Spatial Dynamics and Pattern Formation in Biological Populations

Spatial Dynamics and Pattern Formation in Biological Populations PDF Author: Ranjit Kumar Upadhyay
Publisher: CRC Press
ISBN: 100033435X
Category : Mathematics
Languages : en
Pages : 383

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Book Description
The book provides an introduction to deterministic (and some stochastic) modeling of spatiotemporal phenomena in ecology, epidemiology, and neural systems. A survey of the classical models in the fields with up to date applications is given. The book begins with detailed description of how spatial dynamics/diffusive processes influence the dynamics of biological populations. These processes play a key role in understanding the outbreak and spread of pandemics which help us in designing the control strategies from the public health perspective. A brief discussion on the functional mechanism of the brain (single neuron models and network level) with classical models of neuronal dynamics in space and time is given. Relevant phenomena and existing modeling approaches in ecology, epidemiology and neuroscience are introduced, which provide examples of pattern formation in these models. The analysis of patterns enables us to study the dynamics of macroscopic and microscopic behaviour of underlying systems and travelling wave type patterns observed in dispersive systems. Moving on to virus dynamics, authors present a detailed analysis of different types models of infectious diseases including two models for influenza, five models for Ebola virus and seven models for Zika virus with diffusion and time delay. A Chapter is devoted for the study of Brain Dynamics (Neural systems in space and time). Significant advances made in modeling the reaction-diffusion systems are presented and spatiotemporal patterning in the systems is reviewed. Development of appropriate mathematical models and detailed analysis (such as linear stability, weakly nonlinear analysis, bifurcation analysis, control theory, numerical simulation) are presented. Key Features Covers the fundamental concepts and mathematical skills required to analyse reaction-diffusion models for biological populations. Concepts are introduced in such a way that readers with a basic knowledge of differential equations and numerical methods can understand the analysis. The results are also illustrated with figures. Focuses on mathematical modeling and numerical simulations using basic conceptual and classic models of population dynamics, Virus and Brain dynamics. Covers wide range of models using spatial and non-spatial approaches. Covers single, two and multispecies reaction-diffusion models from ecology and models from bio-chemistry. Models are analysed for stability of equilibrium points, Turing instability, Hopf bifurcation and pattern formations. Uses Mathematica for problem solving and MATLAB for pattern formations. Contains solved Examples and Problems in Exercises. The Book is suitable for advanced undergraduate, graduate and research students. For those who are working in the above areas, it provides information from most of the recent works. The text presents all the fundamental concepts and mathematical skills needed to build models and perform analyses.

Spatial Dynamics and Pattern Formation in Biological Populations

Spatial Dynamics and Pattern Formation in Biological Populations PDF Author: Ranjit Kumar Upadhyay
Publisher: CRC Press
ISBN: 100033435X
Category : Mathematics
Languages : en
Pages : 383

Get Book Here

Book Description
The book provides an introduction to deterministic (and some stochastic) modeling of spatiotemporal phenomena in ecology, epidemiology, and neural systems. A survey of the classical models in the fields with up to date applications is given. The book begins with detailed description of how spatial dynamics/diffusive processes influence the dynamics of biological populations. These processes play a key role in understanding the outbreak and spread of pandemics which help us in designing the control strategies from the public health perspective. A brief discussion on the functional mechanism of the brain (single neuron models and network level) with classical models of neuronal dynamics in space and time is given. Relevant phenomena and existing modeling approaches in ecology, epidemiology and neuroscience are introduced, which provide examples of pattern formation in these models. The analysis of patterns enables us to study the dynamics of macroscopic and microscopic behaviour of underlying systems and travelling wave type patterns observed in dispersive systems. Moving on to virus dynamics, authors present a detailed analysis of different types models of infectious diseases including two models for influenza, five models for Ebola virus and seven models for Zika virus with diffusion and time delay. A Chapter is devoted for the study of Brain Dynamics (Neural systems in space and time). Significant advances made in modeling the reaction-diffusion systems are presented and spatiotemporal patterning in the systems is reviewed. Development of appropriate mathematical models and detailed analysis (such as linear stability, weakly nonlinear analysis, bifurcation analysis, control theory, numerical simulation) are presented. Key Features Covers the fundamental concepts and mathematical skills required to analyse reaction-diffusion models for biological populations. Concepts are introduced in such a way that readers with a basic knowledge of differential equations and numerical methods can understand the analysis. The results are also illustrated with figures. Focuses on mathematical modeling and numerical simulations using basic conceptual and classic models of population dynamics, Virus and Brain dynamics. Covers wide range of models using spatial and non-spatial approaches. Covers single, two and multispecies reaction-diffusion models from ecology and models from bio-chemistry. Models are analysed for stability of equilibrium points, Turing instability, Hopf bifurcation and pattern formations. Uses Mathematica for problem solving and MATLAB for pattern formations. Contains solved Examples and Problems in Exercises. The Book is suitable for advanced undergraduate, graduate and research students. For those who are working in the above areas, it provides information from most of the recent works. The text presents all the fundamental concepts and mathematical skills needed to build models and perform analyses.

Spatial Dynamics and Pattern Formation in Biological Populations

Spatial Dynamics and Pattern Formation in Biological Populations PDF Author: Ranjit Kumar Upadhyay
Publisher: CRC Press
ISBN: 1000334139
Category : Mathematics
Languages : en
Pages : 449

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Book Description
Covers the fundamental concepts and mathematical skills required to analyse reaction-diffusion models for biological populations. Focuses on mathematical modeling and numerical simulations using basic conceptual and classic models of population dynamics, Virus and Brain dynamics. Covers wide range of models using spatial and non-spatial approaches. Covers single, two and multispecies reaction-diffusion models from ecology and models from bio-chemistry. Uses Mathematica for problem solving and MATLAB for pattern formations. Contains solved Examples and Problems in Exercises.

Dynamics of Biological Systems

Dynamics of Biological Systems PDF Author: Michael Small
Publisher: CRC Press
ISBN: 1439853363
Category : Mathematics
Languages : en
Pages : 286

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Book Description
From the spontaneous rapid firing of cortical neurons to the spatial diffusion of disease epidemics, biological systems exhibit rich dynamic behaviour over a vast range of time and space scales. Unifying many of these diverse phenomena, Dynamics of Biological Systems provides the computational and mathematical platform from which to understand the underlying processes of the phenomena. Through an extensive tour of various biological systems, the text introduces computational methods for simulating spatial diffusion processes in excitable media, such as the human heart, as well as mathematical tools for dealing with systems of nonlinear ordinary and partial differential equations, such as neuronal activation and disease diffusion. The mathematical models and computer simulations offer insight into the dynamics of temporal and spatial biological systems, including cardiac pacemakers, artificial electrical defibrillation, pandemics, pattern formation, flocking behaviour, the interaction of autonomous agents, and hierarchical and structured network topologies. Tools from complex systems and complex networks are also presented for dealing with real phenomenological systems. With exercises and projects in each chapter, this classroom-tested text shows students how to apply a variety of mathematical and computational techniques to model and analyze the temporal and spatial phenomena of biological systems. MATLAB® implementations of algorithms and case studies are available on the author’s website.

Nonlinear Physics of Ecosystems

Nonlinear Physics of Ecosystems PDF Author: Ehud Meron
Publisher: CRC Press
ISBN: 1439826323
Category : Nature
Languages : en
Pages : 347

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Book Description
Nonlinear Physics of Ecosystems introduces the concepts and tools of pattern formation theory and demonstrates their utility in ecological research using problems from spatial ecology. Written in language understandable to both physicists and ecologists in most parts, the book reveals the mechanisms of pattern formation and pattern dynamics. It als

Cellular Automaton Modeling of Biological Pattern Formation

Cellular Automaton Modeling of Biological Pattern Formation PDF Author: Andreas Deutsch
Publisher: Birkhäuser
ISBN: 1489979808
Category : Mathematics
Languages : en
Pages : 470

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Book Description
This text explores the use of cellular automata in modeling pattern formation in biological systems. It describes several mathematical modeling approaches utilizing cellular automata that can be used to study the dynamics of interacting cell systems both in simulation and in practice. New in this edition are chapters covering cell migration, tissue development, and cancer dynamics, as well as updated references and new research topic suggestions that reflect the rapid development of the field. The book begins with an introduction to pattern-forming principles in biology and the various mathematical modeling techniques that can be used to analyze them. Cellular automaton models are then discussed in detail for different types of cellular processes and interactions, including random movement, cell migration, adhesive cell interaction, alignment and cellular swarming, growth processes, pigment cell pattern formation, tissue development, tumor growth and invasion, and Turing-type patterns and excitable media. In the final chapter, the authors critically discuss possibilities and limitations of the cellular automaton approach in modeling various biological applications, along with future research directions. Suggestions for research projects are provided throughout the book to encourage additional engagement with the material, and an accompanying simulator is available for readers to perform their own simulations on several of the models covered in the text. QR codes are included within the text for easy access to the simulator. With its accessible presentation and interdisciplinary approach, Cellular Automaton Modeling of Biological Pattern Formation is suitable for graduate and advanced undergraduate students in mathematical biology, biological modeling, and biological computing. It will also be a valuable resource for researchers and practitioners in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science. PRAISE FOR THE FIRST EDITION “An ideal guide for someone with a mathematical or physical background to start exploring biological modelling. Importantly, it will also serve as an excellent guide for experienced modellers to innovate and improve their methodologies for analysing simulation results.” —Mathematical Reviews

Integrodifference Equations in Spatial Ecology

Integrodifference Equations in Spatial Ecology PDF Author: Frithjof Lutscher
Publisher: Springer Nature
ISBN: 3030292940
Category : Mathematics
Languages : en
Pages : 390

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Book Description
This book is the first thorough introduction to and comprehensive treatment of the theory and applications of integrodifference equations in spatial ecology. Integrodifference equations are discrete-time continuous-space dynamical systems describing the spatio-temporal dynamics of one or more populations. The book contains step-by-step model construction, explicitly solvable models, abstract theory and numerical recipes for integrodifference equations. The theory in the book is motivated and illustrated by many examples from conservation biology, biological invasions, pattern formation and other areas. In this way, the book conveys the more general message that bringing mathematical approaches and ecological questions together can generate novel insights into applications and fruitful challenges that spur future theoretical developments. The book is suitable for graduate students and experienced researchers in mathematical ecology alike.

Metacommunities

Metacommunities PDF Author: Marcel Holyoak
Publisher: University of Chicago Press
ISBN: 0226350649
Category : Nature
Languages : en
Pages : 527

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Book Description
Takes the hallmarks of metapopulation theory to the next level by considering a group of communities, each of which may contain numerous populations, connected by species interactions within communities and the movement of individuals between communities. This book seeks to understand how communities work in fragmented landscapes.

Machine Learning Methods for Ecological Applications

Machine Learning Methods for Ecological Applications PDF Author: Alan H. Fielding
Publisher: Springer Science & Business Media
ISBN: 1461552893
Category : Science
Languages : en
Pages : 265

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Book Description
This is the first text aimed at introducing machine learning methods to a readership of professional ecologists. All but one of the chapters have been written by ecologists and biologists who highlight the application of a particular method to a particular class of problem.

Unifying Themes in Complex Systems

Unifying Themes in Complex Systems PDF Author: Ali A. Minai
Publisher: Springer Science & Business Media
ISBN: 3540358668
Category : Science
Languages : en
Pages : 389

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Book Description
In recent years, scientists have applied the principles of complex systems science to increasingly diverse fields. The results have been nothing short of remarkable. The Third International Conference on Complex Systems attracted over 400 researchers from around the world. The conference aimed to encourage cross-fertilization between the many disciplines represented and to deepen our understanding of the properties common to all complex systems.

Recent Advances in Mathematics for Engineering

Recent Advances in Mathematics for Engineering PDF Author: Mangey Ram
Publisher: CRC Press
ISBN: 0429575807
Category : Mathematics
Languages : en
Pages : 322

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Book Description
In recent years, mathematics has experienced amazing growth in the engineering sciences. Mathematics forms the common foundation of all engineering disciplines. This book provides a comprehensive range of mathematics applied in various fields of engineering for different tasks such as civil engineering, structural engineering, computer science, and electrical engineering, among others. It offers chapters that develop the applications of mathematics in engineering sciences, conveys the innovative research ideas, offers real-world utility of mathematics, and has a significance in the life of academics, practitioners, researchers, and industry leaders. Features Focuses on the latest research in the field of engineering applications Includes recent findings from various institutions Identifies the gaps in the knowledge in the field and provides the latest approaches Presents international studies and findings in modeling and simulation Offers various mathematical tools, techniques, strategies, and methods across different engineering fields