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Author: David B. Neale
Publisher: Springer
ISBN: 3319468073
Category : Science
Languages : en
Pages : 593
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Book Description
This book is the first comprehensive volume on conifers detailing their genomes, variations, and evolution. The book begins with general information about conifers such as taxonomy, geography, reproduction, life history, and social and economic importance. Then topics discussed include the full genome sequence, complex traits, phenotypic and genetic variations, landscape genomics, and forest health and conservation. This book also synthesizes the research included to provide a bigger picture and suggest an evolutionary trajectory. As a large plant family, conifers are an important part of economic botany. The group includes the pines, spruces, firs, larches, yews, junipers, cedars, cypresses, and sequoias. Of the phylum Coniferophyta, conifers typically bear cones and evergreen leaves. Recently, there has been much data available in conifer genomics with the publication of several crop and non-crop genome sequences. In addition to their economic importance, conifers are an important habitat for humans and animals, especially in developing parts of the world. The application of genomics for improving the productivity of conifer crops holds great promise to help provide resources for the most needy in the world.
Author: David B. Neale
Publisher: Springer
ISBN: 3319468073
Category : Science
Languages : en
Pages : 593
Get Book Here
Book Description
This book is the first comprehensive volume on conifers detailing their genomes, variations, and evolution. The book begins with general information about conifers such as taxonomy, geography, reproduction, life history, and social and economic importance. Then topics discussed include the full genome sequence, complex traits, phenotypic and genetic variations, landscape genomics, and forest health and conservation. This book also synthesizes the research included to provide a bigger picture and suggest an evolutionary trajectory. As a large plant family, conifers are an important part of economic botany. The group includes the pines, spruces, firs, larches, yews, junipers, cedars, cypresses, and sequoias. Of the phylum Coniferophyta, conifers typically bear cones and evergreen leaves. Recently, there has been much data available in conifer genomics with the publication of several crop and non-crop genome sequences. In addition to their economic importance, conifers are an important habitat for humans and animals, especially in developing parts of the world. The application of genomics for improving the productivity of conifer crops holds great promise to help provide resources for the most needy in the world.
Author: Oldenburg Oldenburg Press
Publisher:
ISBN: 9781523764426
Category :
Languages : en
Pages : 40
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Book Description
HiC-Pro is an optimized and flexible pipeline for processing Hi-C data from raw reads to normalized contact maps. HiC-Pro maps reads, detects valid ligation products, performs quality controls and generates intra- and inter-chromosomal contact maps. It includes a fast implementation of the iterative correction method and is based on a memory-efficient data format for Hi-C contact maps. In addition, HiC-Pro can use phased genotype data to build allele-specific contact maps. We applied HiC-Pro to different Hi-C datasets, demonstrating its ability to easily process large data in a reasonable time. Source code and documentation are available at http://github.com/nservant/HiC-Pro.
Author: Ilga M. Porth
Publisher: Springer
ISBN: 9783030210038
Category : Science
Languages : en
Pages : 218
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Book Description
This book offers comprehensive information on the genomics of spruces (Picea spp.), naturally abundant conifer tree species that are widely distributed in the Northern Hemisphere. Due to their tremendous ecological and economic importance, the management of forest genetic resources has chiefly focused on conservation and tree improvement. A draft genome sequence of the 20-gigabase Norway spruce genome was published in the journal Nature in 2013. Continuous efforts to improve the spruce genome assembly are underway, but are hindered by the inherent characteristics of conifer genomes: high amounts of repetitive sequences (introns and transposable elements) in the genome and large gene family expansions with regards to abiotic stress, secondary metabolism and spruces' defense responses to pathogens and herbivory. This book presents the latest information on the status of genome assemblies, provides detailed insights into transposable elements and methylation patterns, and highlights the extensive genomic resources available for inferring population genomics and climate adaptation, as well as emerging genomics tools for tree improvement programs. In addition, this volume features whole-genome comparisons among conifer species, and demonstrates how functional genomics can be used to improve gene function annotations. The book closes with an outlook on emerging fields of research in spruce genomics.
Author: Jean-Nicolas Volff
Publisher: Karger Medical and Scientific Publishers
ISBN: 3805584911
Category : Medical
Languages : en
Pages : 155
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Book Description
Recent major advances in the field of comparative genomics and cytogenomics of plants, particularly associated with the completion of ambitious genome projects, have uncovered astonishing facets of the architecture and evolutionary history of plant genomes. The aim of this book was to review these recent developments as well as their implications in our understanding of the mechanisms which drive plant diversity. New insights into the evolution of gene functions, gene families and genome size are presented, with particular emphasis on the evolutionary impact of polyploidization and transposable elements. Knowledge on the structure and evolution of plant sex chromosomes, centromeres and microRNAs is reviewed and updated. Taken together, the contributions by internationally recognized experts present a panoramic overview of the structural features and evolutionary dynamics of plant genomes.This volume of Genome Dynamics will provide researchers, teachers and students in the fields of biology and agronomy with a valuable source of current knowledge on plant genomes.
Author: Ricardo Utsunomia
Publisher: Frontiers Media SA
ISBN: 2889764915
Category : Science
Languages : en
Pages : 157
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Book Description
Author: Marilena Idžojtić
Publisher: Academic Press
ISBN: 0128196459
Category : Nature
Languages : en
Pages : 800
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Book Description
Dendrology: Cones, Flowers, Fruits and Seeds offers a comprehensive overview of the morphology of reproductive organs of woody plants of Europe in one resource. The book contains 2020 woody taxa (845 species, 58 subspecies, 38 varieties, 13 forms, 40 hybrids and 1026 cultivars), belonging to 400 genera and 121 families. It includes 447 taxa of trees and shrubs that are autochthonous in Europe and numerous ornamental species that originate from North America, Asia, South America, Australia and Africa, along with invasive woody species. Accompanied by thousands of original photographs, the book is designed to efficiently guide the reader to accurate identification. Other features include taxa organized in alphabetical order of their botanical names, flowering and fruiting time, mode of fruit or seed dispersal, and distribution range, making this a must-have reference for students and researchers in dendrology, botany, forestry, forest management and conservation, arboriculture and horticulture. - Includes 2,020 taxa of trees and shrubs important for the European dendrology - Provides detailed descriptions of reproductive organs and data on the reproductive biology of the described taxa - Contains 6,644 original, high-quality photographs of habits, cones, flowers, fruits and seeds
Author:
Publisher: Academic Press
ISBN: 0128134585
Category : Science
Languages : en
Pages : 398
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Book Description
Plastid Genome Evolution, Volume 85 provides a summary of recent research on plastid genome variation and evolution across photosynthetic organisms. It covers topics ranging from the causes and consequences of genomic changes, to the phylogenetic utility of plastomes for resolving relationships across the photosynthetic tree of life. This newly released volume presents thorough, up-to-date information on coevolution between the plastid and nuclear genomes, with chapters on plastid autonomy vs. nuclear control over plastid function, establishment and genetic integration of plastids, plastid genomes in alveolate protists, plastid genomes of glaucophytes, the evolution of the plastid genome in chlorophyte and streptophyte green algae, and more. - Provides comprehensive coverage of plastid genome variation by leading researchers in the field - Presents a broad range of taxonomic groups, ranging from single and multicellular algae, to the major clades of land plants - Includes thorough, up-to-date information on coevolution between the plastid and nuclear genomes
Author: Christophe Plomion
Publisher: CRC Press
ISBN: 1439876495
Category : Science
Languages : en
Pages : 476
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Book Description
With contributions by internationally reputed researchers in the field, this book presents the implications of the genomic revolution for conifers-promoting a better understanding of the evolution of these organisms as well as new knowledge about the molecular basis of quantitative trait variation. Both of these discoveries play important roles in
Author: Frederick C. Meinzer
Publisher: Springer Science & Business Media
ISBN: 9400712421
Category : Nature
Languages : en
Pages : 511
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Book Description
Millions of trees live and grow all around us, and we all recognize the vital role they play in the world’s ecosystems. Publicity campaigns exhort us to plant yet more. Yet until recently comparatively little was known about the root causes of the physical changes that attend their growth. Since trees typically increase in size by three to four orders of magnitude in their journey to maturity, this gap in our knowledge has been a crucial issue to address. Here at last is a synthesis of the current state of our knowledge about both the causes and consequences of ontogenetic changes in key features of tree structure and function. During their ontogeny, trees undergo numerous changes in their physiological function, the structure and mechanical properties of their wood, and overall architecture and allometry. This book examines the central interplay between these changes and tree size and age. It also explores the impact these changes can have, at the level of the individual tree, on the emerging characteristics of forest ecosystems at various stages of their development. The analysis offers an explanation for the importance of discriminating between the varied physical properties arising from the nexus of size and age, as well as highlighting the implications these ontogenetic changes have for commercial forestry and climate change. This important and timely summation of our knowledge base in this area, written by highly respected researchers, will be of huge interest, not only to researchers, but also to forest managers and silviculturists.
Author: Isabel Allona
Publisher: Frontiers Media SA
ISBN: 2889631788
Category :
Languages : en
Pages : 185
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Book Description
This Research Topic addresses research in genomics and biotechnology to improve the growth and quality of forest trees for wood, pulp, biorefineries and carbon capture. Forests are the world’s greatest repository of terrestrial biomass and biodiversity. Forests serve critical ecological services, supporting the preservation of fauna and flora, and water resources. Planted forests also offer a renewable source of timber, for pulp and paper production, and the biorefinery. Despite their fundamental role for society, thousands of hectares of forests are lost annually due to deforestation, pests, pathogens and urban development. As a consequence, there is an increasing need to develop trees that are more productive under lower inputs, while understanding how they adapt to the environment and respond to biotic and abiotic stress. Forest genomics and biotechnology, disciplines that study the genetic composition of trees and the methods required to modify them, began over a quarter of a century ago with the development of the first genetic maps and establishment of early methods of genetic transformation. Since then, genomics and biotechnology have impacted all research areas of forestry. Genome analyses of tree populations have uncovered genes involved in adaptation and response to biotic and abiotic stress. Genes that regulate growth and development have been identified, and in many cases their mechanisms of action have been described. Genetic transformation is now widely used to understand the roles of genes and to develop germplasm that is more suitable for commercial tree plantations. However, in contrast to many annual crops that have benefited from centuries of domestication and extensive genomic and biotechnology research, in forestry the field is still in its infancy. Thus, tremendous opportunities remain unexplored. This Research Topic aims to briefly summarize recent findings, to discuss long-term goals and to think ahead about future developments and how this can be applied to improve growth and quality of forest trees.
