Characterizing the Potential Hemophore and Iron Storage Proteins from Mycobacterium Tuberculosis

Characterizing the Potential Hemophore and Iron Storage Proteins from Mycobacterium Tuberculosis PDF Author: Lisa Marie McMath
Publisher:
ISBN: 9781267089571
Category :
Languages : en
Pages : 137

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Book Description
Tuberculosis is the deadly disease caused by Mycobacterium tuberculosis (Mtb). Like most pathogens, iron metabolism is critical for survival. Because of the poor solubility of iron in physiological conditions, bacteria have evolved elaborate iron acquisition systems to steal the essential metal from the host. Ferritins evolved to store iron and keep it bioavailable. The Mtb genome encodes for two ferritin homologs: a heme-containing bacterioferritin (BfrA) and a non-heme ferritin (BfrB). Both are structurally conserved and share nearly identical architectures. The main structural difference is that bacterioferritins contain a heme in a pocket created by the interface between two subunits of a dimer related by a non-crystallographic twofold axis. Both Mtb BfrA and Mtb BfrB were crystallized and solved by X-ray crystallography, and the typical ferritin fold was observed for each. Additionally, analysis of the Mtb BfrB crystal structure combined with sequence alignments with other structurally characterized bacterial ferritins revealed the presence of an unstructured 17-residue C-terminal extension. By protein pull-down experiments, we showed that BfrB interacts with a newly described protein nanocompartment, encapsulin, and we have shown that this extension is the BfrB anchor peptide for the interaction. However, BfrA has no such extension and does not exhibit an interaction with encapsulin. Hence, in an effort to gain a better understanding of Mtb iron metabolism, we report the structural and functional characterization of the Mtb BfrA and BfrB assemblies, as well as a description of a novel association with encapsulin. Additionally, we have shown that Mtb has a novel heme uptake system, and have identified the genomic region responsible. Found encoded within this genomic region is a secreted protein that binds heme tightly, which we propose to be a hemophore, and its crystal structure without heme bound has been solved. This protein transfers heme to two predicted transmembrane heme transporters, MmpL11 and MmpL3. We also observed that non-pathogenic Mycobacterium bovis BCG (BCG) has an attenuated system in comparison with Mtb. By sequence alignment, the homologous BCG hemophore is identical to the Mtb hemophore, except for lysine 87 substituted with threonine, and this substitution may contribute to the attenuation seen in the BCG system. In an effort to define the heme binding site and consequences of the K87T mutation, attempts were made to crystallize both proteins with and without heme bound.

Characterizing the Potential Hemophore and Iron Storage Proteins from Mycobacterium Tuberculosis

Characterizing the Potential Hemophore and Iron Storage Proteins from Mycobacterium Tuberculosis PDF Author: Lisa Marie McMath
Publisher:
ISBN: 9781267089571
Category :
Languages : en
Pages : 137

Get Book Here

Book Description
Tuberculosis is the deadly disease caused by Mycobacterium tuberculosis (Mtb). Like most pathogens, iron metabolism is critical for survival. Because of the poor solubility of iron in physiological conditions, bacteria have evolved elaborate iron acquisition systems to steal the essential metal from the host. Ferritins evolved to store iron and keep it bioavailable. The Mtb genome encodes for two ferritin homologs: a heme-containing bacterioferritin (BfrA) and a non-heme ferritin (BfrB). Both are structurally conserved and share nearly identical architectures. The main structural difference is that bacterioferritins contain a heme in a pocket created by the interface between two subunits of a dimer related by a non-crystallographic twofold axis. Both Mtb BfrA and Mtb BfrB were crystallized and solved by X-ray crystallography, and the typical ferritin fold was observed for each. Additionally, analysis of the Mtb BfrB crystal structure combined with sequence alignments with other structurally characterized bacterial ferritins revealed the presence of an unstructured 17-residue C-terminal extension. By protein pull-down experiments, we showed that BfrB interacts with a newly described protein nanocompartment, encapsulin, and we have shown that this extension is the BfrB anchor peptide for the interaction. However, BfrA has no such extension and does not exhibit an interaction with encapsulin. Hence, in an effort to gain a better understanding of Mtb iron metabolism, we report the structural and functional characterization of the Mtb BfrA and BfrB assemblies, as well as a description of a novel association with encapsulin. Additionally, we have shown that Mtb has a novel heme uptake system, and have identified the genomic region responsible. Found encoded within this genomic region is a secreted protein that binds heme tightly, which we propose to be a hemophore, and its crystal structure without heme bound has been solved. This protein transfers heme to two predicted transmembrane heme transporters, MmpL11 and MmpL3. We also observed that non-pathogenic Mycobacterium bovis BCG (BCG) has an attenuated system in comparison with Mtb. By sequence alignment, the homologous BCG hemophore is identical to the Mtb hemophore, except for lysine 87 substituted with threonine, and this substitution may contribute to the attenuation seen in the BCG system. In an effort to define the heme binding site and consequences of the K87T mutation, attempts were made to crystallize both proteins with and without heme bound.

Iron Acquisition by the Genus Mycobacterium

Iron Acquisition by the Genus Mycobacterium PDF Author: B. Rowe Byers
Publisher: Springer Science & Business Media
ISBN: 3319003038
Category : Science
Languages : en
Pages : 96

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Book Description
Iron Acquisition by the Genus Mycobacterium summarizes the early evidence for the necessity of iron in mycobacteria and the discovery of the mycobacterial siderophores mycobactin, carboxymycobactin, and exochelin. The structural characterization of the mycobacterial siderophores is described. The genes so far identified as essential for iron acquisition and maintenance of an infection by pathogenic mycobacteria are discussed. The potential role of siderocalin in iron gathering by M. tuberculosis is featured. Because new drugs for M. tuberculosis are needed, this brief also emphasizes the design of antibiotics that interfere with siderophore biosynthesis and the use of siderophore analogs and/or conjugates.

Molecular Genetics of Mycobacteria

Molecular Genetics of Mycobacteria PDF Author: Graham F. Hatfull
Publisher: John Wiley & Sons
ISBN: 1555818846
Category : Science
Languages : en
Pages : 832

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Book Description
A comprehensive collection of perspectives by experts in mycobacterial molecular biology Mycobacterium tuberculosis causes one in four avoidable deaths in the developing world and kills more adults than malaria, AIDS, and all tropical diseases combined. Tuberculosis was named a global health emergency by the World Health Organization, a distinction no other disease has received. Although the study of mycobacterial genetics has expanded dramatically, with new investigations into mycobacterial growth, replication, metabolism, physiology, drug susceptibility, and virulence, most of the problems in tuberculosis control that existed in 2000 remain today. Advances in our understanding of mycobacterial genetics have been reflected in exciting recent developments. New diagnostic approaches can identify drug resistance within a few hours, promising new drugs are progressing through the pipeline and into the clinic, and a range of newly developed vaccines are being evaluated. It is an exciting time as the fruits of 30 years of intensive genetic investigation are finally beginning to emerge. Written by leading experts in the field, Molecular Genetics of Mycobacteria, Second Edition, Discusses key areas of current research in mycobacterial genetics Explains the genetics of the physiology, metabolism, and drug sensitivities of M. tuberculosis Presents genetic approaches for manipulating M. tuberculosis This book is an invaluable resource for anyone interested in the molecular genetics and molecular biology of mycobacteria.

Metallomics and the Cell

Metallomics and the Cell PDF Author: Lucia Banci
Publisher: Springer Science & Business Media
ISBN: 9400755619
Category : Science
Languages : en
Pages : 642

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Book Description
Metallomics and the Cell provides in an authoritative and timely manner in 16 stimulating chapters, written by 37 internationally recognized experts from 9 nations, and supported by more than 3000 references, several tables, and 110 illustrations, mostly in color, a most up-to-date view of the "metallomes" which, as defined in the "omics" world, describe the entire set of biomolecules that interact with or are affected by each metal ion. The most relevant tools for visualizing metal ions in the cell and the most suitable bioinformatic tools for browsing genomes to identify metal-binding proteins are also presented. Thus, MILS-12 is of relevance for structural and systems biology, inorganic biological chemistry, genetics, medicine, diagnostics, as well as teaching, etc.

Bacterial Physiology

Bacterial Physiology PDF Author: Walid El-Sharoud
Publisher: Springer Science & Business Media
ISBN: 3540749217
Category : Science
Languages : en
Pages : 377

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Book Description
The application of new molecular methodologies in the study of bacterial behavior and cell architecture has enabled new revolutionary insights and discoveries in these areas. This new text presents recent developments in bacterial physiology that are highly relevant to a wide range of readership including those interested in basic and applied knowledge. Its chapters are written by international scientific authorities at the forefront of the subject. The value of this recent knowledge in bacterial physiology is not only restricted to fundamental biology. It also extends to biotechnology and drug-discovery disciplines.

Data for Biochemical Research

Data for Biochemical Research PDF Author:
Publisher:
ISBN:
Category : Biochemistry
Languages : en
Pages : 0

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Book Description


The Fungal Kingdom

The Fungal Kingdom PDF Author: Joseph Heitman
Publisher: John Wiley & Sons
ISBN: 1555819583
Category : Medical
Languages : en
Pages : 1136

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Book Description
Fungi research and knowledge grew rapidly following recent advances in genetics and genomics. This book synthesizes new knowledge with existing information to stimulate new scientific questions and propel fungal scientists on to the next stages of research. This book is a comprehensive guide on fungi, environmental sensing, genetics, genomics, interactions with microbes, plants, insects, and humans, technological applications, and natural product development.

Bacterial Pathogens and Their Virulence Factors

Bacterial Pathogens and Their Virulence Factors PDF Author: Douglas I. Johnson
Publisher: Springer
ISBN: 3319676512
Category : Medical
Languages : en
Pages : 451

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Book Description
Bacterial Pathogens and their Virulence Factors contains a detailed description of 32 major bacterial pathogens that affect human health and their associated virulence determinants. Chapter 1 gives an overview of the different types and classes of general virulence factors involved in host cell adherence and invasion, dissemination within the host, host cell damage, and evasion of host defense systems, as well as mechanisms by which these virulence factors are regulated. Chapters 2 through 33 give concise descriptions of the disease states associated with the 32 bacterial genera and their major pathogenic species, along with an in-depth description of the individual virulence factors that have been found to be functionally involved in pathogenicity. A detailed bibliography derived from primary literature and review articles accompanies each of these chapters, allowing the reader to delve more deeply into individual pathogens and their virulence determinants. Chapter 34 discusses the exciting possibilities and initial successes of using detailed information on a pathogen’s virulence toolkit to design new therapeutics aimed at specific virulence traits.

Microorganisms in Environmental Management

Microorganisms in Environmental Management PDF Author: T. Satyanarayana
Publisher: Springer Science & Business Media
ISBN: 940072229X
Category : Science
Languages : en
Pages : 827

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Book Description
Microbes and their biosynthetic capabilities have been invaluable in finding solutions for several intractable problems mankind has encountered in maintaining the quality of the environment. They have, for example, been used to positive effect in human and animal health, genetic engineering, environmental protection, and municipal and industrial waste treatment. Microorganisms have enabled feasible and cost-effective responses which would have been impossible via straightforward chemical or physical engineering methods. Microbial technologies have of late been applied to a range of environmental problems, with considerable success. This survey of recent scientific progress in usefully applying microbes to both environmental management and biotechnology is informed by acknowledgement of the polluting effects on the world around us of soil erosion, the unwanted migration of sediments, chemical fertilizers and pesticides, and the improper treatment of human and animal wastes. These harmful phenomena have resulted in serious environmental and social problems around the world, problems which require us to look for solutions elsewhere than in established physical and chemical technologies. Often the answer lies in hybrid applications in which microbial methods are combined with physical and chemical ones. When we remember that these highly effective microorganisms, cultured for a variety of applications, are but a tiny fraction of those to be found in the world around us, we realize the vastness of the untapped and beneficial potential of microorganisms. At present, comprehending the diversity of hitherto uncultured microbes involves the application of metagenomics, with several novel microbial species having been discovered using culture-independent approaches. Edited by recognized leaders in the field, this penetrating assessment of our progress to date in deploying microorganisms to the advantage of environmental management and biotechnology will be widely welcomed.

Sustainable Agriculture Reviews 49

Sustainable Agriculture Reviews 49 PDF Author: Harsh Panwar
Publisher: Springer Nature
ISBN: 3030582590
Category : Medical
Languages : en
Pages : 446

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Book Description
This book presents advanced therapies based on new and complementary drugs, and alternative techniques and strategies, such as phages, probiotics, flavonoids, essential oils, cellulose, peptides, nano delivery, iron starvation and vaccines.