Computational studies of RNA and DNA

Computational studies of RNA and DNA PDF Author: Jirí Šponer
Publisher: Springer Science & Business Media
ISBN: 1402048513
Category : Science
Languages : en
Pages : 638

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Book Description
This book integrates modern computational studies of nucleic acids, ranging from advanced electronic structure quantum chemical calculations through explicit solvent molecular dynamics (MD) simulations up to mesoscopic modelling, with the main focus given to the MD field. It gives an equal emphasis to the leading methods and applications while successes as well as pitfalls of the computational techniques are discussed.

Computational studies of RNA and DNA

Computational studies of RNA and DNA PDF Author: Jirí Šponer
Publisher: Springer Science & Business Media
ISBN: 1402048513
Category : Science
Languages : en
Pages : 638

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Book Description
This book integrates modern computational studies of nucleic acids, ranging from advanced electronic structure quantum chemical calculations through explicit solvent molecular dynamics (MD) simulations up to mesoscopic modelling, with the main focus given to the MD field. It gives an equal emphasis to the leading methods and applications while successes as well as pitfalls of the computational techniques are discussed.

Computational Methods for Understanding Riboswitches

Computational Methods for Understanding Riboswitches PDF Author:
Publisher: Academic Press
ISBN: 0128016183
Category : Science
Languages : en
Pages : 449

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Book Description
This new volume of Methods in Enzymology continues the legacy of this premier serial with quality chapters authored by leaders in the field. This volume covers computational prediction RNA structure and dynamics, including such topics as computational modeling of RNA secondary and tertiary structures, riboswitch dynamics, and ion-RNA, ligand-RNA and DNA-RNA interactions. - Continues the legacy of this premier serial with quality chapters authored by leaders in the field - Covers computational methods and applications in RNA structure and dynamics - Contains chapters with emerging topics such as RNA structure prediction, riboswitch dynamics and thermodynamics, and effects of ions and ligands.

Conformational Aspects of DNA and RNA Oligonucleotides

Conformational Aspects of DNA and RNA Oligonucleotides PDF Author: Jacqueline Elisabeth van den Boogaart
Publisher:
ISBN:
Category :
Languages : en
Pages : 161

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Book Description


DNA- and RNA-Based Computing Systems

DNA- and RNA-Based Computing Systems PDF Author: Evgeny Katz
Publisher: John Wiley & Sons
ISBN: 3527825401
Category : Science
Languages : en
Pages : 408

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Book Description
Discover the science of biocomputing with this comprehensive and forward-looking new resource DNA- and RNA-Based Computing Systems delivers an authoritative overview of DNA- and RNA-based biocomputing systems that touches on cutting-edge advancements in computer science, biotechnology, nanotechnology, and materials science. Accomplished researcher, academic, and author Evgeny Katz offers readers an examination of the intersection of computational, chemical, materials, and engineering aspects of biomolecular information processing. A perfect companion to the recently published Enzyme-Based Computing by the same editor, the book is an authoritative reference for those who hope to better understand DNA- and RNA-based logic gates, multi-component logic networks, combinatorial calculators, and related computational systems that have recently been developed for use in biocomputing devices. DNA- and RNA-Based Computing Systems summarizes the latest research efforts in this rapidly evolving field and points to possible future research foci. Along with an examination of potential applications in biosensing and bioactuation, particularly in the field of biomedicine, the book also includes topics like: A thorough introduction to the fields of DNA and RNA computing, including DNA/enzyme circuits A description of DNA logic gates, switches and circuits, and how to program them An introduction to photonic logic using DNA and RNA The development and applications of DNA computing for use in databases and robotics Perfect for biochemists, biotechnologists, materials scientists, and bioengineers, DNA- and RNA-Based Computing Systems also belongs on the bookshelves of computer technologists and electrical engineers who seek to improve their understanding of biomolecular information processing. Senior undergraduate students and graduate students in biochemistry, materials science, and computer science will also benefit from this book.

Computational Studies on DNA Structures

Computational Studies on DNA Structures PDF Author: Yocheved Baime
Publisher:
ISBN:
Category : DNA.
Languages : en
Pages : 158

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Book Description


Computational Molecular Biology

Computational Molecular Biology PDF Author: Arthur M. Lesk
Publisher: Oxford University Press, USA
ISBN:
Category : Language Arts & Disciplines
Languages : en
Pages : 282

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Book Description
An overview of the field of computing with protein and nucleic acid sequences, aimed at investigators determining sequences, those who analyze them to identify unknown proteins and interpret their function, and those interested in the three-dimensional structures of biological molecules.

Algorithms in Computational Molecular Biology

Algorithms in Computational Molecular Biology PDF Author: Mourad Elloumi
Publisher: John Wiley & Sons
ISBN: 1118101987
Category : Science
Languages : en
Pages : 1027

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Book Description
This book represents the most comprehensive and up-to-date collection of information on the topic of computational molecular biology. Bringing the most recent research into the forefront of discussion, Algorithms in Computational Molecular Biology studies the most important and useful algorithms currently being used in the field, and provides related problems. It also succeeds where other titles have failed, in offering a wide range of information from the introductory fundamentals right up to the latest, most advanced levels of study.

Biological Sequence Analysis

Biological Sequence Analysis PDF Author: Richard Durbin
Publisher: Cambridge University Press
ISBN: 113945739X
Category : Science
Languages : en
Pages : 372

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Book Description
Probabilistic models are becoming increasingly important in analysing the huge amount of data being produced by large-scale DNA-sequencing efforts such as the Human Genome Project. For example, hidden Markov models are used for analysing biological sequences, linguistic-grammar-based probabilistic models for identifying RNA secondary structure, and probabilistic evolutionary models for inferring phylogenies of sequences from different organisms. This book gives a unified, up-to-date and self-contained account, with a Bayesian slant, of such methods, and more generally to probabilistic methods of sequence analysis. Written by an interdisciplinary team of authors, it aims to be accessible to molecular biologists, computer scientists, and mathematicians with no formal knowledge of the other fields, and at the same time present the state-of-the-art in this new and highly important field.

Computational Genome Analysis

Computational Genome Analysis PDF Author: Richard C. Deonier
Publisher: Springer Science & Business Media
ISBN: 0387288074
Category : Computers
Languages : en
Pages : 542

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Book Description
This book presents the foundations of key problems in computational molecular biology and bioinformatics. It focuses on computational and statistical principles applied to genomes, and introduces the mathematics and statistics that are crucial for understanding these applications. The book features a free download of the R software statistics package and the text provides great crossover material that is interesting and accessible to students in biology, mathematics, statistics and computer science. More than 100 illustrations and diagrams reinforce concepts and present key results from the primary literature. Exercises are given at the end of chapters.

Radiation Induced Molecular Phenomena in Nucleic Acids

Radiation Induced Molecular Phenomena in Nucleic Acids PDF Author: Manoj Shukla
Publisher: Springer Science & Business Media
ISBN: 1402081847
Category : Science
Languages : en
Pages : 677

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Book Description
Comprehensive theoretical and experimental analysis of UV-radiation and low energy electron induced phenomena in nucleic acid bases (NABs) and base assemblies are presented in this book. NABs are highly photostable; the absorbed energy is dissipated in the form of ultrafast nonradiative decay. This book highlights the possible mechanisms of these phenomena which is important for all living species and discusses technical challenges in exploration of these processes.