Spatio-temporal Variation and Dissolved Organic Carbon Processing of Streambed Microbial Community

Spatio-temporal Variation and Dissolved Organic Carbon Processing of Streambed Microbial Community PDF Author: Philips Olugbemiga Akinwole
Publisher:
ISBN:
Category : Electronic dissertations
Languages : en
Pages : 168

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Book Description
Sedimentary microbial communities play a critical ecological role in lotic ecosystems and are responsible for numerous biogeochemical transformations, including dissolved organic matter (DOM) uptake, degradation, and mineralization. The goals of this study were to elucidate the benthic microbes responsible for utilization of humic DOM in streams and to assess overall variability in microbial biomass and community structure over time and across multiple spatial scales in stream networks, as DOM quality and quantity will likely change with stream order. In Chapter 2, multiple spatial patterns of microbial biomass and community structure were examined in stream sediments from two watersheds; the Neversink River watershed (NY; 1st, 3rd and 5th order streams sampled) and the White Clay Creek watershed (PA; 1st through 3rd order streams sampled). Microbial biomass and community structure were estimated by phospholipid phosphate and phospholipid fatty acids (PLFA) analyses. Multivariate analysis showed that sedimentary C:N ratios, percent carbon, sediment surface area and percent water content explained 68% of the variations in total microbial biomass. Overall, the magnitude of within stream variation in microbial biomass was small compared to the variability noted among streams and between watersheds. Principal component analysis (PCA) of PLFA profiles showed that microbial community structure displayed a distinct watershed-level biogeography, as well as variation along a stream order gradient. Chapter 3 demonstrated that benthic microbial biomass was seasonally dynamic and significantly correlated to a combination of high and low flood pulse counts, variability in daily flow and DOC concentration in the White Clay Creek. Additionally, the seasonal pattern of variation observed in microbial community structure was as a result of shift between the ratios of prokaryotic to eukaryotic component of the community. This shift was significantly correlated with seasonal changes in median daily flow, high and low flood pulse counts, DOC concentrations and water temperature. Compound-specific 13C analysis of PLFA showed that both bacterial and microeukaryotic stable carbon isotope ratios were heaviest in the spring and lightest in autumn or winter. Bacterial lipids were isotopically depleted on average by 2 - 5 / relative to δ13C of total organic carbon suggesting bacterial consumption of allochthonous organic matter, and enriched relative to δ13C algae-derived carbon source. In Chapter 4, heterotrophic microbes that metabolize humic DOM in a third-order stream were identified through trace-additions of 13C-labeled tree tissue leachate (13C-DOC) into stream sediment mesocosms. Microbial community structure was assessed using PLFA biomarkers, and metabolically active members were identified through 13C-PLFA analysis (PLFA-SIP). Comparison by PCA of the microbial communities in stream sediments and stream sediments incubated in both the presence and absence of 13C-DOC showed our mesocosm-based experimental design as sufficiently robust to investigate the utilization of 13C-DOC by sediment microbial communities. After 48 hours of incubation, PLFA-SIP identified heterotrophic α, β, and γ- proteobacteria and facultative anaerobic bacteria as the organisms primarily responsible for humic DOC consumption in streams and heterotrophic microeucaryotes as their predators. The evidence presented in this study shows a complex relationship between microbial community structure, environmental heterogeneity and utilization of humic DOC, indicating that humic DOC quality and quantity along with other hydro-ecological variables should be considered among the important factors that structure benthic microbial communities in lotic ecosystems.

Spatio-temporal Variation and Dissolved Organic Carbon Processing of Streambed Microbial Community

Spatio-temporal Variation and Dissolved Organic Carbon Processing of Streambed Microbial Community PDF Author: Philips Olugbemiga Akinwole
Publisher:
ISBN:
Category : Electronic dissertations
Languages : en
Pages : 168

Get Book Here

Book Description
Sedimentary microbial communities play a critical ecological role in lotic ecosystems and are responsible for numerous biogeochemical transformations, including dissolved organic matter (DOM) uptake, degradation, and mineralization. The goals of this study were to elucidate the benthic microbes responsible for utilization of humic DOM in streams and to assess overall variability in microbial biomass and community structure over time and across multiple spatial scales in stream networks, as DOM quality and quantity will likely change with stream order. In Chapter 2, multiple spatial patterns of microbial biomass and community structure were examined in stream sediments from two watersheds; the Neversink River watershed (NY; 1st, 3rd and 5th order streams sampled) and the White Clay Creek watershed (PA; 1st through 3rd order streams sampled). Microbial biomass and community structure were estimated by phospholipid phosphate and phospholipid fatty acids (PLFA) analyses. Multivariate analysis showed that sedimentary C:N ratios, percent carbon, sediment surface area and percent water content explained 68% of the variations in total microbial biomass. Overall, the magnitude of within stream variation in microbial biomass was small compared to the variability noted among streams and between watersheds. Principal component analysis (PCA) of PLFA profiles showed that microbial community structure displayed a distinct watershed-level biogeography, as well as variation along a stream order gradient. Chapter 3 demonstrated that benthic microbial biomass was seasonally dynamic and significantly correlated to a combination of high and low flood pulse counts, variability in daily flow and DOC concentration in the White Clay Creek. Additionally, the seasonal pattern of variation observed in microbial community structure was as a result of shift between the ratios of prokaryotic to eukaryotic component of the community. This shift was significantly correlated with seasonal changes in median daily flow, high and low flood pulse counts, DOC concentrations and water temperature. Compound-specific 13C analysis of PLFA showed that both bacterial and microeukaryotic stable carbon isotope ratios were heaviest in the spring and lightest in autumn or winter. Bacterial lipids were isotopically depleted on average by 2 - 5 / relative to δ13C of total organic carbon suggesting bacterial consumption of allochthonous organic matter, and enriched relative to δ13C algae-derived carbon source. In Chapter 4, heterotrophic microbes that metabolize humic DOM in a third-order stream were identified through trace-additions of 13C-labeled tree tissue leachate (13C-DOC) into stream sediment mesocosms. Microbial community structure was assessed using PLFA biomarkers, and metabolically active members were identified through 13C-PLFA analysis (PLFA-SIP). Comparison by PCA of the microbial communities in stream sediments and stream sediments incubated in both the presence and absence of 13C-DOC showed our mesocosm-based experimental design as sufficiently robust to investigate the utilization of 13C-DOC by sediment microbial communities. After 48 hours of incubation, PLFA-SIP identified heterotrophic α, β, and γ- proteobacteria and facultative anaerobic bacteria as the organisms primarily responsible for humic DOC consumption in streams and heterotrophic microeucaryotes as their predators. The evidence presented in this study shows a complex relationship between microbial community structure, environmental heterogeneity and utilization of humic DOC, indicating that humic DOC quality and quantity along with other hydro-ecological variables should be considered among the important factors that structure benthic microbial communities in lotic ecosystems.

Spatial and Temporal Variation in Degradation of Dissolved Organic Carbon on the Main Stem of the Lamprey River

Spatial and Temporal Variation in Degradation of Dissolved Organic Carbon on the Main Stem of the Lamprey River PDF Author:
Publisher:
ISBN:
Category : Water
Languages : en
Pages : 132

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Influence of Geological Variation on Dissolved Organic Matter Quality and Microbial Community Structure in Forested Stream Sediments

Influence of Geological Variation on Dissolved Organic Matter Quality and Microbial Community Structure in Forested Stream Sediments PDF Author: Jennifer June Mosher
Publisher:
ISBN:
Category :
Languages : en
Pages : 216

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Microbial Metabolism of Dissolved Organic Carbon in Stream Hyporheic Zones

Microbial Metabolism of Dissolved Organic Carbon in Stream Hyporheic Zones PDF Author: William V. Sobczak
Publisher:
ISBN:
Category :
Languages : en
Pages : 488

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Spatial Variation of Dissolved Organic Carbon Along Streams in Swedish Boreal Catchments

Spatial Variation of Dissolved Organic Carbon Along Streams in Swedish Boreal Catchments PDF Author: Johan Temnerud
Publisher:
ISBN: 9789176684375
Category :
Languages : en
Pages : 41

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Intermittent Rivers and Ephemeral Streams

Intermittent Rivers and Ephemeral Streams PDF Author: Thibault Datry
Publisher: Academic Press
ISBN: 0128039043
Category : Science
Languages : en
Pages : 624

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Book Description
Intermittent Rivers and Ephemeral Streams: Ecology and Management takes an internationally broad approach, seeking to compare and contrast findings across multiple continents, climates, flow regimes, and land uses to provide a complete and integrated perspective on the ecology of these ecosystems. Coupled with this, users will find a discussion of management approaches applicable in different regions that are illustrated with relevant case studies. In a readable and technically accurate style, the book utilizes logically framed chapters authored by experts in the field, allowing managers and policymakers to readily grasp ecological concepts and their application to specific situations. - Provides up-to-date reviews of research findings and management strategies using international examples - Explores themes and parallels across diverse sub-disciplines in ecology and water resource management utilizing a multidisciplinary and integrative approach - Reveals the relevance of this scientific understanding to managers and policymakers

Dissolved organic carbon production by microbial populations in the Atlantic Ocean

Dissolved organic carbon production by microbial populations in the Atlantic Ocean PDF Author: E. TEIRA
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Spatial and Temporal Variability of Soluble Organic Carbon

Spatial and Temporal Variability of Soluble Organic Carbon PDF Author: Harvey Joel Liss
Publisher:
ISBN:
Category :
Languages : en
Pages : 610

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Decoding DOM Degradation with Metatranscriptomics

Decoding DOM Degradation with Metatranscriptomics PDF Author: Sarah G. Nalven
Publisher:
ISBN:
Category : Carbon cycle (Biogeochemistry)
Languages : en
Pages : 70

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Book Description
Arctic soils are warming, making vast stores of organic carbon available for conversion to CO2. This could create a positive feedback loop and accelerate global warming, but the processes that convert this carbon into CO2 are not well understood. We investigated how the combined activities of sunlight and microbes degrade soil dissolved organic matter (DOM), an important component of the carbon processed in arctic freshwaters. DOM leached from the organic layer of moist acidic tundra was exposed to natural sunlight (24 h) or kept in the dark, inoculated and incubated with a soil microbial community, and analyzed for DOM composition (FT-ICR MS) and microbial gene expression (metatranscriptomics). We found that DOM degraded by sunlight was similar in composition to DOM degraded by microbes, and consequently, microbial activity was lower when incubated with sunlight-exposed DOM. We also found sunlight-exposed DOM caused global shifts in both microbial gene expression and the taxonomic groups conducting this expression. Greater expression of transcription and translation genes suggested growth, while lower expression of metabolism, motility, and transport genes suggested reduced investment in scavenging. Photo-exposure of DOM also caused reduced expression of enzymes involved in aromatic degradation, oxygenases, and decarboxylases, suggesting sunlight degraded aromatics, oxidized DOM, and decarboxylated DOM. Shifts in expression of transporters for small, labile compounds and nutrient-containing compounds suggested photo-exposure may have altered bioavailability of these compounds in the DOM pool. These findings demonstrate that even small amounts of sunlight can alter DOM in ways that evoke profound changes in microbial functioning, supporting the idea that sunlight plays a key role in determining the microbial processing of DOM in arctic freshwaters.

Production of biologically refractory dissolved organic carbon by natural seawater microbial populations

Production of biologically refractory dissolved organic carbon by natural seawater microbial populations PDF Author: J.E. BROPHY
Publisher:
ISBN:
Category :
Languages : en
Pages :

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