Computational Systems Bioinformatics (Volume 6) - Proceedings Of The Conference Csb 2007

Computational Systems Bioinformatics (Volume 6) - Proceedings Of The Conference Csb 2007 PDF Author: Peter Markstein
Publisher: World Scientific
ISBN: 1908979097
Category : Science
Languages : en
Pages : 472

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Book Description
This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. Abstracts from the keynote addresses and invited talks are also included.The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field./a

Computational Systems Bioinformatics (Volume 6) - Proceedings Of The Conference Csb 2007

Computational Systems Bioinformatics (Volume 6) - Proceedings Of The Conference Csb 2007 PDF Author: Peter Markstein
Publisher: World Scientific
ISBN: 1908979097
Category : Science
Languages : en
Pages : 472

Get Book Here

Book Description
This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. Abstracts from the keynote addresses and invited talks are also included.The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field./a

Computational Systems Bioinformatics (Volume 7) - Proceedings Of The Csb 2008 Conference

Computational Systems Bioinformatics (Volume 7) - Proceedings Of The Csb 2008 Conference PDF Author: Peter Markstein
Publisher: World Scientific
ISBN: 1908978708
Category : Science
Languages : en
Pages : 355

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Book Description
This proceedings volume contains 29 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications.The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field./a

Parameterized Algorithmics for Network Analysis: Clustering & Querying

Parameterized Algorithmics for Network Analysis: Clustering & Querying PDF Author: Christian Komusiewicz
Publisher: Univerlagtuberlin
ISBN: 3798323798
Category :
Languages : en
Pages : 181

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Book Description


Computational Systems Bioinformatics

Computational Systems Bioinformatics PDF Author: Peter Markstein
Publisher: World Scientific
ISBN: 1860948731
Category : Computers
Languages : en
Pages : 472

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Book Description
This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. Abstracts from the keynote addresses and invited talks are also included. The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field. Sample Chapter(s). Chapter 1: Whole-Genome Analysis of Dorsal Gradient Thresholds in the Drosophila Embryo (102 KB). Contents: Learning Predictive Models of Gene Regulation (C Leslie); Algorithms for Selecting Breakpoint Locations to Optimize Diversity in Protein Engineering by Site-Directed Protein Recombination (W Zheng et al.); Cancer Molecular Pattern Discovery by Subspace Consensus Kernel Classification (X Han); Transcriptional Profiling of Definitive Endoderm Derived from Human Embryonic Stem Cells (H Liu et al.); A Markov Model Based Analysis of Stochastic Biochemical Systems (P Ghosh et al.); Clustering of Main Orthologs for Multiple Genomes (Z Fu & T Jiang); Extraction, Quantification and Visualization of Protein Pockets (X Zhang & C Bajaj); Consensus Contact Prediction by Linear Programming (X Gao et al.); An Active Visual Search Interface for Medline (W Xuan et al.); Exact and Heuristic Algorithms for Weighted Cluster Editing (S Rahmann et al.); Reconcilation with Non-binary Species Trees (B Vernot et al.); and other papers. Readership: Research and application community in bioinformatics, systems biology, medicine, pharmacology and biotechnology. Graduate researchers in bioinformatics and computational biology.

Discrete Optimization and Operations Research

Discrete Optimization and Operations Research PDF Author: Yury Kochetov
Publisher: Springer
ISBN: 3319449141
Category : Computers
Languages : en
Pages : 597

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Book Description
This book constitutes the proceedings of the 9th International Conference on Discrete Optimization and Operations Research, DOOR 2016, held in Vladivostok, Russia, in September 2016. The 39 full papers presented in this volume were carefully reviewed and selected from 181 submissions. They were organized in topical sections named: discrete optimization; scheduling problems; facility location; mathematical programming; mathematical economics and games; applications of operational research; and short communications.

Algorithms and Methods in Structural Bioinformatics

Algorithms and Methods in Structural Bioinformatics PDF Author: Nurit Haspel
Publisher: Springer Nature
ISBN: 303105914X
Category : Science
Languages : en
Pages : 120

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Book Description
The three-dimensional structure and function of molecules present many challenges and opportunities for developing an understanding of biological systems. With the increasing availability of molecular structures and the advancing accuracy of structure predictions and molecular simulations, the space for algorithmic advancement on many analytical and predictive problems is both broad and deep. To support this field, a rich set of methods and algorithms are available, addressing a variety of important problems such as protein-protein interactions, the effect of mutations on protein structure and function, and protein structure determination. Despite recent advancements in the field, in particular in protein folding with the development of AlphaFold, many problems still remain unsolved. In this book we focus on a number of topics in Structural Bioinformatics: Cryo-EM structural detection, protein conformational exploration, elucidation of molecular binding surface using geometry, the effect of mutations, insertions and deletions on protein structural stability, and protein-ligand binding.

The Nature of Computation: Logic, Algorithms, Applications

The Nature of Computation: Logic, Algorithms, Applications PDF Author: Paola Bonizzoni
Publisher: Springer
ISBN: 3642390536
Category : Computers
Languages : en
Pages : 462

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Book Description
This book constitutes the refereed proceedings of the 9th Conference on Computability in Europe, CiE 2013, held in Milan, Italy, in July 2013. The 48 revised papers presented together with 1 invited lecture and 2 tutorials were carefully reviewed and selected with an acceptance rate of under 31,7%. Both the conference series and the association promote the development of computability-related science, ranging over mathematics, computer science and applications in various natural and engineering sciences such as physics and biology, and also including the promotion of related non-scientific fields such as philosophy and history of computing.

Proceedings Of The 6th Asia-pacific Bioinformatics Conference

Proceedings Of The 6th Asia-pacific Bioinformatics Conference PDF Author: Alvis Brazma
Publisher: World Scientific
ISBN: 1908978953
Category : Science
Languages : en
Pages : 413

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Book Description
High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, thus enabling large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, metabolic pathways, and gene expression profiles of normal and diseased tissues are rapidly being generated for human and model organisms. Bioinformatics is therefore gaining importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of the genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industry practitioners at the 6th Asia-Pacific Bioinformatics Conference held in Kyoto, Japan, in January 2008./a

Multi-Label Dimensionality Reduction

Multi-Label Dimensionality Reduction PDF Author: Liang Sun
Publisher: CRC Press
ISBN: 1439806152
Category : Business & Economics
Languages : en
Pages : 210

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Book Description
Similar to other data mining and machine learning tasks, multi-label learning suffers from dimensionality. An effective way to mitigate this problem is through dimensionality reduction, which extracts a small number of features by removing irrelevant, redundant, and noisy information. The data mining and machine learning literature currently lacks a unified treatment of multi-label dimensionality reduction that incorporates both algorithmic developments and applications. Addressing this shortfall, Multi-Label Dimensionality Reduction covers the methodological developments, theoretical properties, computational aspects, and applications of many multi-label dimensionality reduction algorithms. It explores numerous research questions, including: How to fully exploit label correlations for effective dimensionality reduction How to scale dimensionality reduction algorithms to large-scale problems How to effectively combine dimensionality reduction with classification How to derive sparse dimensionality reduction algorithms to enhance model interpretability How to perform multi-label dimensionality reduction effectively in practical applications The authors emphasize their extensive work on dimensionality reduction for multi-label learning. Using a case study of Drosophila gene expression pattern image annotation, they demonstrate how to apply multi-label dimensionality reduction algorithms to solve real-world problems. A supplementary website provides a MATLAB® package for implementing popular dimensionality reduction algorithms.

Intelligent Decision Technologies 2017

Intelligent Decision Technologies 2017 PDF Author: Ireneusz Czarnowski
Publisher: Springer
ISBN: 3319594214
Category : Technology & Engineering
Languages : en
Pages : 337

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Book Description
The volume presents a collection of peer-reviewed articles from the 9th KES International Conference on Intelligent Decision Technologies (KES-IDT-17), held in Vilamoura, Algarve, Portugal on 21–23 June 2017. The conference addressed critical areas of computer science, as well as promoting knowledge transfer and the generation of new ideas in the field of intelligent decision making, project management and data analysis. The range of topics addressed includes methods of classification, prediction, data analysis, decision support, modeling, social media and many more in such diverse areas as finance, linguistics, management and transportation.