Applications of Fish Scale Analysis to Understand Growth Dynamics of Fish Populations

Applications of Fish Scale Analysis to Understand Growth Dynamics of Fish Populations PDF Author: Ryan James Taylor
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
The use of hard structures to derive ecological information about fish populations is a fundamental tool in fisheries assessment, specifically the back-calculation of fish lengths. This study highlights the potential errors associated with correction factors (c) because of poor sampling and provides a validation of (c) values. In addition, classical fisheries assumptions about the relationship between scale radius and fish body length were tested. As a result, variability or error of correction factors can be reduced by having a minimum of 30 samples with at least 4 age classes represented. Alternatively the (c) provided can be used as a standard (c) factor for each species, eliminating the variance caused by poor sampling. Finally, the development of standard intercept values (based on observation of juvenile fish) should be promoted to replace or validate mathematically derived (c). The ability to accurately determine the age and growth of fish is an important tool in fishery biology and therefore it is fundamental to this work that all steps should be taken to increase the accuracy of back-calculated length-at-age data and account for size when fish lay down scales. To account for potential error associated with a correction factor, larval fish were routinely sampled to identify patterns of squamation, providing preliminary reference data for correction factors used in back-calculation of fish length-at-age. Determination of the length at squamation for more specimens will allow for the derivation of standard correction factors for each species that can be used across the species' distribution. Geometric morphometric (GM) analysis of fish scales has been shown to be a good discriminator of genera using a fixed landmark approach. However, freshwater fish scales are often irregular in shape; therefore it is not possible to identify identical locations on all individuals. This study provides evidence that scale morphology can be used to discriminate riverine fish species. The analysis of fish scale morphology is inexpensive, quick, non-destructive, and informative and could easily be added to existing monitoring programmes. This study highlights the potentially important and opportunistic information that can be gained from the GM analysis of fish scales. It is therefore anticipated that this study will be fundamental in shaping future fish population assessments. It is recognised amongst scientists that fish growth rates vary across a catchment, with species typically achieving greater growth rates in their 'preferred' habitats. Similarly, previous authors have identified that growth variation exists for different species and populations. This study has found that the geographic location of a river/region influences the growth rates of freshwater fishes commonly found in England. The method of constructing regional growth curves and subsequent statistical analysis discussed in this study should be adopted by fisheries scientists, because current national growth rates may be unachievable in specific regions. Furthermore, current national curves are inappropriate for growth and population analysis because they may be biased by an individual river and/or region. This study is one of the few studies to examine the differences between regional recruitment success, and found similarities and differences at both the regional and national level. With recruitment success a key requirement of monitoring fish populations under the WFD, it is hoped the information provided here will aid fisheries scientists to understand the factors affecting regional and national recruitment success. Studies on the impact of climate change on fish populations have typically focused on suggesting, rather than predicting, the effects on lentic species rather than lotic species. Furthermore, these studies often deal with American rather than European ecosystems. To address this, predicted changes in the climate of the UK were used to model likely influences on fish populations, expressed as the length of young of year (YOY) fish achieved by the end of the first growth period (May-September), juvenile and adult growth (annual growth increment, AGI) and recruitment success (year class strength, YCS), for three cyprinid fish. This study found that climate change is likely to increase the propensity for cyprinid fish to thrive, although the exact mechanism will depend on inter-annual variability in temperature rises and the timing of flow events. Notwithstanding the limitations of this study, it provides ecologists with a greater understanding of climate change and its potential impact on European, lotic fish populations.

Applications of Fish Scale Analysis to Understand Growth Dynamics of Fish Populations

Applications of Fish Scale Analysis to Understand Growth Dynamics of Fish Populations PDF Author: Ryan James Taylor
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
The use of hard structures to derive ecological information about fish populations is a fundamental tool in fisheries assessment, specifically the back-calculation of fish lengths. This study highlights the potential errors associated with correction factors (c) because of poor sampling and provides a validation of (c) values. In addition, classical fisheries assumptions about the relationship between scale radius and fish body length were tested. As a result, variability or error of correction factors can be reduced by having a minimum of 30 samples with at least 4 age classes represented. Alternatively the (c) provided can be used as a standard (c) factor for each species, eliminating the variance caused by poor sampling. Finally, the development of standard intercept values (based on observation of juvenile fish) should be promoted to replace or validate mathematically derived (c). The ability to accurately determine the age and growth of fish is an important tool in fishery biology and therefore it is fundamental to this work that all steps should be taken to increase the accuracy of back-calculated length-at-age data and account for size when fish lay down scales. To account for potential error associated with a correction factor, larval fish were routinely sampled to identify patterns of squamation, providing preliminary reference data for correction factors used in back-calculation of fish length-at-age. Determination of the length at squamation for more specimens will allow for the derivation of standard correction factors for each species that can be used across the species' distribution. Geometric morphometric (GM) analysis of fish scales has been shown to be a good discriminator of genera using a fixed landmark approach. However, freshwater fish scales are often irregular in shape; therefore it is not possible to identify identical locations on all individuals. This study provides evidence that scale morphology can be used to discriminate riverine fish species. The analysis of fish scale morphology is inexpensive, quick, non-destructive, and informative and could easily be added to existing monitoring programmes. This study highlights the potentially important and opportunistic information that can be gained from the GM analysis of fish scales. It is therefore anticipated that this study will be fundamental in shaping future fish population assessments. It is recognised amongst scientists that fish growth rates vary across a catchment, with species typically achieving greater growth rates in their 'preferred' habitats. Similarly, previous authors have identified that growth variation exists for different species and populations. This study has found that the geographic location of a river/region influences the growth rates of freshwater fishes commonly found in England. The method of constructing regional growth curves and subsequent statistical analysis discussed in this study should be adopted by fisheries scientists, because current national growth rates may be unachievable in specific regions. Furthermore, current national curves are inappropriate for growth and population analysis because they may be biased by an individual river and/or region. This study is one of the few studies to examine the differences between regional recruitment success, and found similarities and differences at both the regional and national level. With recruitment success a key requirement of monitoring fish populations under the WFD, it is hoped the information provided here will aid fisheries scientists to understand the factors affecting regional and national recruitment success. Studies on the impact of climate change on fish populations have typically focused on suggesting, rather than predicting, the effects on lentic species rather than lotic species. Furthermore, these studies often deal with American rather than European ecosystems. To address this, predicted changes in the climate of the UK were used to model likely influences on fish populations, expressed as the length of young of year (YOY) fish achieved by the end of the first growth period (May-September), juvenile and adult growth (annual growth increment, AGI) and recruitment success (year class strength, YCS), for three cyprinid fish. This study found that climate change is likely to increase the propensity for cyprinid fish to thrive, although the exact mechanism will depend on inter-annual variability in temperature rises and the timing of flow events. Notwithstanding the limitations of this study, it provides ecologists with a greater understanding of climate change and its potential impact on European, lotic fish populations.

Stock Assessment

Stock Assessment PDF Author: Vincent F. Gallucci
Publisher: CRC Press
ISBN: 1000940969
Category : Science
Languages : en
Pages : 538

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Book Description
Stock Assessment: Quantitative Methods and Applications for Small Scale Fisheries is a book about stock assessment as it is practiced. It focuses on applications for small scale or artisanal fisheries in developing countries, however it is not limited in applicability to tropical waters and should also be considered a resource for students of temperate fishery management problems. It incorporates a careful sample design, various mathematical models as a basis for predicting consequences for stock exploitation, and discusses the impact of exploitation on non-targeted species. This was a unique concept involving a collaborative effort between U.S. and host country scientists to address issues of regional and global concern through innovative research. Unlike other books on stock assessment that show mathematical models, this is the only book of its kind that discusses how an assessment is carried out. It looks at the field as a whole and includes sampling, age determination and acoustics. The book represents the culmination of a nine-year program financed by the United States Agency for International Development to provide new or improved methods of stock assessment for artisanal fisheries.

Understanding the Effects of Growth and Size-at-age Variation on the Dynamics of Fish Populations

Understanding the Effects of Growth and Size-at-age Variation on the Dynamics of Fish Populations PDF Author: Christine Stawitz
Publisher:
ISBN:
Category :
Languages : en
Pages : 143

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Book Description
Understanding drivers of populations is of tantamount importance across a broad scale of researchers, from theoretical ecologists to tactical resource managers. Drivers may be internal feedbacks (density-dependent) or external (density-independent) processes, such as changes in prey, predator, or competitor populations, or environmental stochasticity. In a closed population, these drivers affect populations by altering demographic rates (i.e. mortality, reproduction, somatic growth). Although there is increasing evidence that no demographic rates are static, at least in patchy and stochastic aquatic environments, it is an ongoing question to identify the most important types and scale of variation for population dynamics models. In this dissertation, I seek to quantify the magnitude and effect of growth and size-at-age variation on fish population dynamics using a variety of different modeling techniques. In the first chapter, I use a state-space statistical model to quantify the magnitude and type of temporal size-at-age variation experienced by a number of Pacific groundfish populations. In the second chapter, I use these estimates of growth variation, along with parameters taken from fisheries stock assessment models, to illustrate how both growth and recruitment variation may introduce fluctuations into simulated populations with otherwise static demographic rates. In the third chapter, I use an integrated analysis model to simulate and estimate patterns of growth variation in Petrale sole (Eopsetta jordani) to examine the effect of growth misspecification on estimates of population status. In the final chapter, I adapt a size-structured ecosystem model to Tonlé Sap Lake, Cambodia, and explore ways to validate model accuracy in a species-rich, data-poor ecosystem. This work highlights the importance of accounting for multiple types of demographic stochasticity across life history type and how appropriate model complexity scales with data quality and quantity.

Stock Identification Methods

Stock Identification Methods PDF Author: Steven X. Cadrin
Publisher: Academic Press
ISBN: 0123972582
Category : Technology & Engineering
Languages : en
Pages : 589

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Book Description
Stock Identification Methods, 2e, continues to provide a comprehensive review of the various disciplines used to study the population structure of fishery resources. It represents the worldwide experience and perspectives of experts on each method, assembled through a working group of the International Council for the Exploration of the Sea. The book is organized to foster interdisciplinary analyses and conclusions about stock structure, a crucial topic for fishery science and management. Technological advances have promoted the development of stock identification methods in many directions, resulting in a confusing variety of approaches. Based on central tenets of population biology and management needs, this valuable resource offers a unified framework for understanding stock structure by promoting an understanding of the relative merits and sensitivities of each approach. - Describes 18 distinct approaches to stock identification grouped into sections on life history traits, environmental signals, genetic analyses, and applied marks - Features experts' reviews of benchmark case studies, general protocols, and the strengths and weaknesses of each identification method - Reviews statistical techniques for exploring stock patterns, testing for differences among putative stocks, stock discrimination, and stock composition analysis - Focuses on the challenges of interpreting data and managing mixed-stock fisheries

Notes on the Use of Theoretical Models in the Study of the Dynamics of Exploited Fish Populations

Notes on the Use of Theoretical Models in the Study of the Dynamics of Exploited Fish Populations PDF Author: R. J. H. Beverton
Publisher:
ISBN:
Category : Fish populations
Languages : en
Pages : 164

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Book Description


Mathematical Analysis of Fish Stock Dynamics

Mathematical Analysis of Fish Stock Dynamics PDF Author: Elizabeth F. Edwards
Publisher:
ISBN:
Category : Technology & Engineering
Languages : en
Pages : 234

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Book Description


Stock Assessment

Stock Assessment PDF Author: Vincent F. Gallucci
Publisher: CRC Press
ISBN: 9781566701518
Category : Science
Languages : en
Pages : 544

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Book Description
Stock Assessment: Quantitative Methods and Applications for Small Scale Fisheries is a book about stock assessment as it is practiced. It focuses on applications for small scale or artisanal fisheries in developing countries, however it is not limited in applicability to tropical waters and should also be considered a resource for students of temperate fishery management problems. It incorporates a careful sample design, various mathematical models as a basis for predicting consequences for stock exploitation, and discusses the impact of exploitation on non-targeted species. This was a unique concept involving a collaborative effort between U.S. and host country scientists to address issues of regional and global concern through innovative research. Unlike other books on stock assessment that show mathematical models, this is the only book of its kind that discusses how an assessment is carried out. It looks at the field as a whole and includes sampling, age determination and acoustics. The book represents the culmination of a nine-year program financed by the United States Agency for International Development to provide new or improved methods of stock assessment for artisanal fisheries.

Dynamic Geography of Marine Fish Populations

Dynamic Geography of Marine Fish Populations PDF Author: Alec D. MacCall
Publisher: University of Washington Press
ISBN:
Category : Nature
Languages : en
Pages : 176

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Book Description


Notes on the Use of Theoretical Models in the Study of the Dynamics of Exploited Fish Populations

Notes on the Use of Theoretical Models in the Study of the Dynamics of Exploited Fish Populations PDF Author: R. J. H. Beverton
Publisher:
ISBN:
Category : Fish populations
Languages : en
Pages : 206

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Book Description


The Effects of Life History on Time Scales of Variability in Fish Populations, and the Effects of Epistemological Scales on Fishing Community Responses to Climate-driven Shifts in Fish Distributions

The Effects of Life History on Time Scales of Variability in Fish Populations, and the Effects of Epistemological Scales on Fishing Community Responses to Climate-driven Shifts in Fish Distributions PDF Author: Mikaela Marie Provost
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
This research investigates the sensitivity of fluctuations in harvested fish populations to environmental change and the implications for fisheries management. Understanding the mechanisms that cause populations to fluctuate has been a central focus in ecology and fisheries for decades. Recent research shows that age-structured density dependent populations are increasingly viewed as filters of environmental noise, and that observed fluctuations in population abundance is a function of both the age structure of the population and the spectrum of the environment. Filtering of stochastic noise by age structured populations often results in population sizes fluctuating over two characteristic time scales: a short time scale equal to the mean population spawning age (i.e., generation frequencies) and at long time scales (i.e., decades or longer), a phenomenon called cohort resonance. Chapter 1 investigates what aspects of population life history determine the different amounts of sensitivity at these two timescales. I use five decades of cod surveys to parameterize stochastic age-structured models to describe time scales of sensitivity for 16 cod populations in the North Atlantic that vary in their life history. This analysis shows that total sensitivity (i.e., sensitivity to all frequencies of environmental noise) is highest when populations are at low equilibrium levels of egg production regardless of life history. However, at very low equilibrium levels, long-lived cod populations have greater sensitivity overall compared to short-lived cod populations. The fraction of total sensitivity concentrated to high frequencies in the environment (the short time scale corresponding to mean spawning age) is primarily a function of life history; cod populations with the smallest coefficient of variation in the spawning biomass over age distribution are most sensitive to high frequencies in the environment compared to populations with large values of coefficient of variation. These results suggest that changes in age structure, such as through age truncation through fishing, will change how sensitive populations are to environmental noise over short time scales and that populations persistently depressed to low equilibrium levels will experience much higher sensitivity to environmental noise overall. Where chapter 1 investigates aspects of age structure on cohort resonance in populations, chapter 2 focuses on the implications of cohort resonance for fisheries management in a changing climate. Fishery stock assessments often incorporate the effects of environmental stochasticity on recruitment survival, assuming the environment is white noise. However, in the California Current environmental variation is dominated by El Niño-Southern Oscillation (ENSO) cycles and frequency of these cycles is predicted to increase with climate change. Chapter 2 investigates the effect of different types of environmental noise on the probability of overfishing in 12 harvested species in the eastern Pacific. Using stochastic age-structured density-dependent models, with four environmental noise scenarios: white noise, frequency of historical ENSO cycles, ENSO cycles sped up to twice as fast, and ENSO cycles slowed to half the speed of historical frequencies. I show that stock assessments may be missing an important source of uncertainty when setting harvest limits to minimize the probability of overfishing by ignoring the spectrum of the environment in the California Current. I also show that the risk of overfishing, for the species in this study, may decrease if ENSO cycles speed up as is predicted with climate change. Chapter 3 shifts the focus from population dynamics of fish to the response of fishers to climate-driven shifts in the geographic distribution of fish populations. Since fisheries are complex social-ecological systems, understanding the overall impact of climate-driven shifts on small-scale and commercial fisheries requires knowledge from both both ecological and social science perspectives. One specific way that ecological and social approaches to understanding fisheries vary is the geographic scope or the spatial unit of analysis (e.g., a fishing community, a management region, or an ocean basin). A mismatch in the spatial scale of analysis used to study ecological processes and the social institutions responsible for managing these ecological resources has resulted in the mismanagement of marine ecosystems in some cases. Just how widespread is the problem of spatial scale mismatch in fisheries research between the ecological and social sciences? Chapter 3 synthesizes the literature on climate-drive shifts to show that fisheries research is lacking in multi-scale studies, and social and ecological approaches to studying fisheries are often segregated geographically. In a case study of Yellowtail Flounder (Limanda ferruginea) on the US East Coast, the choice of spatial scale can make a substantial difference on the patterns of observed latitudinal change. These findings show that the spatial scales at which change is studied has major implications for how researchers, resource users, policymakers, and the public perceive and respond to change. Coherence in the scientific information provided to managers and policymakers can allow them to make more effective decisions when managing climate driven shifts in fisheries.