An Introduction to Statistical Genetic Data Analysis

An Introduction to Statistical Genetic Data Analysis PDF Author: Melinda C. Mills
Publisher: MIT Press
ISBN: 0262357445
Category : Science
Languages : en
Pages : 433

Get Book Here

Book Description
A comprehensive introduction to modern applied statistical genetic data analysis, accessible to those without a background in molecular biology or genetics. Human genetic research is now relevant beyond biology, epidemiology, and the medical sciences, with applications in such fields as psychology, psychiatry, statistics, demography, sociology, and economics. With advances in computing power, the availability of data, and new techniques, it is now possible to integrate large-scale molecular genetic information into research across a broad range of topics. This book offers the first comprehensive introduction to modern applied statistical genetic data analysis that covers theory, data preparation, and analysis of molecular genetic data, with hands-on computer exercises. It is accessible to students and researchers in any empirically oriented medical, biological, or social science discipline; a background in molecular biology or genetics is not required. The book first provides foundations for statistical genetic data analysis, including a survey of fundamental concepts, primers on statistics and human evolution, and an introduction to polygenic scores. It then covers the practicalities of working with genetic data, discussing such topics as analytical challenges and data management. Finally, the book presents applications and advanced topics, including polygenic score and gene-environment interaction applications, Mendelian Randomization and instrumental variables, and ethical issues. The software and data used in the book are freely available and can be found on the book's website.

An Introduction to Genetic Statistics

An Introduction to Genetic Statistics PDF Author: Oscar Kempthorne
Publisher: Wiley-Blackwell
ISBN:
Category : Science
Languages : en
Pages : 574

Get Book Here

Book Description
Elementary probability; Random mating populations; Elementary selection problems; The elementary stochastic theory of genetic populations; Inbreeding; The generation matrix theory of inbreeding; Tests of genetic hypotheses; The estimation of genetic parameters; The planning of experiments; Statistical problems in human genetics; The analysis of variation; The partition of variance; Multiple regression, correlation and adjustment of data, and path analysis; Inheritance of quantitative characters in a random mating population; Non-random mating deploid populations with one locus segregating; Correlation between relatives under inbreeding with one locus segregating; One-locus polyploid populations; Diploid populations with arbitrary number of segregating loci and arbitrary epistacy; Inbreeding with a arbitrary diploid population; Population derived from inbred lines; Infinitesimal equilibrium theory of assortative mating; Selection for quantitative characters.

An Introduction to Genetic Epidemiology

An Introduction to Genetic Epidemiology PDF Author: Palmer, Lyle J.
Publisher: Policy Press
ISBN: 1861348975
Category : Medical
Languages : en
Pages : 240

Get Book Here

Book Description
This book brings together leading experts to provide an introduction to genetic epidemiology that begins with a primer in human molecular genetics through all the standard methods in population genetics and genetic epidemiology required for an adequate grounding in the field.

Handbook of Statistical Genetics

Handbook of Statistical Genetics PDF Author: David J. Balding
Publisher: John Wiley & Sons
ISBN: 9780470997628
Category : Science
Languages : en
Pages : 1616

Get Book Here

Book Description
The Handbook for Statistical Genetics is widely regarded as the reference work in the field. However, the field has developed considerably over the past three years. In particular the modeling of genetic networks has advanced considerably via the evolution of microarray analysis. As a consequence the 3rd edition of the handbook contains a much expanded section on Network Modeling, including 5 new chapters covering metabolic networks, graphical modeling and inference and simulation of pedigrees and genealogies. Other chapters new to the 3rd edition include Human Population Genetics, Genome-wide Association Studies, Family-based Association Studies, Pharmacogenetics, Epigenetics, Ethic and Insurance. As with the second Edition, the Handbook includes a glossary of terms, acronyms and abbreviations, and features extensive cross-referencing between the chapters, tying the different areas together. With heavy use of up-to-date examples, real-life case studies and references to web-based resources, this continues to be must-have reference in a vital area of research. Edited by the leading international authorities in the field. David Balding - Department of Epidemiology & Public Health, Imperial College An advisor for our Probability & Statistics series, Professor Balding is also a previous Wiley author, having written Weight-of-Evidence for Forensic DNA Profiles, as well as having edited the two previous editions of HSG. With over 20 years teaching experience, he’s also had dozens of articles published in numerous international journals. Martin Bishop – Head of the Bioinformatics Division at the HGMP Resource Centre As well as the first two editions of HSG, Dr Bishop has edited a number of introductory books on the application of informatics to molecular biology and genetics. He is the Associate Editor of the journal Bioinformatics and Managing Editor of Briefings in Bioinformatics. Chris Cannings – Division of Genomic Medicine, University of Sheffield With over 40 years teaching in the area, Professor Cannings has published over 100 papers and is on the editorial board of many related journals. Co-editor of the two previous editions of HSG, he also authored a book on this topic.

Applied Statistical Genetics with R

Applied Statistical Genetics with R PDF Author: Andrea S. Foulkes
Publisher: Springer Science & Business Media
ISBN: 038789554X
Category : Science
Languages : en
Pages : 264

Get Book Here

Book Description
Statistical genetics has become a core course in many graduate programs in public health and medicine. This book presents fundamental concepts and principles in this emerging field at a level that is accessible to students and researchers with a first course in biostatistics. Extensive examples are provided using publicly available data and the open source, statistical computing environment, R.

Handbook of Statistical Genomics

Handbook of Statistical Genomics PDF Author: David J. Balding
Publisher: John Wiley & Sons
ISBN: 1119429250
Category : Science
Languages : en
Pages : 1740

Get Book Here

Book Description
A timely update of a highly popular handbook on statistical genomics This new, two-volume edition of a classic text provides a thorough introduction to statistical genomics, a vital resource for advanced graduate students, early-career researchers and new entrants to the field. It introduces new and updated information on developments that have occurred since the 3rd edition. Widely regarded as the reference work in the field, it features new chapters focusing on statistical aspects of data generated by new sequencing technologies, including sequence-based functional assays. It expands on previous coverage of the many processes between genotype and phenotype, including gene expression and epigenetics, as well as metabolomics. It also examines population genetics and evolutionary models and inference, with new chapters on the multi-species coalescent, admixture and ancient DNA, as well as genetic association studies including causal analyses and variant interpretation. The Handbook of Statistical Genomics focuses on explaining the main ideas, analysis methods and algorithms, citing key recent and historic literature for further details and references. It also includes a glossary of terms, acronyms and abbreviations, and features extensive cross-referencing between chapters, tying the different areas together. With heavy use of up-to-date examples and references to web-based resources, this continues to be a must-have reference in a vital area of research. Provides much-needed, timely coverage of new developments in this expanding area of study Numerous, brand new chapters, for example covering bacterial genomics, microbiome and metagenomics Detailed coverage of application areas, with chapters on plant breeding, conservation and forensic genetics Extensive coverage of human genetic epidemiology, including ethical aspects Edited by one of the leading experts in the field along with rising stars as his co-editors Chapter authors are world-renowned experts in the field, and newly emerging leaders. The Handbook of Statistical Genomics is an excellent introductory text for advanced graduate students and early-career researchers involved in statistical genetics.

The Pretend Indians

The Pretend Indians PDF Author: Gretchen M. Bataille
Publisher:
ISBN: 9780608187952
Category :
Languages : en
Pages : 232

Get Book Here

Book Description


Mathematical and Statistical Methods for Genetic Analysis

Mathematical and Statistical Methods for Genetic Analysis PDF Author: Kenneth Lange
Publisher: Springer Science & Business Media
ISBN: 0387217509
Category : Medical
Languages : en
Pages : 376

Get Book Here

Book Description
Written to equip students in the mathematical siences to understand and model the epidemiological and experimental data encountered in genetics research. This second edition expands the original edition by over 100 pages and includes new material. Sprinkled throughout the chapters are many new problems.

The Statistics of Gene Mapping

The Statistics of Gene Mapping PDF Author: David Siegmund
Publisher: Springer Science & Business Media
ISBN: 0387496866
Category : Medical
Languages : en
Pages : 337

Get Book Here

Book Description
This book details the statistical concepts used in gene mapping, first in the experimental context of crosses of inbred lines and then in outbred populations, primarily humans. It presents elementary principles of probability and statistics, which are implemented by computational tools based on the R programming language to simulate genetic experiments and evaluate statistical analyses. Each chapter contains exercises, both theoretical and computational, some routine and others that are more challenging. The R programming language is developed in the text.

Introduction to Computational Biology

Introduction to Computational Biology PDF Author: Michael S. Waterman
Publisher: CRC Press
ISBN: 1351437089
Category : Mathematics
Languages : en
Pages : 456

Get Book Here

Book Description
Biology is in the midst of a era yielding many significant discoveries and promising many more. Unique to this era is the exponential growth in the size of information-packed databases. Inspired by a pressing need to analyze that data, Introduction to Computational Biology explores a new area of expertise that emerged from this fertile field- the combination of biological and information sciences. This introduction describes the mathematical structure of biological data, especially from sequences and chromosomes. After a brief survey of molecular biology, it studies restriction maps of DNA, rough landmark maps of the underlying sequences, and clones and clone maps. It examines problems associated with reading DNA sequences and comparing sequences to finding common patterns. The author then considers that statistics of pattern counts in sequences, RNA secondary structure, and the inference of evolutionary history of related sequences. Introduction to Computational Biology exposes the reader to the fascinating structure of biological data and explains how to treat related combinatorial and statistical problems. Written to describe mathematical formulation and development, this book helps set the stage for even more, truly interdisciplinary work in biology.