Towards Increasing Lignocellulose to Biofuel Conversion by Clostridium Thermocellum

Towards Increasing Lignocellulose to Biofuel Conversion by Clostridium Thermocellum PDF Author: Alan Froese
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

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Book Description
Alternative low-carbon transportation fuels, such as biofuels, are needed to replace or supplement fossil fuels in order to lower global greenhouse gas emissions and combat climate change. Lignocellulosic biofuels have relatively low carbon emissions and are created using the non-food parts of crops and other plants, such as the leaves and stems, which are comprised mostly of a tough material called lignocellulose, composed of cellulose, hemicellulose, and lignin. One of the best lignocellulose degraders found in nature that is also capable of fermenting the released sugars to ethanol is Clostridium thermocellum, although improvements in both lignocellulose hydrolysis extent and ethanol yields are needed for commercial viability. C. thermocellum, considered a cellulose-degrading specialist, was co-cultured with two different hemicellulose-specialists, C. stercorarium and Thermoanaerobacter thermohydrosulfuricus. The hypothesis was that the co-cultures might degrade more lignocellulose owing to the additional hydrolytic enzymes supplied by the partners and their ability to uptake the inhibitory hemicellulose sugars. All co-culture combinations were found to solubilize more wheat straw, among other lignocellulose materials, and produce more end-products, including ethanol, than C. thermocellum alone. These co-cultures were stable over multiple serial passages, on either wheat straw or pure cellulose, although some evidence of carbon competition was observed. The tri-culture was successfully used to screen the digestibility of various lignocellulose materials, revealing substantial difference between cattail harvested in different seasons. Cross-feeding of vital growth factors was observed between the various co-culture members in a defined medium. The metabolism of C. thermocellum is atypical compared to many organisms, including the absence of a pyruvate kinase, and its substitution with both a malate shunt and a putative pyruvate phosphate dikinase (PPDK), which may act to increase net ATP yields from glycolysis. The PPDK was cloned into E. coli, expressed, purified, and characterized, confirming its function as a PPDK for glycolysis and revealing strong activation by ammonium. The kinetic characterization of the PPDK will help inform future studies that measure and model levels of important intracellular metabolites, such as pyrophosphate and ammonium, to better understand the metabolism of C. thermocellum and allow further metabolic engineering to increase ethanol yields.

Towards Increasing Lignocellulose to Biofuel Conversion by Clostridium Thermocellum

Towards Increasing Lignocellulose to Biofuel Conversion by Clostridium Thermocellum PDF Author: Alan Froese
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

Get Book Here

Book Description
Alternative low-carbon transportation fuels, such as biofuels, are needed to replace or supplement fossil fuels in order to lower global greenhouse gas emissions and combat climate change. Lignocellulosic biofuels have relatively low carbon emissions and are created using the non-food parts of crops and other plants, such as the leaves and stems, which are comprised mostly of a tough material called lignocellulose, composed of cellulose, hemicellulose, and lignin. One of the best lignocellulose degraders found in nature that is also capable of fermenting the released sugars to ethanol is Clostridium thermocellum, although improvements in both lignocellulose hydrolysis extent and ethanol yields are needed for commercial viability. C. thermocellum, considered a cellulose-degrading specialist, was co-cultured with two different hemicellulose-specialists, C. stercorarium and Thermoanaerobacter thermohydrosulfuricus. The hypothesis was that the co-cultures might degrade more lignocellulose owing to the additional hydrolytic enzymes supplied by the partners and their ability to uptake the inhibitory hemicellulose sugars. All co-culture combinations were found to solubilize more wheat straw, among other lignocellulose materials, and produce more end-products, including ethanol, than C. thermocellum alone. These co-cultures were stable over multiple serial passages, on either wheat straw or pure cellulose, although some evidence of carbon competition was observed. The tri-culture was successfully used to screen the digestibility of various lignocellulose materials, revealing substantial difference between cattail harvested in different seasons. Cross-feeding of vital growth factors was observed between the various co-culture members in a defined medium. The metabolism of C. thermocellum is atypical compared to many organisms, including the absence of a pyruvate kinase, and its substitution with both a malate shunt and a putative pyruvate phosphate dikinase (PPDK), which may act to increase net ATP yields from glycolysis. The PPDK was cloned into E. coli, expressed, purified, and characterized, confirming its function as a PPDK for glycolysis and revealing strong activation by ammonium. The kinetic characterization of the PPDK will help inform future studies that measure and model levels of important intracellular metabolites, such as pyrophosphate and ammonium, to better understand the metabolism of C. thermocellum and allow further metabolic engineering to increase ethanol yields.

Improving Metabolic Engineering and Characterization of Clostridium Thermocellum for Improved Cellulosic Ethanol Production

Improving Metabolic Engineering and Characterization of Clostridium Thermocellum for Improved Cellulosic Ethanol Production PDF Author: Beth Alexandra Papanek
Publisher:
ISBN:
Category : Biomass energy
Languages : en
Pages : 91

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Book Description
Biofules are an important option for humanity to move away from its dependence on fossil fuels. Transitioning from food crops to lignocellulosic alternatives for the production of biofuels is equally important. Most commonly, biofuels are produced using a crop such as corn or soybeans to feed sugars to the yeast, Saccharomyces cerevisiae for the fermentation of ethanol. Lignocellulosic biofuel production would eliminate the need for food crops and transition to biomass such as switchgrass, poplar, or corn stover. Currently, lignocellulosic biofuel production is limited primarily because of the cost of converting the biomass to fermentable sugars than can then be metabolized by yeast. To overcome this barrier, a process must be employed that can convert lignocellulosic biomass directly to fuels and chemicals quickly and affordably. Clostridium thermocellum is one of the most promising candidates for the production of advanced biofuels because of its potential ability to convert cellulose directly to ethanol without the expensive addition of enzymes. Challenges to implementing C. thermocellum on an industrial scale still exist including side product formation, slow growth, limited titers, inhibition on high solids loadings, and a limited ability to perform genetic engineering. This thesis considers all of these concerns with C. thermocellum and attempts to systematically improve each characteristic to produce an industrially relevant strain of C. thermocellum for advanced biofuel production. Metabolic engineering is applied for the elimination of undesirable fermentation products. Laboratory evolution and medium supplementation are used to improve and understand the mechanisms that influence growth rate, and systematic approaches are used to improve transformation for more efficient genetic engineering of C. thermocellum in the future.

Integrated Omics Analyses Reveal the Details of Metabolic Adaptation of Clostridium Thermocellum to Lignocellulose-derived Growth Inhibitors Released During the Deconstruction of Switchgrass

Integrated Omics Analyses Reveal the Details of Metabolic Adaptation of Clostridium Thermocellum to Lignocellulose-derived Growth Inhibitors Released During the Deconstruction of Switchgrass PDF Author:
Publisher:
ISBN:
Category :
Languages : en
Pages : 14

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Book Description
Clostridium thermocellum is capable of solubilizing and converting lignocellulosic biomass into ethanol. Though much of the work-to-date has centered on characterizing the organism s metabolism during growth on model cellulosic substrates, such as cellobiose, Avicel, or filter paper, it is vitally important to understand it metabolizes more complex, lignocellulosic substrates to identify relevant industrial bottlenecks that could undermine efficient biofuel production. To this end, we have examined a time course progression of C. thermocellum grown on switchgrass to assess the metabolic and protein changes that occur during the conversion of plant biomass to ethanol. The most striking feature of the metabolome was the observed accumulation of long-chain, branched fatty acids over time, implying an adaptive restructuring of C. thermocellum s cellular membrane as the culture progresses. This is likely a response to the gradual build-up of lignocellulose-derived inhibitory compounds detected as the organism deconstructs the switchgrass to access the embedded cellulose and includes 4-hydroxybenzoic acid, vanillic acid, ferulic acid, p-coumaric acid and vanillin. Corroborating the metabolomics data, proteomic analysis revealed a corresponding time-dependent increase in enzymes involved in the interconversion of branched amino acids valine, leucine and isoleucine to iso- and anteiso-fatty acid precursors. Furthermore, the metabolic accumulation of hemicellulose-derived sugars and sugar-alcohols concomitant with increased abundance of enzymes involved in C5 sugar metabolism / the pentose phosphate pathway, indicate that C. thermocellum either shifts glycolytic intermediates to alternate pathways to modulate overall carbon flux or is simply a response to C5 sugar metabolite pools that build during lignocellulose deconstruction.

Processing of Lignocellulosics Feedstocks for Biofuels and Co-products Via Consolidated Bioprocessing with the Thermophilic Bacterium, Clostridium Thermocellum Strain DSMZ 1237

Processing of Lignocellulosics Feedstocks for Biofuels and Co-products Via Consolidated Bioprocessing with the Thermophilic Bacterium, Clostridium Thermocellum Strain DSMZ 1237 PDF Author: Valery Agbor
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

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Book Description
Processing of lignocellulosic biomass for transportation fuels and other biocommodities in integrated biorefineries has been proposed as the future for emerging sustainable economies. Currently bioprocessing strategies are all multi-step processes involving extensive physicochemical pretreatments and costly amounts of exogenous enzyme addition. Consolidated bioprocessing (CBP), or direct microbial conversion, is a strategy that combines all the stages of production into one step, thus avoiding the use of expensive pretreatments and exogenous enzymes that reduce the economic viability of the products produced. With a growing trend towards increased consolidation, most of the reported work on CBP has been conducted with soluble sugars or commercial reagent grade cellulose. For CBP to become practical fermentative guidelines with native feedstocks and purified cellulose need to be delineated through specific substrate characterization as it relates to possible industrial fermentation. By carefully reviewing the fundamentals of biomass pretreatments for CBP, a comparative assessment of the fermentability of non-food agricultural residue and processed biomass was conducted with Clostridium thermocellum DSMZ 1237. Cell growth, and both gaseous and liquid fermentation end-product profiles of C. thermocellum as a CBP processing candidate was characterised. Batch fermentation experiments to investigate the effect of cellulose content, pretreatment, and substrate concentration, revealed that higher yields were correlated with higher cellulose content. Pretreatment of native substrates that increased access of the bacterial cells and enzymes to cellulose chains in the biomass substrate were key parameters that determined the overall bioconversion of a given feedstock to end-products. The contribution of amorphous cellulose (CAC) in different biomass substrates subjected to the same pretreatment conditions was identified as a novel factor that contributed to differences in bioconversion and end-product synthesis patterns. Although the overall yield of end products was low following bioaugmentation with exogenous glycosyl hydrolases from free-enzyme systems and cellulosome extracts. Treatment of biomass substrates with glycosyl hydrolase enzymes was observed to increase the rate of bioconversion of native feedstocks in biphasic manner during fermentation with C. thermocellum. A "quotient of accessibility" was identified as a feedstock agnostic guideline for biomass digestibility.

Lignocellulose Conversion

Lignocellulose Conversion PDF Author: Vincenza Faraco
Publisher: Springer Science & Business Media
ISBN: 3642378617
Category : Science
Languages : en
Pages : 207

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Book Description
Bioethanol has been recognized as a potential alternative to petroleum-derived transportation fuels. Even if cellulosic biomass is less expensive than corn and sugarcane, the higher costs for its conversion make the near-term price of cellulosic ethanol higher than that of corn ethanol and even more than that of sugarcane ethanol. Conventional process for bioethanol production from lignocellulose includes a chemical/physical pre-treatment of lignocellulose for lignin removal, mostly based on auto hydrolysis and acid hydrolysis, followed by saccharification of the free accessible cellulose portions of the biomass. The highest yields of fermentable sugars from cellulose portion are achieved by means of enzymatic hydrolysis, currently carried out using a mix of cellulases from the fungus Trichoderma reesei. Reduction of (hemi)cellulases production costs is strongly required to increase competitiveness of second generation bioethanol production. The final step is the fermentation of sugars obtained from saccharification, typically performed by the yeast Saccharomyces cerevisiae. The current process is optimized for 6-carbon sugars fermentation, since most of yeasts cannot ferment 5-carbon sugars. Thus, research is aimed at exploring new engineered yeasts abilities to co-ferment 5- and 6-carbon sugars. Among the main routes to advance cellulosic ethanol, consolidate bio-processing, namely direct conversion of biomass into ethanol by a genetically modified microbes, holds tremendous potential to reduce ethanol production costs. Finally, the use of all the components of lignocellulose to produce a large spectra of biobased products is another challenge for further improving competitiveness of second generation bioethanol production, developing a biorefinery.

Lignocellulosic Biomass Refining for Second Generation Biofuel Production

Lignocellulosic Biomass Refining for Second Generation Biofuel Production PDF Author: Ponnusami V.
Publisher: CRC Press
ISBN: 1000890066
Category : Technology & Engineering
Languages : en
Pages : 307

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Book Description
Describes technological advancements for bioethanol production from lignocellulosic waste Provides a roadmap for the production and utilization of 2G biofuels Introduces the strategic role of metabolic engineering in the development of 2G biofuels Discusses technological advancements, life cycle assessment and prospects Explores novel potential lignocellulosic biomass for 2G biofuels

Biological Concerstion of Biomass for Fuels and Chemicals

Biological Concerstion of Biomass for Fuels and Chemicals PDF Author: Jianzhong Sun
Publisher: Royal Society of Chemistry
ISBN: 1849734240
Category : Science
Languages : en
Pages : 426

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Book Description
This book covers biomass modification to facilitate the industrial degradation processing and other characteristics of feedstocks and new technologies for the conversion of lignocelluloses into biofuels and other products.

Recent Advances in Bioconversion of Lignocellulose to Biofuels and Value Added Chemicals within the Biorefinery Concept

Recent Advances in Bioconversion of Lignocellulose to Biofuels and Value Added Chemicals within the Biorefinery Concept PDF Author: Edivaldo Ximenes Ferreira Filho
Publisher: Elsevier
ISBN: 0128182245
Category : Technology & Engineering
Languages : en
Pages : 346

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Book Description
Recent Advances in Bioconversion of Lignocellulose to Biofuels and Value Added Chemicals within the Biorefinery Concept covers the latest developments on biorefineries, along with their potential use for the transformation of residues into a broad range of more valuable products. Within this context, the book discusses the enzymatic conversion process of lignocellulosic biomass to generate fuels and other products in a unified approach. It focuses on new approaches to increase enzymatic production by microorganisms, the action of microbial inhibitors, and strategies for their removal. Furthermore, it outlines the benefits of this integrated approach for generating value-added products and the benefits to social and economic aspects, circular bio economy, HUBs and perspectives. - Covers the mechanisms of enzymatic conversion of biomass into value-added products - Discusses bioproducts derived from lignocellulose and their applications - Includes discussions on design, development and the technologies needed for the sustainable manufacture of materials and chemicals - Offers a techno-economic evaluation of biorefineries for integrated sustainability assessments - Discusses the socioeconomic and cultural-economic perspectives of the lignocellulosic biorefinery - Presents a virtual biorefinery as an integrated approach to evaluate the lignocellulose production chain

Enzymatic Conversion of Biomass for Fuels Production

Enzymatic Conversion of Biomass for Fuels Production PDF Author: Michael E. Himmel
Publisher:
ISBN:
Category : Language Arts & Disciplines
Languages : en
Pages : 522

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Book Description
Discusses the use of enzymatic and microbial biocatalysis for transformation of biomass to liquid or gaseous fuels. Explores metabolic pathway engineering. Discusses characterization of new hydrolytic enzymes. Presents new microorganisms and fermentation techniques. Focuses on lignocellulosic biomass conversion technology.

Pretreatment of Lignocellulosic Biomass for Biofuel Production

Pretreatment of Lignocellulosic Biomass for Biofuel Production PDF Author: Pratima Bajpai
Publisher: Springer
ISBN: 9811006873
Category : Technology & Engineering
Languages : en
Pages : 93

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Book Description
The book describes the pretreatment of lignocellulosic biomass for biomass-to-biofuel conversion processes, which is an important step in increasing ethanol production for biofuels. It also highlights the main challenges and suggests possible ways to make these technologies feasible for the biofuel industry. The biological conversion of cellulosic biomass into bioethanol is based on the chemical and biological breakdown of biomass into aqueous sugars, for example using hydrolytic enzymes. The fermentable sugars can then be further processed into ethanol or other advanced biofuels. Pretreatment is required to break down the lignin structure and disrupt the crystalline structure of cellulose so that the acids or enzymes can easily access and hydrolyze the cellulose. Pre-treatment can be the most expensive process in converting biomass to fuel, but there is great potential for improving the efficiency and lowering costs through further research and development. This book is aimed at academics and industrial practitioners who are interested in the higher production of ethanol for biofuels.