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Author: Yi-Heng Sen
Publisher:
ISBN:
Category :
Languages : en
Pages : 58
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Book Description
This thesis focuses on characterizing and controlling the translocation of single 48.5 kbp [lambda]-DNA molecules through an artificial nanopore with the objective of enabling multiple measurements on the same molecule. This approach may enable nanopore sensors with enhanced size or charge resolution through statistical averaging over multiple detection events. Nanopores with dimensions of 200 nm x 500 nm x 5 pm connected by microfluidic channels were fabricated using soft lithography in polydimethylsiloxane (PDMS). The PDMS nanopore could successfully detect translocation events of single [lambda]DNA molecules. Factors such as applied voltage bias, DNA concentration, and dimensions of the channel were found to affect the frequency of translocation events and signal-to-noise ratio, which are critical factors for implementing multiple measurements on the same molecule with feedback control. Noise contributions from each part of the experimental apparatus and device were also characterized. Feedback control using Labview was implemented to reverse the direction of applied voltage bias upon detection of a translocation event. The direction of travel of single DNA molecules could be successfully reversed and two measurements on the same molecule were realized. This work lays the foundations for a nanofluidic device for enhanced measurement resolution through statistical averaging over multiple measurements on the same molecule.
Author: Yi-Heng Sen
Publisher:
ISBN:
Category :
Languages : en
Pages : 58
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Book Description
This thesis focuses on characterizing and controlling the translocation of single 48.5 kbp [lambda]-DNA molecules through an artificial nanopore with the objective of enabling multiple measurements on the same molecule. This approach may enable nanopore sensors with enhanced size or charge resolution through statistical averaging over multiple detection events. Nanopores with dimensions of 200 nm x 500 nm x 5 pm connected by microfluidic channels were fabricated using soft lithography in polydimethylsiloxane (PDMS). The PDMS nanopore could successfully detect translocation events of single [lambda]DNA molecules. Factors such as applied voltage bias, DNA concentration, and dimensions of the channel were found to affect the frequency of translocation events and signal-to-noise ratio, which are critical factors for implementing multiple measurements on the same molecule with feedback control. Noise contributions from each part of the experimental apparatus and device were also characterized. Feedback control using Labview was implemented to reverse the direction of applied voltage bias upon detection of a translocation event. The direction of travel of single DNA molecules could be successfully reversed and two measurements on the same molecule were realized. This work lays the foundations for a nanofluidic device for enhanced measurement resolution through statistical averaging over multiple measurements on the same molecule.
Author: Paolo Cadinu
Publisher:
ISBN:
Category :
Languages : en
Pages :
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Book Description
Author: Joshua Edel
Publisher: Royal Society of Chemistry
ISBN: 1849734046
Category : Science
Languages : en
Pages : 326
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Book Description
The Nanoscience and Nanotechnology Series provides a comprehensive resource of books covering key topics such as the synthesis, characterisation, performance and properties of nanostructured materials and technologies and their applications.
Author: Kazuma Mawatari
Publisher: World Scientific
ISBN: 1848168012
Category : Science
Languages : en
Pages : 187
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Book Description
For the past decade, new research fields utilizing microfluidics have been formed. General micro-integration methods were proposed, and the supporting fundamental technologies were widely developed. These methodologies have made various applications in the fields of analytical and chemical synthesis, and their superior performances such as rapid, simple, and high efficient processing have been proved. Recently, the space is further downscaling to 101 103nm scale (we call the space extended-nano space). The extended-nano space located between the conventional nanotechnology (100 101nm) and microtechnology (>1 m), and the research tools are not well established. In addition, the extended-nano space is a transient space from single molecules to bulk condensed phase, and fluidics and chemistry are not unknown. For these purposes, basic methodologies were developed, and new specific phenomena in fluidics and chemistry were found. These new phenomena were applied to unique chemical operations such as concentration and ion selection. The new research fields which are now being created are quite different from those in microspace. Unique devices are also increasingly being reported. In this book, we describe the fundamental technologies for extended-nano space and show the unique liquid properties found in this space and applications for single molecule or cell analysis. The research area is very new and hence, exciting. In contrast to other specialized areas, the research fields require wide knowledge (chemistry, fluidics, mechanics, photonics, biology etc.) and state-of-the-art technologies (bottom-up and top-down fabrication for various hard and soft materials, precise fluidic control, single molecule detection methods, and particle surface modification methods etc.), which have not been not covered by conventional review papers or books. Therefore, researchers or students new to the field need a new book covering these fields including recent research topics, applications and problems to be solved in the future. Our motivation is to summarize the state-of-the-art technologies for research and demonstrate new chemistry and fluidics in extended-nano space for students and researchers in academia or industry. We also emphasize the potential large impact microfluidic technologies have on chemistry and biochemistry.
Author: Joshua Benno Edel
Publisher: Royal Society of Chemistry
ISBN: 0854041478
Category : Science
Languages : en
Pages : 212
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Book Description
In his celebrated lecture at the APS meeting in 1959, Richard Feynman pondered the potential of miniaturization in the physical sciences and proposed a variety of new nano-tools. Since then, many of these predictions have become reality including the development and application of nanofluidics. This timely book fills a gap in the current reference literature in this exciting and growing field and is dedicated to the field of nanofluidics with a focus on bioanalytical applications. These nanoscale analytical instruments employ micromachined features and are able to manipulate fluid samples with high precision and efficiency. The book is written at a level accessible to experts and non-experts alike and is essential reading for all advanced nanobiotechnology courses within academic institutions.
Author: Eric Lagally
Publisher: CRC Press
ISBN: 1466594918
Category : Medical
Languages : en
Pages : 290
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Book Description
An increasing number of technologies are being used to detect minute quantities of biomolecules and cells. However, it can be difficult to determine which technologies show the most promise for high-sensitivity and low-limit detection in different applications. Microfluidics and Nanotechnology: Biosensing to the Single Molecule Limit details proven approaches for the detection of single cells and even single molecules—approaches employed by the world’s foremost microfluidics and nanotechnology laboratories. While similar books concentrate only on microfluidics or nanotechnology, this book focuses on the combination of soft materials (elastomers and other polymers) with hard materials (semiconductors, metals, and glass) to form integrated detection systems for biological and chemical targets. It explores physical and chemical—as well as contact and noncontact—detection methods, using case studies to demonstrate system capabilities. Presenting a snapshot of the current state of the art, the text: Explains the theory behind different detection techniques, from mechanical resonators for detecting cell density to fiber-optic methods for detecting DNA hybridization, and beyond Examines microfluidic advances, including droplet microfluidics, digital microfluidics for manipulating droplets on the microscale, and more Highlights an array of technologies to allow for a comparison of the fundamental advantages and challenges of each, as well as an appreciation of the power of leveraging scalability and integration to achieve sensitivity at low cost Microfluidics and Nanotechnology: Biosensing to the Single Molecule Limit not only serves as a quick reference for the latest achievements in biochemical detection at the single-cell and single-molecule levels, but also provides researchers with inspiration for further innovation and expansion of the field.
Author: Xiujun (James) Li
Publisher: Newnes
ISBN: 0444594612
Category : Science
Languages : en
Pages : 486
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Book Description
Multidisciplinary Microfluidic and Nanofluidic Lab-on-a-Chip: Principles and Applications provides chemists, biophysicists, engineers, life scientists, biotechnologists, and pharmaceutical scientists with the principles behind the design, manufacture, and testing of life sciences microfluidic systems. This book serves as a reference for technologies and applications in multidisciplinary areas, with an emphasis on quickly developing or new emerging areas, including digital microfluidics, nanofluidics, papers-based microfluidics, and cell biology. The book offers practical guidance on how to design, analyze, fabricate, and test microfluidic devices and systems for a wide variety of applications including separations, disease detection, cellular analysis, DNA analysis, proteomics, and drug delivery. Calculations, solved problems, data tables, and design rules are provided to help researchers understand microfluidic basic theory and principles and apply this knowledge to their own unique designs. Recent advances in microfluidics and microsystems for life sciences are impacting chemistry, biophysics, molecular, cell biology, and medicine for applications that include DNA analysis, drug discovery, disease research, and biofluid and environmental monitoring. - Provides calculations, solved problems, data tables and design rules to help understand microfluidic basic theory and principles - Gives an applied understanding of the principles behind the design, manufacture, and testing of microfluidic systems - Emphasizes on quickly developing and emerging areas, including digital microfluidics, nanofluidics, papers-based microfluidics, and cell biology
Author: Miao Yu
Publisher:
ISBN:
Category : DNA
Languages : en
Pages : 130
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Book Description
Author: Yuning Zhang
Publisher:
ISBN:
Category :
Languages : en
Pages :
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Book Description
"We developed a nanopore embedded nanofluidic device for single-molecular DNA analysis and manipulation. Utilizing the nanofluidic device, we pre-stretched ds-DNA molecules in nanochannel (quasi-1D confinement) and successfully translocated and recaptured DNA molecules through the nanochannel embedded nanopore. We developed a novel nanopore fabrication technique based on conductive atomic force microscopy and dielectric breakdown. We demonstrated the successful fabrication of single nanopore/nanopore array on thin nitride membranes in ambient conditions. We have also developed a model to explain the pore formation mechanism. We developed two different graphene liquid cells for both scanning electron microscopy and transmission electron microscopy. With the new liquid cells, we are able to record real-time nanoparticle dynamics in aqueous conditions under both SEM and TEM. The dramatic slowing down of nanoparticle diffusive movements are observed and analyzed for nanoparticles under nano-scale confinement. " --
Author: Nan Jing
Publisher:
ISBN:
Category :
Languages : en
Pages :
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Book Description
The objective of this work is to develop a micro/nanofluidic-based single molecule detection (SMD) scheme, which would allow us to inspect individual protein or protein complex study protein-protein interactions and their dynamics. This is a collaboration work with MD Anderson Cancer Center and we applied this scheme to study functions of various proteins related to cancer progression in hope to shed new light on cancer research. State-of-the-art micro/nano-fabrication technology is used to provide fused silica micro/nano-fluidic channel devices as our detection platform. Standard contact photolithography, projection photolithography and advanced electron-beam lithography are used to fabricate micro/nano-fluidic channel with width ranging from 100nm to 2[micron]. The dimensions of these miniaturized biochips are designed to ensure single molecule resolution during detection and shrinking the detection volume leads to increase in signal-to-noise ratio, which is very critical for SMD. To minimize surface adsorption of protein, a fused silica channel surface coating procedure is also developed and significantly improved the detection efficiency. A fluorescent-labeled protein sample solution is filled in the fluidic channel by capillary force, and proteins are electro-kinetically driven through the fluidic channel with external voltage source. Commercial functionalized Quantum Dots (Qdots) are used as fluorescent labels due to its various advantages over conventional organic dyes for single molecule multi-color detection application. A fluorescence correlation spectrometer system, equipped with a 375nm diode laser, 60x water immersion objective with N.A. of 1.2 and two avalanche photodiodes (APD) is implemented to excite single molecules as well as collect emitted fluorescence signals. A two-dimensional photon burst analysis technique (photon counts vs. burst width) is developed to analyze individual single molecule events. We are able to identify target protein or protein complex directly from cell lysate based on fluorescence photon counts, as well as study the dynamics of protein-protein interactions. More importantly, with this technique we are also able to assess interactions between three proteins, which cannot be done with current ensemble measurement techniques. In summary, the technique described in this work has the advantages of high sensitivity, short processing time (2-3 minutes), very small sample consumption and high resolution quantitative analysis. It could potentially revolutionize the area of protein interaction research and provides us with more clues for the future of cancer diagnostics and treatments.
