Regulation of C. Elegans Behavior and Physiology by the Hypoxia-response Pathway

Regulation of C. Elegans Behavior and Physiology by the Hypoxia-response Pathway PDF Author: Corinne Lenore Pender
Publisher:
ISBN:
Category :
Languages : en
Pages : 232

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Book Description
The transcriptional response controlling adaptation to internal and environmental hypoxia is broadly conserved in animals. The key mediator of this response is the transcription factor HIF (hypoxia-inducible factor), which is active only in hypoxia due to the function of its negative regulators, the prolyl hydroxylase EGLN and the E3 ubiquitin ligase complex recognition subunit pVHL. HIF drives transcription of hundreds of targets that promote hypoxia adaptation. Recent work has also described important and broad roles for HIF outside of the traditional hypoxia response, including functions in immunity, oxidative and other stress responses, and behavior; how HIF targets drive these aspects of animal physiology is poorly understood. In this dissertation, I describe genetic analyses of the nematode C. elegans that have provided insight into the function of HIF targets in regulating animal physiology and behavior. The EGLN family was defined by the C. elegans homolog, EGL-9. Prior to the identification of EGL-9 as a HIF hydroxylase, our laboratory discovered the egl-9 gene from studies of egg-laying behavior. egl-9 loss-of-function mutants, in which HIF is constitutively active, are egg-laying defective; the mechanism regulating egg laying downstream of HIF has been unknown. From a screen for suppressors of the egl-9(lf) egg-laying defect, we identified the gene cyp-36A1, which encodes a cytochrome P450 enzyme and is likely a direct transcriptional target of HIF. In addition to modulating egg-laying behavior downstream of HIF, CYP-36A1 controls expression of more than a third of HIF-upregulated genes and regulates multiple stress responses. A screen for suppressors of cyp-36A1(lf) identified the nuclear hormone receptor NHR-46. We propose that CYP-36A1 functions as a hormone biosynthetic enzyme for the ligand of this receptor, thus mediating gene expression changes that alter stress physiology and behavior. We also found site-of-action and genetic evidence for at least one additional pathway acting downstream of EGL-9 and HIF-1 to regulate egg-laying behavior. These studies have identified novel HIF effectors that broadly affect physiology and behavior in C. elegans, and reveal new avenues for future work on regulation of HIF-controlled biology.

Regulation of C. Elegans Behavior and Physiology by the Hypoxia-response Pathway

Regulation of C. Elegans Behavior and Physiology by the Hypoxia-response Pathway PDF Author: Corinne Lenore Pender
Publisher:
ISBN:
Category :
Languages : en
Pages : 232

Get Book Here

Book Description
The transcriptional response controlling adaptation to internal and environmental hypoxia is broadly conserved in animals. The key mediator of this response is the transcription factor HIF (hypoxia-inducible factor), which is active only in hypoxia due to the function of its negative regulators, the prolyl hydroxylase EGLN and the E3 ubiquitin ligase complex recognition subunit pVHL. HIF drives transcription of hundreds of targets that promote hypoxia adaptation. Recent work has also described important and broad roles for HIF outside of the traditional hypoxia response, including functions in immunity, oxidative and other stress responses, and behavior; how HIF targets drive these aspects of animal physiology is poorly understood. In this dissertation, I describe genetic analyses of the nematode C. elegans that have provided insight into the function of HIF targets in regulating animal physiology and behavior. The EGLN family was defined by the C. elegans homolog, EGL-9. Prior to the identification of EGL-9 as a HIF hydroxylase, our laboratory discovered the egl-9 gene from studies of egg-laying behavior. egl-9 loss-of-function mutants, in which HIF is constitutively active, are egg-laying defective; the mechanism regulating egg laying downstream of HIF has been unknown. From a screen for suppressors of the egl-9(lf) egg-laying defect, we identified the gene cyp-36A1, which encodes a cytochrome P450 enzyme and is likely a direct transcriptional target of HIF. In addition to modulating egg-laying behavior downstream of HIF, CYP-36A1 controls expression of more than a third of HIF-upregulated genes and regulates multiple stress responses. A screen for suppressors of cyp-36A1(lf) identified the nuclear hormone receptor NHR-46. We propose that CYP-36A1 functions as a hormone biosynthetic enzyme for the ligand of this receptor, thus mediating gene expression changes that alter stress physiology and behavior. We also found site-of-action and genetic evidence for at least one additional pathway acting downstream of EGL-9 and HIF-1 to regulate egg-laying behavior. These studies have identified novel HIF effectors that broadly affect physiology and behavior in C. elegans, and reveal new avenues for future work on regulation of HIF-controlled biology.

Studies of Hypoxia Response and Regulation of Hypoxia-inducible Factor HIF-1 in Caenorhabditis Elegans

Studies of Hypoxia Response and Regulation of Hypoxia-inducible Factor HIF-1 in Caenorhabditis Elegans PDF Author: Chuan Shen
Publisher:
ISBN:
Category :
Languages : en
Pages : 236

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Book Description
All aerobic organisms require molecular oxygen to generate metabolic energy for normal growth and survival. During evolution, multi-cellular organisms have developed and refined complex networks for adaptation to hypoxic environments at both systemic and cellular levels. Adaptation to hypoxia largely results from changes in the activity and expression of key proteins. These include proteins involved in increasing oxygen delivery to hypoxic tissues and proteins that facilitate glycolysis for anaerobic metabolism. The mammalian transcription factor hypoxia-inducible factor (HIF) is a master regulator of oxygen homeostasis. More than 100 target genes of HIF mediate broad systemic and local responses to hypoxia, including angiogenesis/vascular remodeling, erythropoiesis, glucose transport, glycolytic metabolism, and cell proliferation. Many human diseases such as myocardial ischemia, stroke, cancer, and chronic lung disease cause hypoxic stress, and HIF is a critical mediator for pathophysiological responses to hypoxia. Elucidating cellular and molecular mechanisms underlying regulation of HEF activity may enable novel therapeutic approaches. The C. elegans hif-1 gene is orthologous to mammalian HIF-alpha gene, and C. elegans has proven to be a powerful system for the study of hypoxia-inducible factor regulation and function. In this dissertation, I studied the role of HIF-1 in hypoxia response and initiated genetic studies to identify HIF-1 regulators in C. elegans. I demonstrate that C. elegans hif-1 regulates the majority of early transcriptional responses to hypoxia. My studies also provide clear evidence for HIF-1-independent pathways for adaptation to oxygen deprivation. Finally, I discovered a novel membrane-bound protein that regulates the activity of C. elegans HIF-1 in a potential negative feedback loop.

The Neurobiology of Olfaction

The Neurobiology of Olfaction PDF Author: Anna Menini
Publisher: CRC Press
ISBN: 1420071998
Category : Science
Languages : en
Pages : 438

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Book Description
Comprehensive Overview of Advances in OlfactionThe common belief is that human smell perception is much reduced compared with other mammals, so that whatever abilities are uncovered and investigated in animal research would have little significance for humans. However, new evidence from a variety of sources indicates this traditional view is likely

Oxygen Sensing

Oxygen Sensing PDF Author:
Publisher: Elsevier
ISBN: 0080497195
Category : Science
Languages : en
Pages : 867

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Book Description
The ability of cells to sense and respond to changes in oxygenation underlies a multitude of developmental, physiological, and pathological processes. This volume provides a comprehensive compendium of experimental approaches to the study of oxygen sensing in 48 chapters that are written by leaders in their fields.

Physiology of Nematodes

Physiology of Nematodes PDF Author: Donald Lewis Lee
Publisher: Palgrave
ISBN: 9781349026692
Category :
Languages : en
Pages : 228

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Book Description


Microbial Endocrinology

Microbial Endocrinology PDF Author: Mark Lyte
Publisher: Springer Science & Business Media
ISBN: 1441955763
Category : Medical
Languages : en
Pages : 325

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Book Description
Microbial endocrinology represents a newly emerging interdisciplinary field that is formed by the intersection of the fields of neurobiology and microbiology. This book will introduce a new perspective to the current understanding not only of the factors that mediate the ability of microbes to cause disease, but also to the mechanisms that maintain normal homeostasis. The discovery that microbes can directly respond to neuroendocrine hormones, as evidenced by increased growth and production of virulence-associated factors, provides for a new framework with which to investigate how microorganisms interface not only with vertebrates, but also with invertebrates and even plants. The reader will learn that the neuroendocrine hormones that one most commonly associates with mammals are actually found throughout the plant, insect and microbial communities to an extent that will undoubtedly surprise many, and most importantly, how interactions between microbes and neuroendocrine hormones can influence the pathophysiology of infectious disease.

Aging Mechanisms

Aging Mechanisms PDF Author: Nozomu Mori
Publisher: Springer
ISBN: 4431557636
Category : Medical
Languages : en
Pages : 435

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Book Description
This book brings together the most up-to-date information on recent research results of leading laboratories on aging science in East Asia, particularly in Japan, Korea, and Hong Kong. Starting with a comprehensive overview of various hypotheses on biological mechanisms of aging by Dr. Sataro Goto, each chapter covers broad aspects of the most recent findings in aging-related topics: centenarian studies and genome analysis of progeria, metabolic biochemistry and neurobiology, longevity controls in yeast and nematodes, oxidative stress and calorie restriction, and neurodegeneration mechanisms in Alzheimer’s and Huntington’s diseases, with further potential therapeutic approaches to these age-related neurodegenerative diseases. Also included, in part, is a summary and the outcomes of a scientific discussion forum called the Asian Aging Core for Longevity (AACL) that has been held annually alternating between Japan and Korea during the last decade. This book can serve as a useful resource for finding appropriate collaborators in the areas it covers. The target readership is made up of graduate students and researchers at universities, medical and/or life-science schools, and biomedical and pharmaceutical institutes. Why does aging exist? How do we age? How is each organism’s lifespan determined? These are fundamental questions in the field. We may be still far from achieving a complete view of aging mechanisms, but this book, Aging Mechanisms, offers an excellent opportunity to become familiar with the most updated progress in the biomedical research of aging in Japan and Korea, the two leading nations for human longevity.

C. Elegans Atlas

C. Elegans Atlas PDF Author: David H. Hall
Publisher: CSHL Press
ISBN: 0879697156
Category : Caenorhabditis elegans
Languages : en
Pages : 353

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Book Description
Derived from the acclaimed online “WormAtlas,†C. elegansAtlas is a large-format, full-color atlas of the hermaphroditic form of the model organism C. elegans, known affectionately as “the worm†by workers in the field. Prepared by the editors of the WormAtlas Consortium, David H. Hall and Zeynep F. Altun, this book combines explanatory text with copious, labeled, color illustrations and electron micrographs of the major body systems of C. elegans. Also included are electron microscopy cross sections of the worm. This laboratory reference is essential for the working worm biologist, at the bench and at the microscope, and provides a superb companion to the C. elegansII monograph. It is also a valuable tool for investigators in the fields of developmental biology, neurobiology, reproductive biology, gene expression, and molecular biology.

G Protein Pathways, Part A: Receptors

G Protein Pathways, Part A: Receptors PDF Author:
Publisher: Academic Press
ISBN: 0080884229
Category : Science
Languages : en
Pages : 719

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Book Description
G Protein Pathways is the first of three volumes examining the nature of heterotrimeric G proteins. The text takes an integrated approach to studying common experimental questions at many different levels related to G proteins. Methods related to G proteins using molecular modeling, systems biology, protein engineering, protein biochemistry, cell biology, and physiology are all accessible in the same volume.The critically acclaimed laboratory standard for more than forty years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Since 1955, each volume has been eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. Now with more than 300 volumes (all of them still in print), the series contains much material still relevant todaytruly an essential publication for researchers in all fields of life sciences.

Fas Signaling

Fas Signaling PDF Author: Harald Wajant
Publisher: Springer Science & Business Media
ISBN: 0387345736
Category : Medical
Languages : en
Pages : 169

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Book Description
Fas Signaling is focused on the signaling mechanisms and biology of the prototypic death receptor Fas, also called CD95 or APO-1. The chapters of this book cover, besides the well recognized apoptosis-related functions of Fas, its emerging role as a proinflammatory cytokine and as an inducer of alternative forms of cell death. Fas Signaling aims to provide the reader with an up-to-date survey of the various aspects of Fas biology and the open questions of the field are addressed. This title is intended for Ph.D and post-doctoral students starting to work in the field, but is also useful for everyone with an interest in the biology of this exciting molecule.