, genetic mapping, the analysis of human evolution, and conservation genetics.

The Wetland Book

The Wetland Book PDF Author: C. Max Finlayson
Publisher: Springer
ISBN: 9789400740006
Category : Science
Languages : en
Pages : 0

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Book Description
The Wetland Book is a comprehensive resource aimed at supporting the trans- and multidisciplinary research and practice which is inherent to this field. Aware both that wetlands research is on the rise and that researchers and students are often working or learning across several disciplines, The Wetland Book is a readily accessible online and print reference which will be the first port of call on key concepts in wetlands science and management. This easy-to-follow reference will allow multidisciplinary teams and transdisciplinary individuals to look up terms, access further details, read overviews on key issues and navigate to key articles selected by experts.

Landscape Genetics

Landscape Genetics PDF Author: Niko Balkenhol
Publisher: John Wiley & Sons
ISBN: 1118525299
Category : Science
Languages : en
Pages : 298

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Book Description
LANDSCAPE GENETICS: CONCEPTS, METHODS, APPLICATIONS LANDSCAPE GENETICS: CONCEPTS, METHODS, APPLICATIONS Edited by Niko Balkenhol, Samuel A. Cushman, Andrew T. Storfer, Lisette P. Waits Landscape genetics is an exciting and rapidly growing field, melding methods and theory from landscape ecology and population genetics to address some of the most challenging and urgent ecological and evolutionary topics of our time. Landscape genetic approaches now enable researchers to study in detail how environmental complexity in space and time affect gene flow, genetic drift, and local adaptation. However, learning about the concepts and methods underlying the field remains challenging due to the highly interdisciplinary nature of the field, which relies on topics that have traditionally been treated separately in classes and textbooks. In this edited volume, some of the leading experts in landscape genetics provide the first comprehensive introduction to underlying concepts, commonly used methods, and current and future applications of landscape genetics. Consistent with the interdisciplinary nature of the field, the book includes textbook-like chapters that synthesize fundamental concepts and methods underlying landscape genetics (Part 1), chapters on advanced topics that deserve a more in-depth treatment (Part 2), and chapters illustrating the use of concepts and methods in empirical applications (Part 3). Aimed at beginning landscape geneticists and experienced researchers alike, this book will be helpful for all scientists and practitioners interested in learning, teaching, and applying landscape genetics.

Ecology of Fragmented Landscapes

Ecology of Fragmented Landscapes PDF Author: Sharon K. Collinge
Publisher: JHU Press
ISBN: 0801891388
Category : Nature
Languages : en
Pages : 358

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Book Description
Ask airline passengers what they see as they gaze out the window, and they will describe a fragmented landscape: a patchwork of desert, woodlands, farmlands, and developed neighborhoods. Once-contiguous forests are now subdivided; tallgrass prairies that extended for thousands of miles are now crisscrossed by highways and byways. Whether the result of naturally occurring environmental changes or the product of seemingly unchecked human development, fractured lands significantly impact the planet’s biological diversity. In Ecology of Fragmented Landscapes, Sharon K. Collinge defines fragmentation, explains its various causes, and suggests ways that we can put our lands back together. Researchers have been studying the ecological effects of dismantling nature for decades. In this book, Collinge evaluates this body of research, expertly synthesizing all that is known about the ecology of fragmented landscapes. Expanding on the traditional coverage of this topic, Collinge also discusses disease ecology, restoration, conservation, and planning. Not since Richard T. T. Forman's classic Land Mosaics has there been a more comprehensive examination of landscape fragmentation. Ecology of Fragmented Landscapes is critical reading for ecologists, conservation biologists, and students alike.