Emerging Tools for Emerging Symbioses—Using Genomics Applications to Studying Endophytes PDF Download
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Author: Mysore V. Tejesvi
Publisher: Frontiers Media SA
ISBN: 2889452190
Category :
Languages : en
Pages : 159
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Book Description
Plants are typically colonized by numerous endophyte species symbiotically without any noticeable disease symptoms. These microbes are abundant, diverse and play critical ecological roles across natural and agricultural ecosystems. Endophytes have attracted the attention of researchers due to their various beneficial effects on plants, especially in agricultural crop species. Genomic tools will enhance our understanding on the growth and nutrition requirements of this host-symbiont relationship. Recent advances in DNA sequencing technologies and bioinformatic pipelines have allowed analyzing the plant microbiome and host-endophyte interaction more effectively with limited bias. Furthermore, various studies have employed and utilized transcriptomic and genomic tools to understand the role of endophytes and their interaction with plant hosts. This electronic book covers various research articles highlighting the important developments on endophytes using transcriptomics, next generation sequencing and genomic tools.
Author: Mysore V. Tejesvi
Publisher: Frontiers Media SA
ISBN: 2889452190
Category :
Languages : en
Pages : 159
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Book Description
Plants are typically colonized by numerous endophyte species symbiotically without any noticeable disease symptoms. These microbes are abundant, diverse and play critical ecological roles across natural and agricultural ecosystems. Endophytes have attracted the attention of researchers due to their various beneficial effects on plants, especially in agricultural crop species. Genomic tools will enhance our understanding on the growth and nutrition requirements of this host-symbiont relationship. Recent advances in DNA sequencing technologies and bioinformatic pipelines have allowed analyzing the plant microbiome and host-endophyte interaction more effectively with limited bias. Furthermore, various studies have employed and utilized transcriptomic and genomic tools to understand the role of endophytes and their interaction with plant hosts. This electronic book covers various research articles highlighting the important developments on endophytes using transcriptomics, next generation sequencing and genomic tools.
Author: Sunil K. Deshmukh
Publisher: CRC Press
ISBN: 1000653773
Category : Medical
Languages : en
Pages : 450
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Book Description
Traditional studies in mycology mainly deal with damage caused by fungi, for instance, diseases of plants, animal ailments, air-borne pathogens, decomposition of wood and production of mycotoxins in food. Applied mycology focuses on the fermentation of foods (flours, bakery products, cheese and others) and production of fermented products (wine, beer and spirit). Further value-added approaches show the significance of fungi in the production of bioactive metabolites and pharmaceuticals used in the treatment of human diseases, including cancer, and plant diseases (e.g. pest control). Due to a dependence on fossil resources, production of bio-renewable merchandise gained importance and fungi serve as potential biological agents in sustaining global economy. Recent developments in mycology revealed their significance in the fields of advanced research, in particular building materials, packaging resources, electronic devises and leather-like goods. In addition, fungi possess several qualities to degrade non-biodegradable compounds in the ecosystem and assist in sustainable waste bioremediation. This book covers the current biotechnological advances and bio-prospect potential of fungi. Fungal biopolymers possess various applications, including prebiotics, therapeutics, immunoceuticals, drug-discovery and drug-delivery. Fungal bioactive metabolites have several implications beyond antibiotics, such as volatiles, biofuels, nematicides and pigments. They also serve as prospective tools in the production of nanoparticles of medicinal, nutritional and industrial significance. In view of environmental protection, fungal activity and products aid in bioremediation via degradation of xenobiotics and solid wastes. Fungi can produce agriculturally compatible metabolites to enhance plant production. Knowledge on fungal genomics facilitates the gene manipulation towards biotechnological applications (disease diagnosis, pathogen detection, gene expression and mutualistic interactions). This book addresses the application of fungi in different areas and serves as a potential knowledge bank for graduates, post-graduates and researchers contemplating fungal applications.
Author: Anna Maria Pirttilä
Publisher: Springer
ISBN: 3319898337
Category : Nature
Languages : en
Pages : 462
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Book Description
Endophytes are commonly known as microorganisms, mainly bacteria and fungi, which live inside plant tissues without inducing symptoms. Considering the long-lived trees, endophytes have a fundamental role in preparing their hosts to face extreme weather conditions, drought, heat, cold, and pathogen and herbivore attacks. The current knowledge clearly demonstrates the importance of endophytes in shaping the plant diversity in a forest. Endophytes have an important capacity for biocontrol of forest diseases. Considering endophyte diversity and the range of various compounds and enzymes they can produce, endophytes can be used for various biotechnological applications.
Author: Trevor R. Hodkinson
Publisher: Cambridge University Press
ISBN: 1108471765
Category : Business & Economics
Languages : en
Pages : 445
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Book Description
Discusses the role of endophytes in food security, forestry and health. It outlines their general biology, spanning theory to practice.
Author: Sumita Jha
Publisher: Springer
ISBN: 9783319904832
Category : Science
Languages : en
Pages : 0
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Book Description
This reference work presents an authoritative review of endophytes and their applications to human welfare. Endophytes have become a class of interesting and curious microorganisms due to their intimate intra- and intercellular association with plants for competence, survival and reproduction. They can be bacteria or fungi, and they are usually non-pathogenic to their host. Endophytes have important applications in agriculture and industry, namely, they can help with plant growth, act as biocontrol agents and biosurfactant and secondary metabolite producers, and they are also rich sources of bioactive natural products. Novel and beneficial effects of endophytes are constantly emerging, and this book, divided into four sections, provides readers with the latest developments in this fast expanding field. In the first section, readers will discover the biology of the major groups of endophytes, followed by a summary of conventional and molecular tools for endophytes’ identification in Section II. The production of high-value metabolites by endophytes will be explored in the third section of this book, and in the final section, readers will find several case studies, examples and prospects for endophytes’ application in agriculture and industry. Written by leading international authors, this reference work will appeal to a wide readership, from students and researchers in the field of botany, biotechnology and agriculture to professionals interested in the production and applications of endophytic metabolites.
Author: John Dighton
Publisher: CRC Press
ISBN: 1498706673
Category : Nature
Languages : en
Pages : 652
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Book Description
"...a number of chapters provide excellent summaries of the modern methods available for studying fungal ecology, along with those more traditional methods that are still extremely valuable...overall it is a hugely valuable compendium of fungal ecology research. It is a must for the library shelf." -Lynne Boddy, Cardiff University, UK, Mycological Research, 2006 "These 44 chapters are an excellent starting point for anyone interested in fungal communities, in the broadest sense of the term. It is a book for dipping into...may be the last comprehensive treatment of fungal communities before the molecular revolution." -Meriel Jones, University of Liverpool, UK, Microbiology Today "... the scope of the work is tremendous. ... Excellent chapters providing overviews of methods ... provide a snap shot of the current approaches used to understand fungal communities at several levels of organization. This book should probably be on the shelf of every student of mycology, and many ecologists too. For all students, this book should be a valuable resource and source of inspiration." -Daniel Henk, Imperial College Faculty of Medicine, London, in Inoculum, Vol. 59, No. 3, May 2008 "Thorough taxonomic and subject indices further aid the reader in navigating through multiple authors’ treatments of subjects of interest." - Anthony Amend, Department of Botany, University of Hawaii at Manoa in Economic Botany, V. 61 In all subjects in science, new findings and the use of new technologies allow us to develop an ever-greater understanding of our world. Expanded and updated coverage in the fourth edition includes: Adds new sections on Integrating Genomics and Metagenomics into Community Analysis, Recent Advances in Fungal Endophyte Research, Fungi in the Built Environment, and Fungal Signaling and Communication Includes a broader treatment of fungal communities in natural ecosystems with in-depth coverage of fungal adaptations to stress and conservation Expands coverage of the influence of climate change on fungi and the role of fungi in organically polluted ecosystems Includes contributions from scientists from 20 nations to illustrate a true global approach for bridging gaps between ecological concepts and mycology
Author: Christian R. Landry
Publisher: Springer Science & Business Media
ISBN: 9400773471
Category : Science
Languages : en
Pages : 358
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Book Description
Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.
Author: Devendra K. Choudhary
Publisher: Springer
ISBN: 9811003882
Category : Science
Languages : en
Pages : 233
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Book Description
With a focus on food safety, this book highlights the importance of microbes in sustainable agriculture. Plants, sessile organisms that are considered as primary producers in the ecosystem and communicate with above- and below-ground communities that consist of microbes, insects, and other vertebrate and invertebrate animals, are subjected to various kinds of stress. Broadly speaking, these can be subdivided into abiotic and biotic stresses. Plants have evolved to develop elaborate mechanisms for coping with and adapting to the environmental stresses. Among other stresses, habitat-imposed biotic stress is one serious condition causing major problems for crop productivity. Most plants employ plant-growth-promoting microorganisms (PGPMs) to combat and protect themselves from stresses and also for better growth. PGPMs are bacteria associated with plant roots and they augment plant productivity and immunity. They are also defined as root-colonizing bacteria that have beneficial effects on plant growth and development. Remarkably, PGPMs including mycorrhizae, rhizobia, and rhizobacteria (Acinetobacter, Agrobacterium, Arthrobacter, Azospirillum, Bacillus, Bradyrhizobium, Frankia, Pseudomonas, Rhizobium, Serratia, Thiobacillus) form associations with plant roots and can promote plant growth by increasing plants’ access to soil minerals and protecting them against pathogens. To combat the pathogens causing different diseases and other biotic stresses, PGPMs produce a higher level of resistance in addition to plants’ indigenous immune systems in the form of induced systemic resistance (ISR). The ISR elicited by PGPMs has suppressed plant diseases caused by a range of pathogens in both the greenhouse and field. As such, the role of these microbes can no longer be ignored for sustainable agriculture. Today, PGPMs are also utilized in the form of bio-fertilizers to increase plant productivity. However, the use of PGPMs requires a precise understanding of the interactions between plants and microbes, between microbes and microbiota, and how biotic factors influence these relationships. Consequently, continued research is needed to develop new approaches to boost the efficiency of PGPMs and to understand the ecological, genetic and biochemical relationships in their habitat. The book focuses on recent research concerning interactions between PGPMs and plants under biotic stress. It addresses key concerns such as – 1. The response of benign microbes that benefit plants under biotic stress 2. The physiological changes incurred in plants under harsh conditions 3. The role of microbial determinants in promoting plant growth under biotic stress The book focuses on a range of aspects related to PGPMs such as their mode of action, priming of plant defence and plant growth in disease challenged crops, multifunctional bio-fertilizers, PGPM-mediated disease suppression, and the effect of PGPMs on secondary metabolites etc. The book will be a valuable asset to researchers and professionals working in the area of microbial-mediated support of plants under biotic stress.
Author: Vernon Ahmadjian
Publisher: John Wiley & Sons
ISBN: 9780471578857
Category : Science
Languages : en
Pages : 274
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Book Description
Not only an invaluable reference to what is known about lichen bionts and their interactions but also a guide to future studies. Compares various aspects of lichen-forming bionts with those of other fungi, algae and cyanobacteria. Features in-depth descriptions of culture methods. Includes over 1000 references representing a selective sampling in such subjects as air pollution, photosynthesis and respiration.
Author: Ajay Kumar
Publisher: Woodhead Publishing
ISBN: 0323859208
Category : Science
Languages : en
Pages : 282
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Book Description
Microbial Management of Plant Stresses: Current Trends, Application and Challenges explores plant microbiota including isolated microbial communities that have been used to study the functional capacities, ecological structure and dynamics of the plant-microbe interaction with focus on agricultural crops. Presenting multiple examples and evidence of the potential genetic flexibility of microbial systems to counteract the climate induced stresses associated with their host as a part of indigenous system, this book presents strategies and approaches for improvement of microbiome. As climate changes have altered the global carbon cycling and ecological dynamics, the regular and periodic occurrences of severe salinity, drought, and heat stresses across the different regimes of the agro-ecological zones have put additional constraints on agricultural ecosystem to produce efficient foods and other derived products for rapidly growing world population through low cost and sustainable technology. Furthermore chemical amendments, agricultural inputs and other innovative technologies although may have fast results with fruitful effects for enhancing crop productivity but also have other ecological drawbacks and environmental issues and offer limited use opportunities. Microbial formulations and/or microbial consortia deploying two or multiple partners have been frequently used for mitigation of various stresses, however, field success is often variable and improvement Smart, knowledge-driven selection of microorganisms is needed as well as the use of suitable delivery approaches and formulations. Microbial Management of Plant Stresses: Current Trends, Application and Challenges presents the functional potential of plant microbiota to address current challenges in crop production addressing this urgent need to bring microbial innovations into practice. - Demonstrates microbial ecosystems as an indigenous system for improving plant growth, health and stress resilience - Covers all the novel aspects of microbial regulatory mechanism. Key challenges associated with microbial delivery and successful establishment for plant growth promotion and stress avoidance - Explores plant microbiome and the modulation of plant defense and ecological dynamics under stressed environment
