Genetics and Genomics of Setaria

Genetics and Genomics of Setaria PDF Author: Andrew Doust
Publisher: Springer
ISBN: 3319451057
Category : Science
Languages : en
Pages : 375

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Book Description
Setaria viridis and S.italica make up a model grass system to investigate C4 photosynthesis, cell wall biosynthesis, responses to drought, herbicide, and other environmental stressors, genome dynamics, developmental genetics and morphology, and interactions with microorganisms. Setaria viridis (green foxtail) is one of the world’s most widespread weeds, and its small size, native variation, rapidly burgeoning genetic and genomic resources, and transformability are making it the system of choice for both basic research and its translation into crop improvement. Its domesticated variant, S. italica (foxtail millet), is a drought-hardy cereal grown in China, India and Africa, and new breeding techniques show great potential for improving yields and nutrition for drought-prone regions. This book brings together for the first time evolutionary, genomic, genetic, and morphological analyses, together with protocols for growing and transforming Setaria, and approaches to high throughput genotyping and candidate gene analysis. Authors include major Setaria researchers from both the USA and overseas.

Genetics and Genomics of Setaria

Genetics and Genomics of Setaria PDF Author: Andrew Doust
Publisher: Springer
ISBN: 3319451057
Category : Science
Languages : en
Pages : 375

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Book Description
Setaria viridis and S.italica make up a model grass system to investigate C4 photosynthesis, cell wall biosynthesis, responses to drought, herbicide, and other environmental stressors, genome dynamics, developmental genetics and morphology, and interactions with microorganisms. Setaria viridis (green foxtail) is one of the world’s most widespread weeds, and its small size, native variation, rapidly burgeoning genetic and genomic resources, and transformability are making it the system of choice for both basic research and its translation into crop improvement. Its domesticated variant, S. italica (foxtail millet), is a drought-hardy cereal grown in China, India and Africa, and new breeding techniques show great potential for improving yields and nutrition for drought-prone regions. This book brings together for the first time evolutionary, genomic, genetic, and morphological analyses, together with protocols for growing and transforming Setaria, and approaches to high throughput genotyping and candidate gene analysis. Authors include major Setaria researchers from both the USA and overseas.

Millets and Sorghum

Millets and Sorghum PDF Author: Jagannath V. Patil
Publisher: John Wiley & Sons
ISBN: 1119123054
Category : Technology & Engineering
Languages : en
Pages : 334

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Book Description
Millets and sorghum are extremely important crops in many developing nations and because of the ability of many of them to thrive in low-moisture situations they represent some exciting opportunities for further development to address the continuing and increasing impact of global temperature increase on the sustainability of the world’s food crops. The main focus of this thorough new book is the potential for crop improvement through new and traditional methods, with the book’s main chapters covering the following crops: sorghum, pearl millet, finger millet, foxtail milet, proso millet, little millet, barnyard millet, kodo millet, tef and fonio. Further chapters cover pests and diseases, nutritional and industrial importance, novel tools for improvement, and seed systems in millets. Millets and Sorghum provides full and comprehensive coverage of these crucially important crops, their biology, world status and potential for improvement, and is an essential purchase for crop and plant scientists, and food scientists and technologists throughout the developed and developing world. All libraries in universities and research establishment where biological and agricultural sciences are studied and taught should have copies of this important book on their shelves.

Setaria as a Model Genetic System to Accelerate Yield Increases in Cereals, Forage Crops, and Bioenergy Grasses

Setaria as a Model Genetic System to Accelerate Yield Increases in Cereals, Forage Crops, and Bioenergy Grasses PDF Author: Thomas P. Brutnell
Publisher: Frontiers Media SA
ISBN: 2889632822
Category :
Languages : en
Pages : 141

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Book Description


Genomic Designing for Abiotic Stress Resistant Cereal Crops

Genomic Designing for Abiotic Stress Resistant Cereal Crops PDF Author: Chittaranjan Kole
Publisher: Springer Nature
ISBN: 3030758753
Category : Science
Languages : en
Pages : 332

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Book Description
This book presents abiotic stresses that cause crop damage in the range of 6-20%. Understanding the interaction of crop plants to the abiotic stresses caused by heat, cold, drought, flooding, submergence, salinity, acidity, etc., is important to develop resistant crop varieties. Knowledge on the advanced genetic and genomic crop improvement strategies including molecular breeding, transgenics, genomic-assisted breeding, and the recently emerging genome editing for developing resistant varieties in cereal crops is imperative for addressing FPNEE (food, health, nutrition, energy, and environment) security. Whole genome sequencing of these crops followed by genotyping-by-sequencing has facilitated precise information about the genes conferring resistance useful for gene discovery, allele mining, and shuttle breeding which in turn opened up the scope for 'designing' crop genomes with resistance to abiotic stresses. The nine chapters each dedicated to a cereal crop in this volume are deliberate on different types of abiotic stresses and their effects on and interaction with crop plants; enumerate on the available genetic diversity with regard to abiotic stress resistance among available cultivars; illuminate on the potential gene pools for utilization in interspecific gene transfer; are brief on the classical genetics of stress resistance and traditional breeding for transferring them to their cultivated counterparts; elucidate on the success stories of genetic engineering for developing abiotic stress-resistant crop varieties; discuss on molecular mapping of genes and QTLs underlying stress resistance and their marker-assisted introgression into elite varieties; enunciate on different emerging genomics-aided techniques including genomic selection, allele mining, gene discovery, and gene pyramiding for developing adaptive crop varieties with higher quantity and quality, and also elaborate some case studies on genome editing focusing on specific genes for generating abiotic stress-resistant crops.

The Foxtail Millet Genome

The Foxtail Millet Genome PDF Author: Manoj Prasad
Publisher: Springer
ISBN: 3319656171
Category : Science
Languages : en
Pages : 159

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Book Description
This book presents up-to-date information on foxtail millet genomics, with a particular focus on its agronomic importance, genome architecture, marker development, evolutionary and diversity studies, comparative genomics and stress biology. The topics discussed have the potential to open up a new era of crop improvement in foxtail millet and other related grass species. Foxtail millet (Setaria italica L.) is the oldest domesticated crop in the world (domesticated >8700 years ago) and it has been extensively grown in the semi-arid regions of Asia, Europe and the Americas as a food and fodder crop ever since. Further, as a C4 crop with close genetic relatedness to several biofuel grasses, foxtail millet has been promoted as a model plant. In view of its importance, the US Department of Energy Joint Genome Institute and Beijing Genomics Institute have independently sequenced the genome of foxtail millet. The availability of the draft genome sequence has advanced the genomics and genetics of this important crop, resulting in the development of large-scale genome-wide molecular markers and demonstration of their utility in genomics-assisted breeding, as well as the identification of the molecular and biological roles of several stress-responsive gene families in connection with abiotic stress tolerance. In addition, several open access databases have been developed to make these resources for crop improvement through structural and functional genomics widely available.

Genetics and Genomics of Rice

Genetics and Genomics of Rice PDF Author: Qifa Zhang
Publisher: Springer Science & Business Media
ISBN: 1461479037
Category : Science
Languages : en
Pages : 406

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Book Description
This book provides a comprehensive coverage of the advances in genetics and genomics research on rice. The chapters feature the latest developments in rice research and cover such topics as the tools and resources for the functional analysis of rice genes, the identification of useful genes for rice improvement, the present understanding of rice development and biological processes, and the application of this present understanding towards rice improvement. The volume also features a perspective on synthesis and prospects, laying the groundwork for future advances in rice genetics and genomics. Written by authorities in the field, Genetics and Genomics of Rice will serve as an invaluable reference for rice researchers for years to come.

Genomic Designing for Biotic Stress Resistant Cereal Crops

Genomic Designing for Biotic Stress Resistant Cereal Crops PDF Author: Chittaranjan Kole
Publisher: Springer Nature
ISBN: 3030758796
Category : Science
Languages : en
Pages : 340

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Book Description
This book presents deliberations on molecular and genomic mechanisms underlying the interactions of crop plants to the biotic stresses caused by different diseases and pests that are important to develop resistant crop varieties. Knowledge on the advanced genetic and genomic crop improvement strategies including molecular breeding, transgenics, genomic-assisted breeding, and the recently emerging genome editing for developing resistant varieties in cereal crops is imperative for addressing FHNEE (food, health, nutrition, energy, and environment) security. Whole genome sequencing of these crops followed by genotyping-by-sequencing has provided precise information regarding the genes conferring resistance useful for gene discovery, allele mining, and shuttle breeding which in turn opened up the scope for 'designing' crop genomes with resistance to biotic stresses. The eight chapters each dedicated to a cereal crop in this volume elucidate on different types of biotic stresses and their effects on and interaction with the crop; enumerate on the available genetic diversity with regard to biotic stress resistance among available cultivars; illuminate on the potential gene pools for utilization in interspecific gene transfer; present brief on classical genetics of stress resistance and traditional breeding for transferring them to their cultivated counterparts; depict the success stories of genetic engineering for developing biotic stress-resistant crop varieties; discuss on molecular mapping of genes and QTLs underlying stress resistance and their marker-assisted introgression into elite varieties; enunciate on different genomics-aided techniques including genomic selection, allele mining, gene discovery, and gene pyramiding for developing adaptive crop varieties with higher quantity and quality of yields, and also elaborate some case studies on genome editing focusing on specific genes for generating biotic stress-resistant crops.

Transgenic Plants

Transgenic Plants PDF Author: Sandeep Kumar
Publisher: Humana Press
ISBN: 9781493987771
Category : Science
Languages : en
Pages : 444

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Book Description
This book provides thorough coverage of transgenic plants with methods on plant transformation, biotechnological application of transgenic plants, and future developments. Chapters are grouped into sections focusing on transformation model and crop plants, genome engineering, and transgenic event characterization. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Transgenic Plants: Methods and Protocols aims to broaden the utility for readers, provide additional references for further understanding, and present the technology’s potential for solving some of our most urgent global challenges in food security.

Gene Prediction

Gene Prediction PDF Author: Martin Kollmar
Publisher: Humana Press
ISBN: 9781493991723
Category : Science
Languages : en
Pages : 284

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Book Description
This volume introduces software used for gene prediction with focus on eukaryotic genomes. The chapters in this book describe software and web server usage as applied in common use-cases, and explain ways to simplify re-annotation of long available genome assemblies. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary computational requirements, step-by-step, readily reproducible computational protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and thorough, Gene Prediction: Methods and Protocols is a valuable resource for researchers and research groups working on the assembly and annotation of single species or small groups of species. Chapter 3 is available open access under a CC BY 4.0 license via link.springer.com.

Tomorrow's Table

Tomorrow's Table PDF Author: Pamela C. Ronald
Publisher: Oxford University Press
ISBN: 0199756694
Category : Science
Languages : en
Pages : 228

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Book Description
By the year 2050, Earth's population will double. If we continue with current farming practices, vast amounts of wilderness will be lost, millions of birds and billions of insects will die, and the public will lose billions of dollars as a consequence of environmental degradation. Clearly, there must be a better way to meet the need for increased food production. Written as part memoir, part instruction, and part contemplation, Tomorrow's Table argues that a judicious blend of two important strands of agriculture--genetic engineering and organic farming--is key to helping feed the world's growing population in an ecologically balanced manner. Pamela Ronald, a geneticist, and her husband, Raoul Adamchak, an organic farmer, take the reader inside their lives for roughly a year, allowing us to look over their shoulders so that we can see what geneticists and organic farmers actually do. The reader sees the problems that farmers face, trying to provide larger yields without resorting to expensive or environmentally hazardous chemicals, a problem that will loom larger and larger as the century progresses. They learn how organic farmers and geneticists address these problems. This book is for consumers, farmers, and policy decision makers who want to make food choices and policy that will support ecologically responsible farming practices. It is also for anyone who wants accurate information about organic farming, genetic engineering, and their potential impacts on human health and the environment.