Generalized Linear Mixed Models with Applications in Agriculture and Biology

Generalized Linear Mixed Models with Applications in Agriculture and Biology PDF Author: Josafhat Salinas Ruíz
Publisher: Springer Nature
ISBN: 3031328000
Category : Science
Languages : en
Pages : 436

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Book Description
This open access book offers an introduction to mixed generalized linear models with applications to the biological sciences, basically approached from an applications perspective, without neglecting the rigor of the theory. For this reason, the theory that supports each of the studied methods is addressed and later - through examples - its application is illustrated. In addition, some of the assumptions and shortcomings of linear statistical models in general are also discussed. An alternative to analyse non-normal distributed response variables is the use of generalized linear models (GLM) to describe the response data with an exponential family distribution that perfectly fits the real response. Extending this idea to models with random effects allows the use of Generalized Linear Mixed Models (GLMMs). The use of these complex models was not computationally feasible until the recent past, when computational advances and improvements to statistical analysis programs allowed users to easily, quickly, and accurately apply GLMM to data sets. GLMMs have attracted considerable attention in recent years. The word "Generalized" refers to non-normal distributions for the response variable and the word "Mixed" refers to random effects, in addition to the fixed effects typical of analysis of variance (or regression). With the development of modern statistical packages such as Statistical Analysis System (SAS), R, ASReml, among others, a wide variety of statistical analyzes are available to a wider audience. However, to be able to handle and master more sophisticated models requires proper training and great responsibility on the part of the practitioner to understand how these advanced tools work. GMLM is an analysis methodology used in agriculture and biology that can accommodate complex correlation structures and types of response variables.

Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences

Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences PDF Author: Edward E. Gbur
Publisher:
ISBN: 9780891181835
Category : Mathematics
Languages : en
Pages : 283

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Book Description
Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences provides readers with an understanding and appreciation for the design and analysis of mixed models for non-normally distributed data. It is the only publication of its kind directed specifically toward the agricultural and natural resources sciences audience. Readers will especially benefit from the numerous worked examples based on actual experimental data and the discussion of pitfalls associated with incorrect analyses.

Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences

Analysis of Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences PDF Author: Edward E. Gbur
Publisher: John Wiley & Sons
ISBN: 0891181822
Category : Technology & Engineering
Languages : en
Pages : 304

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Book Description
Generalized Linear Mixed Models in the Agricultural and Natural Resources Sciences provides readers with an understanding and appreciation for the design and analysis of mixed models for non-normally distributed data. It is the only publication of its kind directed specifically toward the agricultural and natural resources sciences audience. Readers will especially benefit from the numerous worked examples based on actual experimental data and the discussion of pitfalls associated with incorrect analyses.

Generalized Linear Mixed Models

Generalized Linear Mixed Models PDF Author: Walter W. Stroup
Publisher: CRC Press
ISBN: 1439815135
Category : Mathematics
Languages : en
Pages : 547

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Book Description
With numerous examples using SAS PROC GLIMMIX, this text presents an introduction to linear modeling using the generalized linear mixed model as an overarching conceptual framework. For readers new to linear models, the book helps them see the big picture. It shows how linear models fit with the rest of the core statistics curriculum and points out the major issues that statistical modelers must consider.

Extending the Linear Model with R

Extending the Linear Model with R PDF Author: Julian J. Faraway
Publisher: CRC Press
ISBN: 1498720986
Category : Mathematics
Languages : en
Pages : 411

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Book Description
Start Analyzing a Wide Range of Problems Since the publication of the bestselling, highly recommended first edition, R has considerably expanded both in popularity and in the number of packages available. Extending the Linear Model with R: Generalized Linear, Mixed Effects and Nonparametric Regression Models, Second Edition takes advantage of the greater functionality now available in R and substantially revises and adds several topics. New to the Second Edition Expanded coverage of binary and binomial responses, including proportion responses, quasibinomial and beta regression, and applied considerations regarding these models New sections on Poisson models with dispersion, zero inflated count models, linear discriminant analysis, and sandwich and robust estimation for generalized linear models (GLMs) Revised chapters on random effects and repeated measures that reflect changes in the lme4 package and show how to perform hypothesis testing for the models using other methods New chapter on the Bayesian analysis of mixed effect models that illustrates the use of STAN and presents the approximation method of INLA Revised chapter on generalized linear mixed models to reflect the much richer choice of fitting software now available Updated coverage of splines and confidence bands in the chapter on nonparametric regression New material on random forests for regression and classification Revamped R code throughout, particularly the many plots using the ggplot2 package Revised and expanded exercises with solutions now included Demonstrates the Interplay of Theory and Practice This textbook continues to cover a range of techniques that grow from the linear regression model. It presents three extensions to the linear framework: GLMs, mixed effect models, and nonparametric regression models. The book explains data analysis using real examples and includes all the R commands necessary to reproduce the analyses.

Generalized Additive Models

Generalized Additive Models PDF Author: Simon N. Wood
Publisher: CRC Press
ISBN: 1498728340
Category : Mathematics
Languages : en
Pages : 497

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Book Description
The first edition of this book has established itself as one of the leading references on generalized additive models (GAMs), and the only book on the topic to be introductory in nature with a wealth of practical examples and software implementation. It is self-contained, providing the necessary background in linear models, linear mixed models, and generalized linear models (GLMs), before presenting a balanced treatment of the theory and applications of GAMs and related models. The author bases his approach on a framework of penalized regression splines, and while firmly focused on the practical aspects of GAMs, discussions include fairly full explanations of the theory underlying the methods. Use of R software helps explain the theory and illustrates the practical application of the methodology. Each chapter contains an extensive set of exercises, with solutions in an appendix or in the book’s R data package gamair, to enable use as a course text or for self-study.

Introduction to Statistical Methods for Financial Models

Introduction to Statistical Methods for Financial Models PDF Author: Thomas A Severini
Publisher: CRC Press
ISBN: 1351981919
Category : Business & Economics
Languages : en
Pages : 387

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Book Description
This book provides an introduction to the use of statistical concepts and methods to model and analyze financial data. The ten chapters of the book fall naturally into three sections. Chapters 1 to 3 cover some basic concepts of finance, focusing on the properties of returns on an asset. Chapters 4 through 6 cover aspects of portfolio theory and the methods of estimation needed to implement that theory. The remainder of the book, Chapters 7 through 10, discusses several models for financial data, along with the implications of those models for portfolio theory and for understanding the properties of return data. The audience for the book is students majoring in Statistics and Economics as well as in quantitative fields such as Mathematics and Engineering. Readers are assumed to have some background in statistical methods along with courses in multivariate calculus and linear algebra.

Statistical Regression and Classification

Statistical Regression and Classification PDF Author: Norman Matloff
Publisher: CRC Press
ISBN: 1498710921
Category : Business & Economics
Languages : en
Pages : 532

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Book Description
This text provides a modern introduction to regression and classification with an emphasis on big data and R. Each chapter is partitioned into a main body section and an extras section. The main body uses math stat very sparingly and always in the context of something concrete, which means that readers can skip the math stat content entirely if they wish. The extras section is for those who feel comfortable with analysis using math stat.

Stochastic Processes

Stochastic Processes PDF Author: Peter Watts Jones
Publisher: CRC Press
ISBN: 1498778127
Category : Mathematics
Languages : en
Pages : 271

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Book Description
Based on a well-established and popular course taught by the authors over many years, Stochastic Processes: An Introduction, Third Edition, discusses the modelling and analysis of random experiments, where processes evolve over time. The text begins with a review of relevant fundamental probability. It then covers gambling problems, random walks, and Markov chains. The authors go on to discuss random processes continuous in time, including Poisson, birth and death processes, and general population models, and present an extended discussion on the analysis of associated stationary processes in queues. The book also explores reliability and other random processes, such as branching, martingales, and simple epidemics. A new chapter describing Brownian motion, where the outcomes are continuously observed over continuous time, is included. Further applications, worked examples and problems, and biographical details have been added to this edition. Much of the text has been reworked. The appendix contains key results in probability for reference. This concise, updated book makes the material accessible, highlighting simple applications and examples. A solutions manual with fully worked answers of all end-of-chapter problems, and Mathematica® and R programs illustrating many processes discussed in the book, can be downloaded from crcpress.com.

Mixed-Effects Models in S and S-PLUS

Mixed-Effects Models in S and S-PLUS PDF Author: José C. Pinheiro
Publisher: Springer Science & Business Media
ISBN: 1441903178
Category : Computers
Languages : en
Pages : 538

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Book Description
R, linear models, random, fixed, data, analysis, fit.