High Order Hybrid Discontinuous Galerkin Regional Ocean Modelling

High Order Hybrid Discontinuous Galerkin Regional Ocean Modelling PDF Author: Mattheus Percy Ueckermann
Publisher:
ISBN:
Category :
Languages : en
Pages : 357

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Book Description
Accurate modeling of physical and biogeochemical dynamics in coastal ocean regions is required for multiple scientific and societal applications, covering a wide range of time and space scales. However, in light of the strong nonlinearities observed in coastal regions and in biological processes, such modeling is challenging. An important subject that has been largely overlooked is the numerical requirements for regional ocean simulation studies. Major objectives of this thesis are to address such computational questions for non-hydrostatic multiscale flows and for biogeochemical interactions, and to derive and develop numerical schemes that meet these requirements, utilizing the latest advances in computational fluid dynamics. We are interested in studying nonlinear, transient, and multiscale ocean dynamics over complex geometries with steep bathymetry and intricate coastlines, from sub-mesoscales to basin-scales. These dynamical interests, when combined with our requirements for accurate, efficient and flexible ocean modeling, led us to develop new variable resolution, higher-order and non-hydrostatic ocean modeling schemes. Specifically, we derived, developed and applied new numerical schemes based on the novel hybrid discontinuous Galerkin (HDG) method in combination with projection methods. The new numerical schemes are first derived for the Navier-Stokes equations. To ensure mass conservation, we define numerical fluxes that are consistent with the discrete divergence equation. To improve stability and accuracy, we derive a consistent HDG stability parameter for the pressure-correction equation. We also apply a new boundary condition for the pressure-corrector, and show the form and origin of the projection method's time-splitting error for a case with implicit diffusion and explicit advection. Our scheme is implemented for arbitrary, mixed-element unstructured grids using a novel quadrature-free integration method for a nodal basis, which is consistent with the HDG method. To prevent numerical oscillations, we design a selective high-order nodal limiter. We demonstrate the correctness of our new schemes using a tracer advection benchmark, a manufactured solution for the steady diffusion and stokes equations, and the 2D lock-exchange problem. These numerical schemes are then extended for non-hydrostatic, free-surface, variable-density regional ocean dynamics. The time-splitting procedure using projection methods is derived for non-hydrostatic or hydrostatic, and nonlinear free-surface or rigid-lid, versions of the model. We also derive consistent HDG stability parameters for the free-surface and non-hydrostatic pressure-corrector equations to ensure stability and accuracy. New boundary conditions for the free-surface-corrector and pressure-corrector are also introduced. We prove that these conditions lead to consistent boundary conditions for the free-surface and pressure proper. To ensure discrete mass conservation with a moving free-surface, we use an arbitrary Lagrangian- Eulerian (ALE) moving mesh algorithm. These schemes are again verified, this time using a tidal flow problem with analytical solutions and a 3D lock-exchange benchmark. We apply our new numerical schemes to evaluate the numerical requirements of the coupled biological-physical dynamics. We find that higher-order schemes are more accurate at the same efficiency compared to lower-order (e.g. second-order) accurate schemes when modeling a biological patch. Due to decreased numerical dissipation, the higher-order schemes are capable of modeling biological patchiness over a sustained duration, while the lower-order schemes can lose significant biomass after a few non-dimensional times and can thus solve erroneous nonlinear dynamics. Finally, inspired by Stellwagen Bank in Massachusetts Bay, we study the effect of non-hydrostatic physics on biological productivity and phytoplankton fields for tidally-driven flows over an idealized bank. We find that the non-hydrostatic pressure and flows are important for biological dynamics, especially when flows are supercritical. That is, when the slope of the topography is larger than the slope of internal wave rays at the tidal frequency. The non-hydrostatic effects increase with increasing nonlinearity, both when the internal Froude number and criticality parameter increase. Even in cases where the instantaneous biological productivity is not largely modified, we find that the total biomass, spatial variability and patchiness of phytoplankton can be significantly altered by non-hydrostatic processes. Our ultimate dynamics motivation is to allow quantitative simulation studies of fundamental nonlinear biological-physical dynamics in coastal regions with complex bathymetric features such as straits, sills, ridges and shelfbreaks. This thesis develops the necessary numerical schemes that meet the stringent accuracy requirements for these types of flows and dynamics.

High Order Hybrid Discontinuous Galerkin Regional Ocean Modelling

High Order Hybrid Discontinuous Galerkin Regional Ocean Modelling PDF Author: Mattheus Percy Ueckermann
Publisher:
ISBN:
Category :
Languages : en
Pages : 357

Get Book Here

Book Description
Accurate modeling of physical and biogeochemical dynamics in coastal ocean regions is required for multiple scientific and societal applications, covering a wide range of time and space scales. However, in light of the strong nonlinearities observed in coastal regions and in biological processes, such modeling is challenging. An important subject that has been largely overlooked is the numerical requirements for regional ocean simulation studies. Major objectives of this thesis are to address such computational questions for non-hydrostatic multiscale flows and for biogeochemical interactions, and to derive and develop numerical schemes that meet these requirements, utilizing the latest advances in computational fluid dynamics. We are interested in studying nonlinear, transient, and multiscale ocean dynamics over complex geometries with steep bathymetry and intricate coastlines, from sub-mesoscales to basin-scales. These dynamical interests, when combined with our requirements for accurate, efficient and flexible ocean modeling, led us to develop new variable resolution, higher-order and non-hydrostatic ocean modeling schemes. Specifically, we derived, developed and applied new numerical schemes based on the novel hybrid discontinuous Galerkin (HDG) method in combination with projection methods. The new numerical schemes are first derived for the Navier-Stokes equations. To ensure mass conservation, we define numerical fluxes that are consistent with the discrete divergence equation. To improve stability and accuracy, we derive a consistent HDG stability parameter for the pressure-correction equation. We also apply a new boundary condition for the pressure-corrector, and show the form and origin of the projection method's time-splitting error for a case with implicit diffusion and explicit advection. Our scheme is implemented for arbitrary, mixed-element unstructured grids using a novel quadrature-free integration method for a nodal basis, which is consistent with the HDG method. To prevent numerical oscillations, we design a selective high-order nodal limiter. We demonstrate the correctness of our new schemes using a tracer advection benchmark, a manufactured solution for the steady diffusion and stokes equations, and the 2D lock-exchange problem. These numerical schemes are then extended for non-hydrostatic, free-surface, variable-density regional ocean dynamics. The time-splitting procedure using projection methods is derived for non-hydrostatic or hydrostatic, and nonlinear free-surface or rigid-lid, versions of the model. We also derive consistent HDG stability parameters for the free-surface and non-hydrostatic pressure-corrector equations to ensure stability and accuracy. New boundary conditions for the free-surface-corrector and pressure-corrector are also introduced. We prove that these conditions lead to consistent boundary conditions for the free-surface and pressure proper. To ensure discrete mass conservation with a moving free-surface, we use an arbitrary Lagrangian- Eulerian (ALE) moving mesh algorithm. These schemes are again verified, this time using a tidal flow problem with analytical solutions and a 3D lock-exchange benchmark. We apply our new numerical schemes to evaluate the numerical requirements of the coupled biological-physical dynamics. We find that higher-order schemes are more accurate at the same efficiency compared to lower-order (e.g. second-order) accurate schemes when modeling a biological patch. Due to decreased numerical dissipation, the higher-order schemes are capable of modeling biological patchiness over a sustained duration, while the lower-order schemes can lose significant biomass after a few non-dimensional times and can thus solve erroneous nonlinear dynamics. Finally, inspired by Stellwagen Bank in Massachusetts Bay, we study the effect of non-hydrostatic physics on biological productivity and phytoplankton fields for tidally-driven flows over an idealized bank. We find that the non-hydrostatic pressure and flows are important for biological dynamics, especially when flows are supercritical. That is, when the slope of the topography is larger than the slope of internal wave rays at the tidal frequency. The non-hydrostatic effects increase with increasing nonlinearity, both when the internal Froude number and criticality parameter increase. Even in cases where the instantaneous biological productivity is not largely modified, we find that the total biomass, spatial variability and patchiness of phytoplankton can be significantly altered by non-hydrostatic processes. Our ultimate dynamics motivation is to allow quantitative simulation studies of fundamental nonlinear biological-physical dynamics in coastal regions with complex bathymetric features such as straits, sills, ridges and shelfbreaks. This thesis develops the necessary numerical schemes that meet the stringent accuracy requirements for these types of flows and dynamics.

Modeling Flow Encountering Abrupt Topography Using Hybridizable Discontinuous Galerkin Projection Methods

Modeling Flow Encountering Abrupt Topography Using Hybridizable Discontinuous Galerkin Projection Methods PDF Author: Johnathan Hiep Vo
Publisher:
ISBN:
Category :
Languages : en
Pages : 89

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Book Description
In this work novel high-order hybridizable discontinuous Galerkin (HDG) projection methods are further developed for ocean dynamics and geophysical fluid predictions. We investigate the effects of the HDG stabilization parameter for both the momentum equation as well as tracer diffusion. We also make a correction to our singularity treatment algorithm for nailing down a numerically consistent and unique solution to the pressure Poisson equation with homogeneous Neumann boundary conditions everywhere along the boundary. Extensive numerical results using physically realistic ocean flows are presented to verify the HDG projection methods, including the formation of internal wave beams over a shallow but abrupt seamount, the generation of internal solitary waves from stratified oscillatory flow over steep topography, and the circulation of bottom gravity currents down a slope. Additionally, we investigate the implementation of open boundary conditions for finite element methods and present results in the context of our ocean simulations. Through this work we present the hybridizable discontinuous Galerkin projection methods as a viable and competitive alternative for large-scale, realistic ocean modeling.

Hp Discontinuous Galerkin (DG) Methods for Coastal Ocean Circulation and Transport

Hp Discontinuous Galerkin (DG) Methods for Coastal Ocean Circulation and Transport PDF Author: Colton J. Conroy
Publisher:
ISBN:
Category :
Languages : en
Pages : 246

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Book Description
In this dissertation, we present the development and implementation of a high-order, discontinuous Galerkin (DG), three-dimensional coastal ocean circulation and transport model. The model solves the three-dimensional shallow water equations (SWE) using a DG spatial discretization coupled with explicit Runge-Kutta (RK) time stepping. All the primary variables, including the free surface elevation, are discretized via discontinuous polynomial spaces of arbitrary order. The difficulty of mismatched lateral boundaries that accompanies a discontinuous free surface is overcome through the use of a novel, well-balanced, sigma coordinate system in the vertical, which transforms the bottom boundary and free surface into coordinate surfaces. Novel techniques incorporated by the new model include: a high-order coupling method that evaluates the discrete depth-integrated velocity exactly, the use of a compact convolution kernel made-up of B-splines that filters out errors in the DG discretization and enhances the accuracy and convergence properties of the numerical solution, as well as a so-called modified basis method, which calculates the vertical velocity and the baroclinic pressure force in a high order fashion. Model verification is presented for a number of three-dimensional analytic test cases including flow and transport problems, displaying up to fourth-order convergence for smooth solutions.

Development of a Non-hydrostatic Coastal Ocean Model Using the Discontinuous Galerkin Method

Development of a Non-hydrostatic Coastal Ocean Model Using the Discontinuous Galerkin Method PDF Author: Wei Pan
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description


Ocean Modeling in an Eddying Regime

Ocean Modeling in an Eddying Regime PDF Author: Matthew W. Hecht
Publisher: John Wiley & Sons
ISBN: 1118671996
Category : Science
Languages : en
Pages : 654

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Book Description
Published by the American Geophysical Union as part of the Geophysical Monograph Series, Volume 177. This monograph is the first to survey progress in realistic simulation in a strongly eddying regime made possible by recent increases in computational capability. Its contributors comprise the leading researchers in this important and constantly evolving field. Divided into three parts Oceanographic Processes and Regimes: Fundamental Questions Ocean Dynamics and State: From Regional to Global Scale, and Modeling at the Mesoscale: State of the Art and Future Directions The volume details important advances in physical oceanography based on eddy resolving ocean modeling. It captures the state of the art and discusses issues that ocean modelers must consider in order to effectively contribute to advancing current knowledge, from subtleties of the underlying fluid dynamical equations to meaningful comparison with oceanographic observations and leading-edge model development. It summarizes many of the important results which have emerged from ocean modeling in an eddying regime, for those interested broadly in the physical science. More technical topics are intended to address the concerns of those actively working in the field.

Towards Next Generation Ocean Models

Towards Next Generation Ocean Models PDF Author: Mattheus Percy Ueckermann
Publisher:
ISBN:
Category :
Languages : en
Pages : 170

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Book Description
(cont.) Finally, numerous solver-preconditioner combinations are benchmarked to identify an efficient solution method for inverting matrices, which is necessary for implicit time integration schemes. From our quantitative incubation of numerical schemes, a number of recommendations on the tools necessary to solve dynamical equations for multiscale ocean predictions are provided.

Numerical Ocean Circulation Modeling

Numerical Ocean Circulation Modeling PDF Author: Aike Beckmann
Publisher: World Scientific
ISBN: 1848168241
Category : Science
Languages : en
Pages : 342

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Book Description
This book offers a comprehensive overview of the models and methods employed in the rapidly advancing field of numerical ocean circulation modeling. For those new to the field, concise reviews of the equations of oceanic motion, sub-grid-scale parameterization, and numerical approximation techniques are presented and four specific numerical models, chosen to span the range of current practice, are described in detail. For more advanced users, a suite of model test problems is developed to illustrate the differences among models, and to serve as a first stage in the quantitative evaluation of future algorithms. The extensive list of references makes this book a valuable text for both graduate students and postdoctoral researchers in the marine sciences and in related fields such as meteorology, and climate and coupled biogeochemical modeling.

Advanced Ocean Modelling

Advanced Ocean Modelling PDF Author: Jochen Kämpf
Publisher: Springer Science & Business Media
ISBN: 3642106102
Category : Science
Languages : en
Pages : 190

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Book Description
This book focuses on motions of incompressible ?uids of a freely moving surface being in?uenced by both the Earth’s rotation and density strati?cation. In contrast to traditional textbooks in the ?eld of geophysical ?uid dynamics, such as those by by Cushman-Roisin (1994) and Gill (1982), this book uses the method of proce- oriented hydrodynamic modelling to illustrate a rich variety of ?uid phenomena. To this end, the reader can adopt the model codes, found on the Springer server accompanying this book, to reproduce most graphs of this book and, even better, to create animation movies. The reader can also employ the codes as templates for own independent studies. This can be done by a lay person as a hobby activity, undergraduate or postgraduate students as part of their education, or professional scientists as part of research. Exercises of this book are run with open-source software that can be freely downloaded from the Internet. This includes the FORTRAN 95 compiler “G95” used for execution of model simulations, the data visualisation program “SciLab”, and “ImageMagick” for the creation of graphs and GIF animations, which can be watched with most Internet browsers.

Elements of Continuum Mechanics and Conservation Laws

Elements of Continuum Mechanics and Conservation Laws PDF Author: S.K. Godunov
Publisher: Springer Science & Business Media
ISBN: 1475751176
Category : Computers
Languages : en
Pages : 263

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Book Description
Elements of Continuum Mechanics and Conservation Laws presents a systematization of different models in mathematical physics, a study of the structure of conservation laws, thermodynamical identities, and connection with criteria for well-posedness of the corresponding mathematical problems. The theory presented in this book stems from research carried out by the authors concerning the formulations of differential equations describing explosive deformations of metals. In such processes, elasticity equations are used in some zones, whereas hydrodynamics equations are stated in other zones. Plastic deformations appear in transition zones, which leads to residual stresses. The suggested model contains some relaxation terms which simulate these plastic deformations. Certain laws of thermodynamics are used in order to describe and study differential equations simulating the physical processes. This leads to the special formulation of differential equations using generalized thermodynamical potentials.

Runge-Kutta Discontinuous Galerkin Methods for Convection-dominated Problems

Runge-Kutta Discontinuous Galerkin Methods for Convection-dominated Problems PDF Author: Bernardo Cockburn
Publisher:
ISBN:
Category :
Languages : en
Pages : 84

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Book Description