R for Medicine and Biology

R for Medicine and Biology PDF Author: Paul D. Lewis
Publisher: Jones & Bartlett Learning
ISBN: 1449633145
Category : Science
Languages : en
Pages : 422

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Book Description
R is quickly becoming the number one choice for users in the fields of biology, medicine, and bioinformatics as their main means of storing, processing, sharing, and analyzing biomedical data. R for Medicine and Biology is a step-by-step guide through the use of the statistical environment R, as used in a biomedical domain. Ideal for healthcare professionals, scientists, informaticists, and statistical experts, this resource will provide even the novice programmer with the tools necessary to process and analyze their data using the R environment. Introductory chapters guide readers in how to obtain, install, and become familiar with R and provide a clear introduction to the programming language using numerous worked examples. Later chapters outline how R can be used, not just for biomedical data analysis, but also as an environment for the processing, storing, reporting, and sharing of data and results. The remainder of the book explores areas of R application to common domains of biomedical informatics, including imaging, statistical analysis, data mining/modeling, pathology informatics, epidemiology, clinical trials, and metadata usage. R for Medicine and Biology will provide you with a single desk reference for the R environment and its many capabilities.

R for Medicine and Biology

R for Medicine and Biology PDF Author: Paul D. Lewis
Publisher: Jones & Bartlett Learning
ISBN: 1449633145
Category : Science
Languages : en
Pages : 422

Get Book Here

Book Description
R is quickly becoming the number one choice for users in the fields of biology, medicine, and bioinformatics as their main means of storing, processing, sharing, and analyzing biomedical data. R for Medicine and Biology is a step-by-step guide through the use of the statistical environment R, as used in a biomedical domain. Ideal for healthcare professionals, scientists, informaticists, and statistical experts, this resource will provide even the novice programmer with the tools necessary to process and analyze their data using the R environment. Introductory chapters guide readers in how to obtain, install, and become familiar with R and provide a clear introduction to the programming language using numerous worked examples. Later chapters outline how R can be used, not just for biomedical data analysis, but also as an environment for the processing, storing, reporting, and sharing of data and results. The remainder of the book explores areas of R application to common domains of biomedical informatics, including imaging, statistical analysis, data mining/modeling, pathology informatics, epidemiology, clinical trials, and metadata usage. R for Medicine and Biology will provide you with a single desk reference for the R environment and its many capabilities.

Bioinformatics and Computational Biology Solutions Using R and Bioconductor

Bioinformatics and Computational Biology Solutions Using R and Bioconductor PDF Author: Robert Gentleman
Publisher: Springer Science & Business Media
ISBN: 0387293620
Category : Computers
Languages : en
Pages : 478

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Book Description
Full four-color book. Some of the editors created the Bioconductor project and Robert Gentleman is one of the two originators of R. All methods are illustrated with publicly available data, and a major section of the book is devoted to fully worked case studies. Code underlying all of the computations that are shown is made available on a companion website, and readers can reproduce every number, figure, and table on their own computers.

Systematic

Systematic PDF Author: James R. Valcourt
Publisher: Bloomsbury Publishing USA
ISBN: 1632860317
Category : Science
Languages : en
Pages : 289

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Book Description
A brilliant young scientist introduces us to the fascinating field that is changing our understanding of how the body works and the way we can approach healing. SYSTEMATIC is the first book to introduce general readers to systems biology, which is improving medical treatments and our understanding of living things. In traditional bottom-up biology, a biologist might spend years studying how a single protein works, but systems biology studies how networks of those proteins work together--how they promote health and how to remedy the situation when the system isn't functioning properly. Breakthroughs in systems biology became possible only when powerful computer technology enabled researchers to process massive amounts of data to study complete systems, and has led to progress in the study of gene regulation and inheritance, cancer drugs personalized to an individual's genetically unique tumor, insights into how the brain works, and the discovery that the bacteria and other microbes that live in the gut may drive malnutrition and obesity. Systems biology is allowing us to understand more complex phenomena than ever before. In accessible prose, SYSTEMATIC sheds light not only on how systems within the body work, but also on how research is yielding new kinds of remedies that enhance and harness the body's own defenses.

Handbook of Physics in Medicine and Biology

Handbook of Physics in Medicine and Biology PDF Author: Robert Splinter
Publisher: CRC Press
ISBN: 142007525X
Category : Science
Languages : en
Pages : 550

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Book Description
In considering ways that physics has helped advance biology and medicine, what typically comes to mind are the various tools used by researchers and clinicians. We think of the optics put to work in microscopes, endoscopes, and lasers; the advanced diagnostics permitted through magnetic, x-ray, and ultrasound imaging; and even the nanotools, that a

Medical Cell Biology

Medical Cell Biology PDF Author: Steven R. Goodman
Publisher: Academic Press
ISBN: 0080919316
Category : Science
Languages : en
Pages : 335

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Book Description
Medical Cell Biology, Third Edition, focuses on the scientific aspects of cell biology important to medical students, dental students, veterinary students, and prehealth undergraduates. With its National Board-type questions, this book is specifically designed to prepare students for this exam. The book maintains a concise focus on eukaryotic cell biology as it relates to human and animal disease, all within a manageable 300-page format. This is accomplished by explaining general cell biology principles in the context of organ systems and disease. This updated version contains 60% new material and all new clinical cases. New topics include apoptosis and cell death from a neural perspective; signal transduction as it relates to normal and abnormal heart function; and cell cycle and cell division related to cancer biology. - 60% New Material! - New Topics include: - Apoptosis and cell dealth from a neural perspective - Signal transduction as it relates to normal and abnormal heart function - Cell cycle and cell division related to cancer biology - All new clinical cases - Serves as a prep guide to the National Medical Board Exam with sample board-style questions (using Exam Master(R) technology): www.exammaster.com - Focuses on eukaryotic cell biology as it related to human disease, thus making the subject more accessible to pre-med and pre-health students

Mixed Effects Models and Extensions in Ecology with R

Mixed Effects Models and Extensions in Ecology with R PDF Author: Alain Zuur
Publisher: Springer Science & Business Media
ISBN: 0387874585
Category : Science
Languages : en
Pages : 579

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Book Description
This book discusses advanced statistical methods that can be used to analyse ecological data. Most environmental collected data are measured repeatedly over time, or space and this requires the use of GLMM or GAMM methods. The book starts by revising regression, additive modelling, GAM and GLM, and then discusses dealing with spatial or temporal dependencies and nested data.

Computational Genomics with R

Computational Genomics with R PDF Author: Altuna Akalin
Publisher: CRC Press
ISBN: 1498781861
Category : Mathematics
Languages : en
Pages : 463

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Book Description
Computational Genomics with R provides a starting point for beginners in genomic data analysis and also guides more advanced practitioners to sophisticated data analysis techniques in genomics. The book covers topics from R programming, to machine learning and statistics, to the latest genomic data analysis techniques. The text provides accessible information and explanations, always with the genomics context in the background. This also contains practical and well-documented examples in R so readers can analyze their data by simply reusing the code presented. As the field of computational genomics is interdisciplinary, it requires different starting points for people with different backgrounds. For example, a biologist might skip sections on basic genome biology and start with R programming, whereas a computer scientist might want to start with genome biology. After reading: You will have the basics of R and be able to dive right into specialized uses of R for computational genomics such as using Bioconductor packages. You will be familiar with statistics, supervised and unsupervised learning techniques that are important in data modeling, and exploratory analysis of high-dimensional data. You will understand genomic intervals and operations on them that are used for tasks such as aligned read counting and genomic feature annotation. You will know the basics of processing and quality checking high-throughput sequencing data. You will be able to do sequence analysis, such as calculating GC content for parts of a genome or finding transcription factor binding sites. You will know about visualization techniques used in genomics, such as heatmaps, meta-gene plots, and genomic track visualization. You will be familiar with analysis of different high-throughput sequencing data sets, such as RNA-seq, ChIP-seq, and BS-seq. You will know basic techniques for integrating and interpreting multi-omics datasets. Altuna Akalin is a group leader and head of the Bioinformatics and Omics Data Science Platform at the Berlin Institute of Medical Systems Biology, Max Delbrück Center, Berlin. He has been developing computational methods for analyzing and integrating large-scale genomics data sets since 2002. He has published an extensive body of work in this area. The framework for this book grew out of the yearly computational genomics courses he has been organizing and teaching since 2015.

Goodman's Medical Cell Biology

Goodman's Medical Cell Biology PDF Author: Steven R. Goodman
Publisher: Academic Press
ISBN: 0128179287
Category : Science
Languages : en
Pages : 444

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Book Description
Goodman's Medical Cell Biology, Fourth Edition, has been student tested and approved for decades. This updated edition of this essential textbook provides a concise focus on eukaryotic cell biology (with a discussion of the microbiome) as it relates to human and animal disease. This is accomplished by explaining general cell biology principles in the context of organ systems and disease.This new edition is richly illustrated in full color with both descriptive schematic diagrams and laboratory findings obtained in clinical studies. This is a classic reference for moving forward into advanced study. - Includes five new chapters: Mitochondria and Disease, The Cell Biology of the Immune System, Stem Cells and Regenerative Medicine, Omics, Informatics, and Personalized Medicine, and The Microbiome and Disease - Contains over 150 new illustrations, along with revised and updated illustrations - Maintains the same vision as the prior editions, teaching cell biology in a medically relevant manner in a concise, focused textbook

Fractals in Biology and Medicine

Fractals in Biology and Medicine PDF Author: Gabriele A. Losa
Publisher: Birkhäuser
ISBN: 3034881193
Category : Mathematics
Languages : en
Pages : 354

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Book Description
In March 2000 leading scientists gathered at the Centro Seminariale Monte Verità, Ascona, Switzerland, for the Third International Symposium on "Fractals 2000 in Biology and Medicine". This interdisciplinary conference provided stimulating contributions from the very topical field Fractals in Biology and Medicine. This volume highlights the growing power and efficacy of the fractal geometry in understanding how to analyze living phenomena and complex shapes.

Computational Network Analysis with R

Computational Network Analysis with R PDF Author: Matthias Dehmer
Publisher: John Wiley & Sons
ISBN: 3527339582
Category : Medical
Languages : en
Pages : 364

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Book Description
This new title in the well-established "Quantitative Network Biology" series includes innovative and existing methods for analyzing network data in such areas as network biology and chemoinformatics. With its easy-to-follow introduction to the theoretical background and application-oriented chapters, the book demonstrates that R is a powerful language for statistically analyzing networks and for solving such large-scale phenomena as network sampling and bootstrapping. Written by editors and authors with an excellent track record in the field, this is the ultimate reference for R in Network Analysis.