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Author: Hisao Honda
Publisher: Springer Nature
ISBN: 9811929165
Category : Science
Languages : en
Pages : 195
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Book Description
This book describes the shape formation of living organisms using mathematical models. Genes are deeply related to the shape of living organisms, and elucidation of a pathway of shape formation from genes is one of the fundamental problems in biology. Mathematical cell models are indispensable tools to elucidate this problem. The book introduces two mathematical cell models, the cell center model and the vertex model, with their applications. The cell center model is applied to elucidate the formation of neat cell arrangements in epidermis, cell patterns consisting of heterogeneous-sized cells, capillary networks, and the branching patterns of blood vessels. The vertex model is applied to elucidate the wound healing mechanisms of the epithelium and ordered pattern formation involving apoptosis. Pattern formation with differential cell adhesion is also described. The vertex model is then extended from a two-dimensional (2D) to a three-dimensional (3D) model. A cell aggregate involving a large cavity is described to explain the development of the mammalian blastocyst or the formation of an epithelial vesicle. Epithelial tissues and the polarity formation process of the epithelium are also explained. The vertex model also recapitulates active remodeling of tissues and describes the twisting of tissue that contributes to understanding the cardiac loop formation of the embryonic tube. The book showcases that mathematical cell models are indispensable tools to understand the shape formation of living organisms. Successful contribution of the mathematical cell models means that the remodeling of collective cells is self-construction. Examining the successive iterations of self-constructions leads to understanding the remarkable and mysterious morphogenesis that occurs during the development of living organisms. The intended readers of this book are not only theoretical or mathematical biologists, but also experimental and general biologists, including undergraduate and postgraduate students who are interested in the relationship between genes and morphogenesis.
Author: Hisao Honda
Publisher: Springer Nature
ISBN: 9811929165
Category : Science
Languages : en
Pages : 195
Get Book
Book Description
This book describes the shape formation of living organisms using mathematical models. Genes are deeply related to the shape of living organisms, and elucidation of a pathway of shape formation from genes is one of the fundamental problems in biology. Mathematical cell models are indispensable tools to elucidate this problem. The book introduces two mathematical cell models, the cell center model and the vertex model, with their applications. The cell center model is applied to elucidate the formation of neat cell arrangements in epidermis, cell patterns consisting of heterogeneous-sized cells, capillary networks, and the branching patterns of blood vessels. The vertex model is applied to elucidate the wound healing mechanisms of the epithelium and ordered pattern formation involving apoptosis. Pattern formation with differential cell adhesion is also described. The vertex model is then extended from a two-dimensional (2D) to a three-dimensional (3D) model. A cell aggregate involving a large cavity is described to explain the development of the mammalian blastocyst or the formation of an epithelial vesicle. Epithelial tissues and the polarity formation process of the epithelium are also explained. The vertex model also recapitulates active remodeling of tissues and describes the twisting of tissue that contributes to understanding the cardiac loop formation of the embryonic tube. The book showcases that mathematical cell models are indispensable tools to understand the shape formation of living organisms. Successful contribution of the mathematical cell models means that the remodeling of collective cells is self-construction. Examining the successive iterations of self-constructions leads to understanding the remarkable and mysterious morphogenesis that occurs during the development of living organisms. The intended readers of this book are not only theoretical or mathematical biologists, but also experimental and general biologists, including undergraduate and postgraduate students who are interested in the relationship between genes and morphogenesis.
Author: Alexander Anderson
Publisher: Springer Science & Business Media
ISBN: 376438123X
Category : Mathematics
Languages : en
Pages : 346
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Book Description
Aimed at postgraduate students in a variety of biology-related disciplines, this volume presents a collection of mathematical and computational single-cell-based models and their application. The main sections cover four general model groupings: hybrid cellular automata, cellular potts, lattice-free cells, and viscoelastic cells. Each section is introduced by a discussion of the applicability of the particular modelling approach and its advantages and disadvantages, which will make the book suitable for students starting research in mathematical biology as well as scientists modelling multicellular processes.
Author: Philip K. Maini
Publisher: Springer Science & Business Media
ISBN: 1461301335
Category : Mathematics
Languages : en
Pages : 327
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Book Description
This 121st IMA volume, entitled MATHEMATICAL MODELS FOR BIOLOGICAL PATTERN FORMATION is the first of a new series called FRONTIERS IN APPLICATION OF MATHEMATICS. The FRONTIERS volumes are motivated by IMA pro grams and workshops, but are specially planned and written to provide an entree to and assessment of exciting new areas for the application of mathematical tools and analysis. The emphasis in FRONTIERS volumes is on surveys, exposition and outlook, to attract more mathematicians and other scientists to the study of these areas and to focus efforts on the most important issues, rather than papers on the most recent research results aimed at an audience of specialists. The present volume of peer-reviewed papers grew out of the 1998-99 IMA program on "Mathematics in Biology," in particular the Fall 1998 em phasis on "Theoretical Problems in Developmental Biology and Immunol ogy." During that period there were two workshops on Pattern Formation and Morphogenesis, organized by Professors Murray, Maini and Othmer. James Murray was one of the principal organizers for the entire year pro gram. I am very grateful to James Murray for providing an introduction, and to Philip Maini and Hans Othmer for their excellent work in planning and preparing this first FRONTIERS volume. I also take this opportunity to thank the National Science Foundation, whose financial support of the IMA made the Mathematics in Biology pro gram possible.
Author: René Thom
Publisher:
ISBN:
Category : Medical
Languages : en
Pages : 320
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Book Description
Author: Luigi Preziosi
Publisher: Springer
ISBN: 3319426796
Category : Mathematics
Languages : en
Pages : 321
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Book Description
The aim of these lecture notes is to give an introduction to several mathematical models and methods that can be used to describe the behaviour of living systems. This emerging field of application intrinsically requires the handling of phenomena occurring at different spatial scales and hence the use of multiscale methods.Modelling and simulating the mechanisms that cells use to move, self-organise and develop in tissues is not only fundamental to an understanding of embryonic development, but is also relevant in tissue engineering and in other environmental and industrial processes involving the growth and homeostasis of biological systems. Growth and organization processes are also important in many tissue degeneration and regeneration processes, such as tumour growth, tissue vascularization, heart and muscle functionality, and cardio-vascular diseases.
Author: Vincenzo Capasso
Publisher: Springer Science & Business Media
ISBN: 3642201644
Category : Mathematics
Languages : en
Pages : 283
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Book Description
Pattern Formation in Morphogenesis is a rich source of interesting and challenging mathematical problems. The volume aims at showing how a combination of new discoveries in developmental biology and associated modelling and computational techniques has stimulated or may stimulate relevant advances in the field. Finally it aims at facilitating the process of unfolding a mutual recognition between Biologists and Mathematicians of their complementary skills, to the point where the resulting synergy generates new and novel discoveries. It offers an interdisciplinary interaction space between biologists from embryology, genetics and molecular biology who present their own work in the perspective of the advancement of their specific fields, and mathematicians who propose solutions based on the knowledge grasped from biologists.
Author: Richard J. Morris
Publisher: Springer
ISBN: 3319990705
Category : Science
Languages : en
Pages : 219
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Book Description
Progress in plant biology relies on the quantification, analysis and mathematical modeling of data over different time and length scales. This book describes common mathematical and computational approaches as well as some carefully chosen case studies that demonstrate the use of these techniques to solve problems at the forefront of plant biology. Each chapter is written by an expert in field with the goal of conveying concepts whilst at the same time providing sufficient background and links to available software for readers to rapidly build their own models and run their own simulations. This book is aimed at postgraduate students and researchers working the field of plant systems biology and synthetic biology, but will also be a useful reference for anyone wanting to get into quantitative plant biology.
Author: George D. Mostow
Publisher:
ISBN: 9780300015980
Category : Biology
Languages : en
Pages : 271
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Book Description
Author: Viktor Vladimirovich Ivanov
Publisher: Elsevier Science Limited
ISBN: 0444527141
Category : Computers
Languages : en
Pages : 333
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Book Description
The book contains five main parts: Introduction: Evolutionary System and Development Modelling; Part I: A Survey of MM of CAO (cell associated objects); Part II: MM (mathematical models) of Development; Part III: Introduction to Applications; Appendix: Mathematics of Development. The part I gives the reader a survey of hundreds results in the field of the cell and cell associated objects modelling, which are not easy accessible. The original four parts of the book have no analogy in the literature, except the previous book of the first author 'Model Development and Optimization', KAP, 1999, and the book 'Mathematical Modeling in Economics, Ecology and the Environment', KAP, 1999, by N. Hritonenko, Yu. Yatsenko (Yu. Yatsenko is a pupil of the first author of the cell book). The present book is different from the previous mainly by much more profound investigation of such a complicated object as the cell and by much more detailed description of applications to modelling AIDS, cancers, and life longevity. Key features: - Inlet novel class of non-linear mathematical models based on the general theory of evolutionary systems and their development . - Introducing and proving fundamental properties of evolutionary systems on optimal distribution of their various resources on their internal and external functions. - Proof of effective applicability of that class of models to complicated objects such as the cell and the immune network . - Detailed modelling complicated processes such as the cell cycle, protein folding, immune network response, etc. - Detailed analysis of applications to modelling AIDS, cancers, and life longevity. - Introducing and grounding the respective numerical algorithms and software. - Detailed analysis of hundreds of scientific works in the field of mathematical modelling of the cell and cell associated objects. Key features: - Inlet novel class of non-linear mathematical models based on the general theory of evolutionary systems and their development . - Introducing and proving fundamental properties of evolutionary systems on optimal distribution of their various resources on their internal and external functions. - Proof of effective applicability of that class of models to complicated objects such as the cell and the immune network . - Detailed modelling complicated processes such as the cell cycle, protein folding, immune network response, etc. - Detailed analysis of applications to modelling AIDS, cancers, and life longevity. - Introducing and grounding the respective numerical algorithms and software. - Detailed analysis of hundreds of scientific works in the field of mathematical modelling of the cell and cell associated objects.
Author: Andreas Deutsch
Publisher: Springer Science & Business Media
ISBN: 0817644156
Category : Science
Languages : en
Pages : 331
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Book Description
This book focuses on a challenging application field of cellular automata: pattern formation in biological systems, such as the growth of microorganisms, dynamics of cellular tissue and tumors, and formation of pigment cell patterns. These phenomena, resulting from complex cellular interactions, cannot be deduced solely from experimental analysis, but can be more easily examined using mathematical models, in particular, cellular automaton models. While there are various books treating cellular automaton modeling, this interdisciplinary work is the first one covering biological applications. The book is aimed at researchers, practitioners, and students in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science interested in a cellular automaton approach to biological modeling.
