Physical Models of Living Systems

Physical Models of Living Systems PDF Author: Philip Nelson
Publisher: Macmillan Higher Education
ISBN: 1319036902
Category : Science
Languages : en
Pages : 365

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Book Description
Written for intermediate-level undergraduates pursuing any science or engineering major, Physical Models of Living Systems helps students develop many of the competencies that form the basis of the new MCAT2015. The only prerequisite is first-year physics. With the more advanced "Track-2" sections at the end of each chapter, the book can be used in graduate-level courses as well.

Models of Life

Models of Life PDF Author: Kim Sneppen
Publisher: Cambridge University Press
ISBN: 1107061903
Category : Science
Languages : en
Pages : 353

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Book Description
An overview of current models of biological systems, reflecting the major advances that have been made over the past decade.

From Photon to Neuron

From Photon to Neuron PDF Author: Philip Nelson
Publisher: Princeton University Press
ISBN: 1400885485
Category : Science
Languages : en
Pages : 512

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Book Description
A richly illustrated undergraduate textbook on the physics and biology of light Students in the physical and life sciences, and in engineering, need to know about the physics and biology of light. Recently, it has become increasingly clear that an understanding of the quantum nature of light is essential, both for the latest imaging technologies and to advance our knowledge of fundamental life processes, such as photosynthesis and human vision. From Photon to Neuron provides undergraduates with an accessible introduction to the physics of light and offers a unified view of a broad range of optical and biological phenomena. Along the way, this richly illustrated textbook builds the necessary background in neuroscience, photochemistry, and other disciplines, with applications to optogenetics, superresolution microscopy, the single-photon response of individual photoreceptor cells, and more. With its integrated approach, From Photon to Neuron can be used as the basis for interdisciplinary courses in physics, biophysics, sensory neuroscience, biophotonics, bioengineering, or nanotechnology. The goal is always for students to gain the fluency needed to derive every result for themselves, so the book includes a wealth of exercises, including many that guide students to create computer-based solutions. Supplementary online materials include real experimental data to use with the exercises. Assumes familiarity with first-year undergraduate physics and the corresponding math Overlaps the goals of the MCAT, which now includes data-based and statistical reasoning Advanced chapters and sections also make the book suitable for graduate courses An Instructor's Guide and illustration package is available to professors

Physical Biology of the Cell

Physical Biology of the Cell PDF Author: Rob Phillips
Publisher: Garland Science
ISBN: 1134111584
Category : Science
Languages : en
Pages : 1089

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Book Description
Physical Biology of the Cell is a textbook for a first course in physical biology or biophysics for undergraduate or graduate students. It maps the huge and complex landscape of cell and molecular biology from the distinct perspective of physical biology. As a key organizing principle, the proximity of topics is based on the physical concepts that

Multistability in Physical and Living Systems

Multistability in Physical and Living Systems PDF Author: Alexander N. Pisarchik
Publisher: Springer Nature
ISBN: 303098396X
Category : Science
Languages : en
Pages : 417

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Book Description
This book starts with an introduction to the basic concepts of multistability, then illustrates how multistability arises in different systems and explains the main mechanisms of multistability emergence. A special attention is given to noise which can convert a multistable deterministic system to a monostable stochastic one. Furthermore, the most important applications of multistability in different areas of science, engineering and technology are given attention throughout the book, including electronic circuits, lasers, secure communication, and human perception. The book aims to provide a first approach to multistability for readers, who are interested in understanding its fundamental concepts and applications in several fields. This book will be useful not only to researchers and engineers focusing on interdisciplinary studies, but also to graduate students and technicians. Both theoreticians and experimentalists will rely on it, in fields ranging from mathematics and laser physics to neuroscience and astronomy. The book is intended to fill a gap in the literature, to stimulate new discussions and bring some fundamental issues to a deeper level of understanding of the mechanisms underlying self-organization of matter and world complexity.

Physical Models of Living Systems

Physical Models of Living Systems PDF Author: Philip Nelson
Publisher: Chiliagon Science
ISBN: 9781737540243
Category : Science
Languages : en
Pages : 492

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Book Description
Award-winning prof brings you from first-year classes to the frontiers of systems and synthetic biology, epidemic modeling, and imaging. Physical Models of Living Systems first develops the frameworks needed to understand modern ideas about inference from data, as they relate to biological physics research. Later chapters develop stochastic simulation as a tool to handle more complex systems, and then dynamical systems theory applied to cellular control networks, both natural and synthetic. Along the way, you'll also see the foundations of revolutionary advances in imaging (superresolution and cryo-electron microscopy), along with epidemic modeling, mechanobiology, excitable media, and more. The text also has significant overlap with competencies covered in the MCAT exam. Dozens of problems at all levels, many of them new in this edition, will help you to gain simulation and data visualization skills useful in any branch of quantitative science research.

Biophysics

Biophysics PDF Author: William Bialek
Publisher: Princeton University Press
ISBN: 1400845572
Category : Science
Languages : en
Pages : 653

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Book Description
A physicist's guide to the phenomena of life Interactions between the fields of physics and biology reach back over a century, and some of the most significant developments in biology—from the discovery of DNA's structure to imaging of the human brain—have involved collaboration across this disciplinary boundary. For a new generation of physicists, the phenomena of life pose exciting challenges to physics itself, and biophysics has emerged as an important subfield of this discipline. Here, William Bialek provides the first graduate-level introduction to biophysics aimed at physics students. Bialek begins by exploring how photon counting in vision offers important lessons about the opportunities for quantitative, physics-style experiments on diverse biological phenomena. He draws from these lessons three general physical principles—the importance of noise, the need to understand the extraordinary performance of living systems without appealing to finely tuned parameters, and the critical role of the representation and flow of information in the business of life. Bialek then applies these principles to a broad range of phenomena, including the control of gene expression, perception and memory, protein folding, the mechanics of the inner ear, the dynamics of biochemical reactions, and pattern formation in developing embryos. Featuring numerous problems and exercises throughout, Biophysics emphasizes the unifying power of abstract physical principles to motivate new and novel experiments on biological systems. Covers a range of biological phenomena from the physicist's perspective Features 200 problems Draws on statistical mechanics, quantum mechanics, and related mathematical concepts Includes an annotated bibliography and detailed appendixes

A Student's Guide to Python for Physical Modeling

A Student's Guide to Python for Physical Modeling PDF Author: Jesse M. Kinder
Publisher: Princeton University Press
ISBN: 0691223661
Category : Science
Languages : en
Pages : 241

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Book Description
A fully updated tutorial on the basics of the Python programming language for science students Python is a computer programming language that has gained popularity throughout the sciences. This fully updated second edition of A Student's Guide to Python for Physical Modeling aims to help you, the student, teach yourself enough of the Python programming language to get started with physical modeling. You will learn how to install an open-source Python programming environment and use it to accomplish many common scientific computing tasks: importing, exporting, and visualizing data; numerical analysis; and simulation. No prior programming experience is assumed. This guide introduces a wide range of useful tools, including: Basic Python programming and scripting Numerical arrays Two- and three-dimensional graphics Animation Monte Carlo simulations Numerical methods, including solving ordinary differential equations Image processing Numerous code samples and exercises—with solutions—illustrate new ideas as they are introduced. This guide also includes supplemental online resources: code samples, data sets, tutorials, and more. This edition includes new material on symbolic calculations with SymPy, an introduction to Python libraries for data science and machine learning (pandas and sklearn), and a primer on Python classes and object-oriented programming. A new appendix also introduces command line tools and version control with Git.

Fundamentals of Systems Biology

Fundamentals of Systems Biology PDF Author: Markus W. Covert
Publisher: CRC Press
ISBN: 1498728472
Category : Technology & Engineering
Languages : en
Pages : 356

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Book Description
For decades biology has focused on decoding cellular processes one gene at a time, but many of the most pressing biological questions, as well as diseases such as cancer and heart disease, are related to complex systems involving the interaction of hundreds, or even thousands, of gene products and other factors. How do we begin to understand this complexity? Fundamentals of Systems Biology: From Synthetic Circuits to Whole-cell Models introduces students to methods they can use to tackle complex systems head-on, carefully walking them through studies that comprise the foundation and frontier of systems biology. The first section of the book focuses on bringing students quickly up to speed with a variety of modeling methods in the context of a synthetic biological circuit. This innovative approach builds intuition about the strengths and weaknesses of each method and becomes critical in the book’s second half, where much more complicated network models are addressed—including transcriptional, signaling, metabolic, and even integrated multi-network models. The approach makes the work much more accessible to novices (undergraduates, medical students, and biologists new to mathematical modeling) while still having much to offer experienced modelers--whether their interests are microbes, organs, whole organisms, diseases, synthetic biology, or just about any field that investigates living systems.

The Systems View of Life

The Systems View of Life PDF Author: Fritjof Capra
Publisher: Cambridge University Press
ISBN: 1107011361
Category : Business & Economics
Languages : en
Pages : 513

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Book Description
The first volume to integrate life's biological, cognitive, social, and ecological dimensions into a single, coherent framework.