Computational Systems Bioinformatics (Volume 7) - Proceedings Of The Csb 2008 Conference

Computational Systems Bioinformatics (Volume 7) - Proceedings Of The Csb 2008 Conference PDF Author: Peter Markstein
Publisher: World Scientific
ISBN: 1908978708
Category : Science
Languages : en
Pages : 355

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Book Description
This proceedings volume contains 29 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications.The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field./a

Computational Systems Bioinformatics (Volume 7) - Proceedings Of The Csb 2008 Conference

Computational Systems Bioinformatics (Volume 7) - Proceedings Of The Csb 2008 Conference PDF Author: Peter Markstein
Publisher: World Scientific
ISBN: 1908978708
Category : Science
Languages : en
Pages : 355

Get Book Here

Book Description
This proceedings volume contains 29 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications.The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field./a

Computational Systems Bioinformatics - Proceedings Of The Conference Csb 2006

Computational Systems Bioinformatics - Proceedings Of The Conference Csb 2006 PDF Author: Peter Markstein
Publisher: World Scientific
ISBN: 190897947X
Category : Science
Languages : en
Pages : 418

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Book Description
This volume contains about 40 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications. There are also abstracts from the keynote addresses and invited talks.The papers cover not only theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field./a

Computational Systems Bioinformatics

Computational Systems Bioinformatics PDF Author: Peter Markstein
Publisher: Imperial College Press
ISBN: 1848162642
Category : Mathematics
Languages : en
Pages : 355

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Book Description
This proceedings volume contains 29 papers covering many of the latest developments in the fast-growing field of bioinformatics. The contributions span a wide range of topics, including computational genomics and genetics, protein function and computational proteomics, the transcriptome, structural bioinformatics, microarray data analysis, motif identification, biological pathways and systems, and biomedical applications.The papers not only cover theoretical aspects of bioinformatics but also delve into the application of new methods, with input from computation, engineering and biology disciplines. This multidisciplinary approach to bioinformatics gives these proceedings a unique viewpoint of the field.

Algorithms in Structural Molecular Biology

Algorithms in Structural Molecular Biology PDF Author: Bruce R. Donald
Publisher: MIT Press
ISBN: 0262548798
Category : Science
Languages : en
Pages : 497

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Book Description
An overview of algorithms important to computational structural biology that addresses such topics as NMR and design and analysis of proteins.Using the tools of information technology to understand the molecular machinery of the cell offers both challenges and opportunities to computational scientists. Over the past decade, novel algorithms have been developed both for analyzing biological data and for synthetic biology problems such as protein engineering. This book explains the algorithmic foundations and computational approaches underlying areas of structural biology including NMR (nuclear magnetic resonance); X-ray crystallography; and the design and analysis of proteins, peptides, and small molecules. Each chapter offers a concise overview of important concepts, focusing on a key topic in the field. Four chapters offer a short course in algorithmic and computational issues related to NMR structural biology, giving the reader a useful toolkit with which to approach the fascinating yet thorny computational problems in this area. A recurrent theme is understanding the interplay between biophysical experiments and computational algorithms. The text emphasizes the mathematical foundations of structural biology while maintaining a balance between algorithms and a nuanced understanding of experimental data. Three emerging areas, particularly fertile ground for research students, are highlighted: NMR methodology, design of proteins and other molecules, and the modeling of protein flexibility. The next generation of computational structural biologists will need training in geometric algorithms, provably good approximation algorithms, scientific computation, and an array of techniques for handling noise and uncertainty in combinatorial geometry and computational biophysics. This book is an essential guide for young scientists on their way to research success in this exciting field.

Advanced Markov Chain Monte Carlo Methods

Advanced Markov Chain Monte Carlo Methods PDF Author: Faming Liang
Publisher: John Wiley & Sons
ISBN: 1119956803
Category : Mathematics
Languages : en
Pages : 308

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Book Description
Markov Chain Monte Carlo (MCMC) methods are now an indispensable tool in scientific computing. This book discusses recent developments of MCMC methods with an emphasis on those making use of past sample information during simulations. The application examples are drawn from diverse fields such as bioinformatics, machine learning, social science, combinatorial optimization, and computational physics. Key Features: Expanded coverage of the stochastic approximation Monte Carlo and dynamic weighting algorithms that are essentially immune to local trap problems. A detailed discussion of the Monte Carlo Metropolis-Hastings algorithm that can be used for sampling from distributions with intractable normalizing constants. Up-to-date accounts of recent developments of the Gibbs sampler. Comprehensive overviews of the population-based MCMC algorithms and the MCMC algorithms with adaptive proposals. This book can be used as a textbook or a reference book for a one-semester graduate course in statistics, computational biology, engineering, and computer sciences. Applied or theoretical researchers will also find this book beneficial.

Mixture Models

Mixture Models PDF Author: Weixin Yao
Publisher: CRC Press
ISBN: 1040009875
Category : Mathematics
Languages : en
Pages : 398

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Book Description
Mixture models are a powerful tool for analyzing complex and heterogeneous datasets across many scientific fields, from finance to genomics. Mixture Models: Parametric, Semiparametric, and New Directions provides an up-to-date introduction to these models, their recent developments, and their implementation using R. It fills a gap in the literature by covering not only the basics of finite mixture models, but also recent developments such as semiparametric extensions, robust modeling, label switching, and high-dimensional modeling. Features Comprehensive overview of the methods and applications of mixture models Key topics include hypothesis testing, model selection, estimation methods, and Bayesian approaches Recent developments, such as semiparametric extensions, robust modeling, label switching, and high-dimensional modeling Examples and case studies from such fields as astronomy, biology, genomics, economics, finance, medicine, engineering, and sociology Integrated R code for many of the models, with code and data available in the R Package MixSemiRob Mixture Models: Parametric, Semiparametric, and New Directions is a valuable resource for researchers and postgraduate students from statistics, biostatistics, and other fields. It could be used as a textbook for a course on model-based clustering methods, and as a supplementary text for courses on data mining, semiparametric modeling, and high-dimensional data analysis.

Data Mining

Data Mining PDF Author: Mehmed Kantardzic
Publisher: John Wiley & Sons
ISBN: 1118029135
Category : Computers
Languages : en
Pages : 554

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Book Description
This book reviews state-of-the-art methodologies and techniques for analyzing enormous quantities of raw data in high-dimensional data spaces, to extract new information for decision making. The goal of this book is to provide a single introductory source, organized in a systematic way, in which we could direct the readers in analysis of large data sets, through the explanation of basic concepts, models and methodologies developed in recent decades. If you are an instructor or professor and would like to obtain instructor’s materials, please visit http://booksupport.wiley.com If you are an instructor or professor and would like to obtain a solutions manual, please send an email to: [email protected]

Neural Information Processing

Neural Information Processing PDF Author: Masumi Ishikawa
Publisher: Springer Science & Business Media
ISBN: 3540691596
Category : Computers
Languages : en
Pages : 1120

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Book Description
The two volume set LNCS 4984 and LNCS 4985 constitutes the thoroughly refereed post-conference proceedings of the 14th International Conference on Neural Information Processing, ICONIP 2007, held in Kitakyushu, Japan, in November 2007, jointly with BRAINIT 2007, the 4th International Conference on Brain-Inspired Information Technology. The 228 revised full papers presented were carefully reviewed and selected from numerous ordinary paper submissions and 15 special organized sessions. The 116 papers of the first volume are organized in topical sections on computational neuroscience, learning and memory, neural network models, supervised/unsupervised/reinforcement learning, statistical learning algorithms, optimization algorithms, novel algorithms, as well as motor control and vision. The second volume contains 112 contributions related to statistical and pattern recognition algorithms, neuromorphic hardware and implementations, robotics, data mining and knowledge discovery, real world applications, cognitive and hybrid intelligent systems, bioinformatics, neuroinformatics, brain-conputer interfaces, and novel approaches.

Mixtures

Mixtures PDF Author: Kerrie L. Mengersen
Publisher: John Wiley & Sons
ISBN: 1119998441
Category : Mathematics
Languages : en
Pages : 352

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Book Description
This book uses the EM (expectation maximization) algorithm to simultaneously estimate the missing data and unknown parameter(s) associated with a data set. The parameters describe the component distributions of the mixture; the distributions may be continuous or discrete. The editors provide a complete account of the applications, mathematical structure and statistical analysis of finite mixture distributions along with MCMC computational methods, together with a range of detailed discussions covering the applications of the methods and features chapters from the leading experts on the subject. The applications are drawn from scientific discipline, including biostatistics, computer science, ecology and finance. This area of statistics is important to a range of disciplines, and its methodology attracts interest from researchers in the fields in which it can be applied.

Algorithms in Bioinformatics

Algorithms in Bioinformatics PDF Author: Rita Casadio
Publisher: Springer
ISBN: 3540318127
Category : Science
Languages : en
Pages : 446

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Book Description
We are pleased to present the proceedings of the 5th Workshop on Algorithms in Bioinformatics (WABI 2005) which took place in Mallorca, Spain, October 3–6, 2005.