Randomization, Bootstrap and Monte Carlo Methods in Biology

Randomization, Bootstrap and Monte Carlo Methods in Biology PDF Author: Bryan F.J. Manly
Publisher: CRC Press
ISBN: 1482296411
Category : Mathematics
Languages : en
Pages : 468

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Book Description
Modern computer-intensive statistical methods play a key role in solving many problems across a wide range of scientific disciplines. This new edition of the bestselling Randomization, Bootstrap and Monte Carlo Methods in Biology illustrates the value of a number of these methods with an emphasis on biological applications. This textbook focuses on three related areas in computational statistics: randomization, bootstrapping, and Monte Carlo methods of inference. The author emphasizes the sampling approach within randomization testing and confidence intervals. Similar to randomization, the book shows how bootstrapping, or resampling, can be used for confidence intervals and tests of significance. It also explores how to use Monte Carlo methods to test hypotheses and construct confidence intervals. New to the Third Edition Updated information on regression and time series analysis, multivariate methods, survival and growth data as well as software for computational statistics References that reflect recent developments in methodology and computing techniques Additional references on new applications of computer-intensive methods in biology Providing comprehensive coverage of computer-intensive applications while also offering data sets online, Randomization, Bootstrap and Monte Carlo Methods in Biology, Third Edition supplies a solid foundation for the ever-expanding field of statistics and quantitative analysis in biology.

Randomization, Bootstrap and Monte Carlo Methods in Biology

Randomization, Bootstrap and Monte Carlo Methods in Biology PDF Author: Bryan F.J. Manly
Publisher: CRC Press
ISBN: 1482296411
Category : Mathematics
Languages : en
Pages : 468

Get Book Here

Book Description
Modern computer-intensive statistical methods play a key role in solving many problems across a wide range of scientific disciplines. This new edition of the bestselling Randomization, Bootstrap and Monte Carlo Methods in Biology illustrates the value of a number of these methods with an emphasis on biological applications. This textbook focuses on three related areas in computational statistics: randomization, bootstrapping, and Monte Carlo methods of inference. The author emphasizes the sampling approach within randomization testing and confidence intervals. Similar to randomization, the book shows how bootstrapping, or resampling, can be used for confidence intervals and tests of significance. It also explores how to use Monte Carlo methods to test hypotheses and construct confidence intervals. New to the Third Edition Updated information on regression and time series analysis, multivariate methods, survival and growth data as well as software for computational statistics References that reflect recent developments in methodology and computing techniques Additional references on new applications of computer-intensive methods in biology Providing comprehensive coverage of computer-intensive applications while also offering data sets online, Randomization, Bootstrap and Monte Carlo Methods in Biology, Third Edition supplies a solid foundation for the ever-expanding field of statistics and quantitative analysis in biology.

Randomization, Bootstrap and Monte Carlo Methods in Biology

Randomization, Bootstrap and Monte Carlo Methods in Biology PDF Author: Bryan F.J. Manly
Publisher: CRC Press
ISBN: 1000080501
Category : Mathematics
Languages : en
Pages : 359

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Book Description
Modern computer-intensive statistical methods play a key role in solving many problems across a wide range of scientific disciplines. Like its bestselling predecessors, the fourth edition of Randomization, Bootstrap and Monte Carlo Methods in Biology illustrates a large number of statistical methods with an emphasis on biological applications. The focus is now on the use of randomization, bootstrapping, and Monte Carlo methods in constructing confidence intervals and doing tests of significance. The text provides comprehensive coverage of computer-intensive applications, with data sets available online. Features Presents an overview of computer-intensive statistical methods and applications in biology Covers a wide range of methods including bootstrap, Monte Carlo, ANOVA, regression, and Bayesian methods Makes it easy for biologists, researchers, and students to understand the methods used Provides information about computer programs and packages to implement calculations, particularly using R code Includes a large number of real examples from a range of biological disciplines Written in an accessible style, with minimal coverage of theoretical details, this book provides an excellent introduction to computer-intensive statistical methods for biological researchers. It can be used as a course text for graduate students, as well as a reference for researchers from a range of disciplines. The detailed, worked examples of real applications will enable practitioners to apply the methods to their own biological data.

Random Number Generation and Monte Carlo Methods

Random Number Generation and Monte Carlo Methods PDF Author: James E. Gentle
Publisher: Springer Science & Business Media
ISBN: 147572960X
Category : Computers
Languages : en
Pages : 252

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Book Description
Monte Carlo simulation has become one of the most important tools in all fields of science. This book surveys the basic techniques and principles of the subject, as well as general techniques useful in more complicated models and in novel settings. The emphasis throughout is on practical methods that work well in current computing environments.

Introduction to Computer-Intensive Methods of Data Analysis in Biology

Introduction to Computer-Intensive Methods of Data Analysis in Biology PDF Author: Derek A. Roff
Publisher: Cambridge University Press
ISBN: 0521608651
Category : Medical
Languages : en
Pages : 233

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Book Description
Publisher Description

Comparing Groups

Comparing Groups PDF Author: Andrew S. Zieffler
Publisher: John Wiley & Sons
ISBN: 1118063678
Category : Social Science
Languages : en
Pages : 286

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Book Description
A hands-on guide to using R to carry out key statistical practices in educational and behavioral sciences research Computing has become an essential part of the day-to-day practice of statistical work, broadening the types of questions that can now be addressed by research scientists applying newly derived data analytic techniques. Comparing Groups: Randomization and Bootstrap Methods Using R emphasizes the direct link between scientific research questions and data analysis. Rather than relying on mathematical calculations, this book focus on conceptual explanations and the use of statistical computing in an effort to guide readers through the integration of design, statistical methodology, and computation to answer specific research questions regarding group differences. Utilizing the widely-used, freely accessible R software, the authors introduce a modern approach to promote methods that provide a more complete understanding of statistical concepts. Following an introduction to R, each chapter is driven by a research question, and empirical data analysis is used to provide answers to that question. These examples are data-driven inquiries that promote interaction between statistical methods and ideas and computer application. Computer code and output are interwoven in the book to illustrate exactly how each analysis is carried out and how output is interpreted. Additional topical coverage includes: Data exploration of one variable and multivariate data Comparing two groups and many groups Permutation tests, randomization tests, and the independent samples t-Test Bootstrap tests and bootstrap intervals Interval estimates and effect sizes Throughout the book, the authors incorporate data from real-world research studies as well aschapter problems that provide a platform to perform data analyses. A related Web site features a complete collection of the book's datasets along with the accompanying codebooks and the R script files and commands, allowing readers to reproduce the presented output and plots. Comparing Groups: Randomization and Bootstrap Methods Using R is an excellent book for upper-undergraduate and graduate level courses on statistical methods, particularlyin the educational and behavioral sciences. The book also serves as a valuable resource for researchers who need a practical guide to modern data analytic and computational methods.

Handbook of Monte Carlo Methods

Handbook of Monte Carlo Methods PDF Author: Dirk P. Kroese
Publisher: John Wiley & Sons
ISBN: 1118014952
Category : Mathematics
Languages : en
Pages : 627

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Book Description
A comprehensive overview of Monte Carlo simulation that explores the latest topics, techniques, and real-world applications More and more of today’s numerical problems found in engineering and finance are solved through Monte Carlo methods. The heightened popularity of these methods and their continuing development makes it important for researchers to have a comprehensive understanding of the Monte Carlo approach. Handbook of Monte Carlo Methods provides the theory, algorithms, and applications that helps provide a thorough understanding of the emerging dynamics of this rapidly-growing field. The authors begin with a discussion of fundamentals such as how to generate random numbers on a computer. Subsequent chapters discuss key Monte Carlo topics and methods, including: Random variable and stochastic process generation Markov chain Monte Carlo, featuring key algorithms such as the Metropolis-Hastings method, the Gibbs sampler, and hit-and-run Discrete-event simulation Techniques for the statistical analysis of simulation data including the delta method, steady-state estimation, and kernel density estimation Variance reduction, including importance sampling, latin hypercube sampling, and conditional Monte Carlo Estimation of derivatives and sensitivity analysis Advanced topics including cross-entropy, rare events, kernel density estimation, quasi Monte Carlo, particle systems, and randomized optimization The presented theoretical concepts are illustrated with worked examples that use MATLAB®, a related Web site houses the MATLAB® code, allowing readers to work hands-on with the material and also features the author's own lecture notes on Monte Carlo methods. Detailed appendices provide background material on probability theory, stochastic processes, and mathematical statistics as well as the key optimization concepts and techniques that are relevant to Monte Carlo simulation. Handbook of Monte Carlo Methods is an excellent reference for applied statisticians and practitioners working in the fields of engineering and finance who use or would like to learn how to use Monte Carlo in their research. It is also a suitable supplement for courses on Monte Carlo methods and computational statistics at the upper-undergraduate and graduate levels.

Monte Carlo and Quasi-Monte Carlo Methods in Scientific Computing

Monte Carlo and Quasi-Monte Carlo Methods in Scientific Computing PDF Author: Harald Niederreiter
Publisher: Springer Science & Business Media
ISBN: 1461225523
Category : Mathematics
Languages : en
Pages : 391

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Book Description
Scientists and engineers are increasingly making use of simulation methods to solve problems which are insoluble by analytical techniques. Monte Carlo methods which make use of probabilistic simulations are frequently used in areas such as numerical integration, complex scheduling, queueing networks, and large-dimensional simulations. This collection of papers arises from a conference held at the University of Nevada, Las Vegas, in 1994. The conference brought together researchers across a range of disciplines whose interests include the theory and application of these methods. This volume provides a timely survey of this field and the new directions in which the field is moving.

Monte Carlo Simulation and Resampling Methods for Social Science

Monte Carlo Simulation and Resampling Methods for Social Science PDF Author: Thomas M. Carsey
Publisher: SAGE Publications
ISBN: 1483324923
Category : Social Science
Languages : en
Pages : 304

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Book Description
Taking the topics of a quantitative methodology course and illustrating them through Monte Carlo simulation, this book examines abstract principles, such as bias, efficiency, and measures of uncertainty in an intuitive, visual way. Instead of thinking in the abstract about what would happen to a particular estimator "in repeated samples," the book uses simulation to actually create those repeated samples and summarize the results. The book includes basic examples appropriate for readers learning the material for the first time, as well as more advanced examples that a researcher might use to evaluate an estimator he or she was using in an actual research project. The book also covers a wide range of topics related to Monte Carlo simulation, such as resampling methods, simulations of substantive theory, simulation of quantities of interest (QI) from model results, and cross-validation. Complete R code from all examples is provided so readers can replicate every analysis presented using R.

Randomized Algorithms for Analysis and Control of Uncertain Systems

Randomized Algorithms for Analysis and Control of Uncertain Systems PDF Author: Roberto Tempo
Publisher: Springer Science & Business Media
ISBN: 1447146107
Category : Technology & Engineering
Languages : en
Pages : 363

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Book Description
The presence of uncertainty in a system description has always been a critical issue in control. The main objective of Randomized Algorithms for Analysis and Control of Uncertain Systems, with Applications (Second Edition) is to introduce the reader to the fundamentals of probabilistic methods in the analysis and design of systems subject to deterministic and stochastic uncertainty. The approach propounded by this text guarantees a reduction in the computational complexity of classical control algorithms and in the conservativeness of standard robust control techniques. The second edition has been thoroughly updated to reflect recent research and new applications with chapters on statistical learning theory, sequential methods for control and the scenario approach being completely rewritten. Features: · self-contained treatment explaining Monte Carlo and Las Vegas randomized algorithms from their genesis in the principles of probability theory to their use for system analysis; · development of a novel paradigm for (convex and nonconvex) controller synthesis in the presence of uncertainty and in the context of randomized algorithms; · comprehensive treatment of multivariate sample generation techniques, including consideration of the difficulties involved in obtaining identically and independently distributed samples; · applications of randomized algorithms in various endeavours, such as PageRank computation for the Google Web search engine, unmanned aerial vehicle design (both new in the second edition), congestion control of high-speed communications networks and stability of quantized sampled-data systems. Randomized Algorithms for Analysis and Control of Uncertain Systems (second edition) is certain to interest academic researchers and graduate control students working in probabilistic, robust or optimal control methods and control engineers dealing with system uncertainties. The present book is a very timely contribution to the literature. I have no hesitation in asserting that it will remain a widely cited reference work for many years. M. Vidyasagar

Randomization Tests

Randomization Tests PDF Author: Eugene S. Edgington
Publisher:
ISBN:
Category : Mathematics
Languages : en
Pages : 310

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Book Description
Random assignment; Calculating significance values; One-way analysis of variance and the independent t test; Repeated-measures analysis of variance and the correlated t test; Factorial designs; Multivariate designs; Correlation; Trend tests; One-subject randomization tests.