Individual-based Modeling and Ecology

Individual-based Modeling and Ecology PDF Author: Volker Grimm
Publisher: Princeton University Press
ISBN: 1400850622
Category : Science
Languages : en
Pages : 445

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Book Description
Individual-based models are an exciting and widely used new tool for ecology. These computational models allow scientists to explore the mechanisms through which population and ecosystem ecology arises from how individuals interact with each other and their environment. This book provides the first in-depth treatment of individual-based modeling and its use to develop theoretical understanding of how ecological systems work, an approach the authors call "individual-based ecology.? Grimm and Railsback start with a general primer on modeling: how to design models that are as simple as possible while still allowing specific problems to be solved, and how to move efficiently through a cycle of pattern-oriented model design, implementation, and analysis. Next, they address the problems of theory and conceptual framework for individual-based ecology: What is "theory"? That is, how do we develop reusable models of how system dynamics arise from characteristics of individuals? What conceptual framework do we use when the classical differential equation framework no longer applies? An extensive review illustrates the ecological problems that have been addressed with individual-based models. The authors then identify how the mechanics of building and using individual-based models differ from those of traditional science, and provide guidance on formulating, programming, and analyzing models. This book will be helpful to ecologists interested in modeling, and to other scientists interested in agent-based modeling.

Individual-based Modeling and Ecology

Individual-based Modeling and Ecology PDF Author: Volker Grimm
Publisher: Princeton University Press
ISBN: 1400850622
Category : Science
Languages : en
Pages : 445

Get Book Here

Book Description
Individual-based models are an exciting and widely used new tool for ecology. These computational models allow scientists to explore the mechanisms through which population and ecosystem ecology arises from how individuals interact with each other and their environment. This book provides the first in-depth treatment of individual-based modeling and its use to develop theoretical understanding of how ecological systems work, an approach the authors call "individual-based ecology.? Grimm and Railsback start with a general primer on modeling: how to design models that are as simple as possible while still allowing specific problems to be solved, and how to move efficiently through a cycle of pattern-oriented model design, implementation, and analysis. Next, they address the problems of theory and conceptual framework for individual-based ecology: What is "theory"? That is, how do we develop reusable models of how system dynamics arise from characteristics of individuals? What conceptual framework do we use when the classical differential equation framework no longer applies? An extensive review illustrates the ecological problems that have been addressed with individual-based models. The authors then identify how the mechanics of building and using individual-based models differ from those of traditional science, and provide guidance on formulating, programming, and analyzing models. This book will be helpful to ecologists interested in modeling, and to other scientists interested in agent-based modeling.

Individual-Based Models and Approaches In Ecology

Individual-Based Models and Approaches In Ecology PDF Author: D. L. DeAngelis
Publisher: CRC Press
ISBN: 1351090364
Category : Mathematics
Languages : en
Pages : 577

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Book Description
Until fairly recently, populations were handled as homogenized averages, which made modeling feasible but which ignored the essential fact that in any population there is a great variety of individuals of different ages, sizes, and degrees of fitness. Recently, because of the increased availability of affordable computer power, approaches have been developed which are able to recognize individual differences. Individual-based models are of great use in the areas of aquatic ecology, terrestrial ecology, landscape or physiological ecology, terrestrial ecology, landscape or physiological ecology, and agriculture. This book discusses which biological problems individual-based models can solve, as well as the models' inherent limitations. It explores likely future directions of theoretical development in these models, as well as currently feasible management applications and the best mathematical approaches and computer languages to use. The book also details specific applications to theory and management.

Individual-Based Models of Cultural Evolution

Individual-Based Models of Cultural Evolution PDF Author: Alberto Acerbi
Publisher: Taylor & Francis
ISBN: 1000602036
Category : Psychology
Languages : en
Pages : 223

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Book Description
Individual-Based Models of Cultural Evolution shows readers how to create individual-based models of cultural evolution using the programming language R. The field of cultural evolution has emerged in the last few decades as a thriving, interdisciplinary effort to understand cultural change and cultural diversity within an evolutionary framework and using evolutionary tools, concepts, and methods. Given its roots in evolutionary biology, much of cultural evolution is grounded in, or inspired by, formal models. Yet many researchers interested in cultural evolution come from backgrounds that lack training in formal modelling, such as psychology, anthropology or archaeology. This book addresses that gap. It provides example code in R for readers to run their own models, moving from very simple models of the basic processes of cultural evolution, such as biased transmission and cultural mutation, to more advanced topics such as the evolution of social learning, demographic effects, and social network analysis. Features of this book: Recreates existing models in the literature to show how these were created and to enable readers to have a better understanding of their significance and how to apply them to their own research questions Provides full R code to realize models and analyse and plot outputs, with line-by-line analysis Requires no previous knowledge of the field of cultural evolution, and only very basic programming knowledge This is an essential resource for researchers and students interested in cultural evolution, including disciplines such as psychology, anthropology, archaeology, and biology as well as sociology and digital humanities.

Agent-Based and Individual-Based Modeling

Agent-Based and Individual-Based Modeling PDF Author: Steven F. Railsback
Publisher: Princeton University Press
ISBN: 0691190836
Category : Science
Languages : en
Pages : 358

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Book Description
The essential textbook on agent-based modeling—now fully updated and expanded Agent-Based and Individual-Based Modeling has become the standard textbook on the subject for classroom use and self-instruction. Drawing on the latest version of NetLogo and fully updated with new examples, exercises, and an enhanced text for easier comprehension, this is the essential resource for anyone seeking to understand how the dynamics of biological, social, and other complex systems arise from the characteristics of the agents that make up these systems. Steven Railsback and Volker Grimm lead students stepwise through the processes of designing, programming, documenting, and doing scientific research with agent-based models, focusing on the adaptive behaviors that make these models necessary. They cover the fundamentals of modeling and model analysis, introduce key modeling concepts, and demonstrate how to implement them using NetLogo. They also address pattern-oriented modeling, an invaluable strategy for modeling real-world problems and developing theory. This accessible and authoritative book focuses on modeling as a tool for understanding real complex systems. It explains how to pose a specific question, use observations from actual systems to design models, write and test software, and more. A hands-on introduction that guides students from conceptual design to computer implementation to analysis Filled with new examples and exercises and compatible with the latest version of NetLogo Ideal for students and researchers across the natural and social sciences Written by two leading practitioners Supported by extensive instructional materials at www.railsback-grimm-abm-book.com

An Introduction to Models in the Social Sciences

An Introduction to Models in the Social Sciences PDF Author: Charles A. Lave
Publisher: University Press of America
ISBN: 9780819183811
Category : Social Science
Languages : en
Pages : 436

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Book Description
What is a model? How do you construct one? What are some common models in the social sciences? How can models be applied in new situations? What makes a model good? Focusing on answers to these and related questions, this multidisciplinary introduction to model building in the social sciences formulates interesting problems that involve students in creative model building and the process of invention. The book describes models of individual choice, exchange, adaptation, and diffusion. Throughout, student participation in analytical thinking is encouraged. Originally published in 1975 by HarperCollins Publishers.

The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling

The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling PDF Author: Johan H. J. Leveau
Publisher: Frontiers Media SA
ISBN: 2889457494
Category :
Languages : en
Pages : 187

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Book Description
Recent technological advances in single-cell microbiology, using flow cytometry, microfluidics, x-ray fluorescence microprobes, and single-cell -omics, allow for the observation of individuals within populations. Simultaneously, individual-based models (or more generally agent-based models) allow for individual microbes to be simulated. Bridging these techniques forms the foundation of individual-based ecology of microbes (µIBE). µIBE has elucidated genetic and phenotypic heterogeneity that has important consequences for a number of human interests, including antibiotic or biocide resistance, the productivity and stability of industrial fermentations, the efficacy of food preservatives, and the potential of pathogens to cause disease. Individual-based models can help us to understand how these sets of traits of individual microbes influence the above. This eBook compiles all publications from a recent Research Topic in Frontiers in Microbiology. It features recent research where individual observational and/or modelling techniques are applied to gain unique insights into the ecology of microorganisms. The Research Topic “The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling” arose from the 2016 @ASM conference of the same name hosted by the American Society for Microbiology at its headquarters in Washington, D.C. We are grateful to ASM for funding and hosting this conference.

The Wiley Encyclopedia of Personality and Individual Differences, Models and Theories

The Wiley Encyclopedia of Personality and Individual Differences, Models and Theories PDF Author:
Publisher: John Wiley & Sons
ISBN: 1119793912
Category : Psychology
Languages : en
Pages : 480

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Book Description
Volume 1, Models and Theories of The Wiley Encyclopedia of Personality and Individual Differences The Encyclopedia of Personality and Individual Differences (EPID) is organized into four volumes that look at the many likenesses and differences between individuals. Each of these four volumes focuses on a major content area in the study of personality psychology and individuals' differences. The first volume, Models and Theories, surveys the significant classic and contemporary viewpoints, perspectives, models, and theoretical approaches to the study of personality and individuals' differences (PID). The second volume on Measurement and Assessment examines key classic and modern methods and techniques of assessment in the study of PID. Volume III, titled Personality Processes and Individuals Differences, covers the important traditional and current dimensions, constructs, and traits in the study of PID. The final volume discusses three major categories: clinical contributions, applied research, and cross-cultural considerations, and touches on topics such as culture and identity, multicultural identities, cross-cultural examinations of trait structures and personality processes, and more. Each volume contains approximately 100 entries on personality and individual differences written by a diverse international panel of leading psychologists Covers significant classic and contemporary personality psychology models and theories, measurement and assessment techniques, personality processes and individuals differences, and research Provides a comprehensive and in-depth overview of the field of personality psychology The Encyclopedia of Personality and Individual Differences is an important resource for all psychology students and professionals engaging in the study and research of personality.

Individual-based Model Formulation for Cutthroat Trout, Little Jones Creek, California

Individual-based Model Formulation for Cutthroat Trout, Little Jones Creek, California PDF Author: Steven Floyd Railsback
Publisher:
ISBN:
Category : Cutthroat trout
Languages : en
Pages : 92

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Book Description


Individual-based Model Formulation for Cutthroat Trout, Little Jones Creek, California

Individual-based Model Formulation for Cutthroat Trout, Little Jones Creek, California PDF Author: Steven F. Railsback
Publisher:
ISBN:
Category : Cutthroat trout
Languages : en
Pages : 92

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Book Description


The Statistical Physics of Fixation and Equilibration in Individual-Based Models

The Statistical Physics of Fixation and Equilibration in Individual-Based Models PDF Author: Peter Ashcroft
Publisher: Springer
ISBN: 3319412132
Category : Science
Languages : en
Pages : 175

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Book Description
This thesis explores several interdisciplinary topics at the border of theoretical physics and biology, presenting results that demonstrate the power of methods from statistical physics when applied to neighbouring disciplines. From birth-death processes in switching environments to discussions on the meaning of quasi-potential landscapes in high-dimensional spaces, this thesis is a shining example of the efficacy of interdisciplinary research. The fields advanced in this work include game theory, the dynamics of cancer, and invasion of mutants in resident populations, as well as general contributions to the theory of stochastic processes. The background material provides an intuitive introduction to the theory and applications of stochastic population dynamics, and the use of techniques from statistical physics in their analysis. The thesis then builds on these foundations to address problems motivated by biological phenomena.