Probabilistic Structures in Evolution

Probabilistic Structures in Evolution PDF Author: Ellen Baake
Publisher:
ISBN: 9783985475056
Category :
Languages : en
Pages :

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Networks

Networks PDF Author: Peter Whittle
Publisher: Cambridge University Press
ISBN: 1139463136
Category : Mathematics
Languages : en
Pages :

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Book Description
Point-to-point vs. hub-and-spoke. Questions of network design are real and involve many billions of dollars. Yet little is known about optimising design - nearly all work concerns optimising flow assuming a given design. This foundational book, first published in 2007, tackles optimisation of network structure itself, deriving comprehensible and realistic design principles. With fixed material cost rates, a natural class of models implies the optimality of direct source-destination connections, but considerations of variable load and environmental intrusion then enforce trunking in the optimal design, producing an arterial or hierarchical net. Its determination requires a continuum formulation, which can however be simplified once a discrete structure begins to emerge. Connections are made with the masterly work of Bendsøe and Sigmund on optimal mechanical structures and also with neural, processing and communication networks, including those of the Internet and the World Wide Web. Technical appendices are provided on random graphs and polymer models and on the Klimov index.

Genetic Algorithms + Data Structures = Evolution Programs

Genetic Algorithms + Data Structures = Evolution Programs PDF Author: Zbigniew Michalewicz
Publisher: Springer Science & Business Media
ISBN: 3662028301
Category : Mathematics
Languages : en
Pages : 257

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Book Description
'What does your Master teach?' asked a visitor. 'Nothing,' said the disciple. 'Then why does he give discourses?' 'He only points the way - he teaches nothing.' Anthony de Mello, One Minute Wisdom During the last three decades there has been a growing interest in algorithms which rely on analogies to natural processes. The emergence of massively par allel computers made these algorithms of practical interest. The best known algorithms in this class include evolutionary programming, genetic algorithms, evolution strategies, simulated annealing, classifier systems, and neural net works. Recently (1-3 October 1990) the University of Dortmund, Germany, hosted the First Workshop on Parallel Problem Solving from Nature [164]. This book discusses a subclass of these algorithms - those which are based on the principle of evolution (survival of the fittest). In such algorithms a popu lation of individuals (potential solutions) undergoes a sequence of unary (muta tion type) and higher order (crossover type) transformations. These individuals strive for survival: a selection scheme, biased towards fitter individuals, selects the next generation. After some number of generations, the program converges - the best individual hopefully represents the optimum solution. There are many different algorithms in this category. To underline the sim ilarities between them we use the common term "evolution programs" .

Understanding Evolution

Understanding Evolution PDF Author: Kostas Kampourakis
Publisher: Cambridge University Press
ISBN: 1107034914
Category : Science
Languages : en
Pages : 275

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Book Description
Bringing together conceptual obstacles and core concepts of evolutionary theory, this book presents evolution as straightforward and intuitive.

Mathematics of Evolution and Phylogeny

Mathematics of Evolution and Phylogeny PDF Author: Olivier Gascuel
Publisher: OUP Oxford
ISBN: 9780191513732
Category : Mathematics
Languages : en
Pages : 444

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Book Description
This book considers evolution at different scales: sequences, genes, gene families, organelles, genomes and species. The focus is on the mathematical and computational tools and concepts, which form an essential basis of evolutionary studies, indicate their limitations, and give them orientation. Recent years have witnessed rapid progress in the mathematics of evolution and phylogeny, with models and methods becoming more realistic, powerful, and complex. Aimed at graduates and researchers in phylogenetics, mathematicians, computer scientists and biologists, and including chapters by leading scientists: A. Bergeron, D. Bertrand, D. Bryant, R. Desper, O. Elemento, N. El-Mabrouk, N. Galtier, O. Gascuel, M. Hendy, S. Holmes, K. Huber, A. Meade, J. Mixtacki, B. Moret, E. Mossel, V. Moulton, M. Pagel, M.-A. Poursat, D. Sankoff, M. Steel, J. Stoye, J. Tang, L.-S. Wang, T. Warnow, Z. Yang, this book of contributed chapters explains the basis and covers the recent results in this highly topical area.

Evolutionary Genomics

Evolutionary Genomics PDF Author: Maria Anisimova
Publisher: Humana Press
ISBN: 9781617795848
Category : Medical
Languages : en
Pages : 556

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Book Description
Together with early theoretical work in population genetics, the debate on sources of genetic makeup initiated by proponents of the neutral theory made a solid contribution to the spectacular growth in statistical methodologies for molecular evolution. Evolutionary Genomics: Statistical and Computational Methods is intended to bring together the more recent developments in the statistical methodology and the challenges that followed as a result of rapidly improving sequencing technologies. Presented by top scientists from a variety of disciplines, the collection includes a wide spectrum of articles encompassing theoretical works and hands-on tutorials, as well as many reviews with key biological insight. Volume 2 begins with phylogenomics and continues with in-depth coverage of natural selection, recombination, and genomic innovation. The remaining chapters treat topics of more recent interest, including population genomics, -omics studies, and computational issues related to the handling of large-scale genomic data. Written in the highly successful Methods in Molecular BiologyTM series format, this work provides the kind of advice on methodology and implementation that is crucial for getting ahead in genomic data analyses. Comprehensive and cutting-edge, Evolutionary Genomics: Statistical and Computational Methods is a treasure chest of state-of the-art methods to study genomic and omics data, certain to inspire both young and experienced readers to join the interdisciplinary field of evolutionary genomics.

Darwin's Doubt

Darwin's Doubt PDF Author: Stephen C. Meyer
Publisher: Harper Collins
ISBN: 0062071491
Category : Science
Languages : en
Pages : 605

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Book Description
When Charles Darwin finished The Origin of Species, he thought that he had explained every clue, but one. Though his theory could explain many facts, Darwin knew that there was a significant event in the history of life that his theory did not explain. During this event, the “Cambrian explosion,” many animals suddenly appeared in the fossil record without apparent ancestors in earlier layers of rock. In Darwin’s Doubt, Stephen C. Meyer tells the story of the mystery surrounding this explosion of animal life—a mystery that has intensified, not only because the expected ancestors of these animals have not been found, but because scientists have learned more about what it takes to construct an animal. During the last half century, biologists have come to appreciate the central importance of biological information—stored in DNA and elsewhere in cells—to building animal forms. Expanding on the compelling case he presented in his last book, Signature in the Cell, Meyer argues that the origin of this information, as well as other mysterious features of the Cambrian event, are best explained by intelligent design, rather than purely undirected evolutionary processes.

Probabilistic Modeling in Bioinformatics and Medical Informatics

Probabilistic Modeling in Bioinformatics and Medical Informatics PDF Author: Dirk Husmeier
Publisher: Springer Science & Business Media
ISBN: 1846281199
Category : Computers
Languages : en
Pages : 511

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Book Description
Probabilistic Modelling in Bioinformatics and Medical Informatics has been written for researchers and students in statistics, machine learning, and the biological sciences. The first part of this book provides a self-contained introduction to the methodology of Bayesian networks. The following parts demonstrate how these methods are applied in bioinformatics and medical informatics. All three fields - the methodology of probabilistic modeling, bioinformatics, and medical informatics - are evolving very quickly. The text should therefore be seen as an introduction, offering both elementary tutorials as well as more advanced applications and case studies.

Probabilistic Mechanics of Quasibrittle Structures

Probabilistic Mechanics of Quasibrittle Structures PDF Author: Zdenek P. Bazant
Publisher: Cambridge University Press
ISBN: 1107151708
Category : Science
Languages : en
Pages : 319

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Book Description
This book presents an experimentally validated probabilistic strength theory of structures made of concrete, composites, ceramics and other quasibrittle materials.

Optimal Reliability-Based Design of Structures Against Several Natural Hazards

Optimal Reliability-Based Design of Structures Against Several Natural Hazards PDF Author: Alfredo H-S Ang
Publisher: CRC Press
ISBN: 1000461823
Category : Technology & Engineering
Languages : en
Pages : 71

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Book Description
Interest in the topic of structural reliability and optimal design has been rapidly growing in recent years. Besides, the field of numerical methods and artificial intelligence is experiencing a surge of new methods and the refinement of existing ones to expand opportunities to apply robust formulations to complex engineering problems. Today, more than ever, the field is receiving fresh ideas on how to face the challenges of finding a balance between cost and benefits that may lead towards the optimal design of systems. Recently, the probability density evolution method (PDEM) was proposed by Prof. Jie Li as an alternative way to obtain the stochastic and dynamic solution of the safety level of engineering systems under any kind of hazard. This work deals with the application of this powerful method to derive optimal design recommendations for large engineering systems under natural hazards. The three case studies illustrate to engineers and academic specialists how to strike a cost-effective balance in designing such systems.