Author: Russ Altman
Publisher: World Scientific
ISBN: 9812560467
Category : Science
Languages : en
Pages : 565
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Book Description
The Pacific Symposium on Biocomputing (PSB 2005) is an international, multidisciplinary conference for the presentation and discussion of current research in the theory and application of computational methods in problems of biological significance. This latest volume in the prestigious conference series contains the contributions of top researchers from the US, the Asia-Pacific region and around the world. Sections are devoted to databases, algorithms, interfaces, visualization, modeling and other computational methods, as applied to biological problems, with emphasis on applications in data-rich areas of molecular biology.The book is an essential source of ideas, discoveries and references for academics in biocomputing, bioinformatics researchers and computer scientists.The proceedings have been selected for coverage in: ? Biochemistry & Biophysics Citation Index(tm)? Index to Scientific & Technical Proceedings? (ISTP? / ISI Proceedings)? Index to Scientific & Technical Proceedings (ISTP CDROM version / ISI Proceedings)? CC Proceedings ? Biomedical, Biological & Agricultural Sciences
Author: Russ B Altman
Publisher: World Scientific
ISBN: 9814481769
Category : Science
Languages : en
Pages : 565
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Book Description
The Pacific Symposium on Biocomputing (PSB 2005) is an international, multidisciplinary conference for the presentation and discussion of current research in the theory and application of computational methods in problems of biological significance. This latest volume in the prestigious conference series contains the contributions of top researchers from the US, the Asia-Pacific region and around the world. Sections are devoted to databases, algorithms, interfaces, visualization, modeling and other computational methods, as applied to biological problems, with emphasis on applications in data-rich areas of molecular biology.The book is an essential source of ideas, discoveries and references for academics in biocomputing, bioinformatics researchers and computer scientists.The proceedings have been selected for coverage in:
Author:
Publisher:
ISBN:
Category : Biology
Languages : en
Pages : 694
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Book Description
Author:
Publisher:
ISBN:
Category : Medical libraries
Languages : en
Pages : 246
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Book Description
Author: Satoru Miyano
Publisher: Springer
ISBN: 3540319506
Category : Computers
Languages : en
Pages : 646
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Book Description
This volume contains the papers presented at the 9th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2005), which was held in Cambridge, Massachusetts, on May 14–18, 2005. The RECOMB conference series was started in 1997 by Sorin Istrail, Pavel Pevzner and Michael Waterman. The list of previous meetings is shown below in the s- tion “Previous RECOMB Meetings. ” RECOMB 2005 was hosted by the Broad Institute of MIT and Harvard, and Boston University’s Center for Advanced - nomic Technology, and was excellently organized by the Organizing Committee Co-chairs Jill Mesirov and Simon Kasif. This year, 217 papers were submitted, of which the Program Committee - lected 39 for presentation at the meeting and inclusion in this proceedings. Each submission was refereed by at least three members of the Program Committee. After the completion of the referees’ reports, an extensive Web-based discussion took place for making decisions. From RECOMB 2005, the Steering Committee decided to publish the proceedings as a volume of Lecture Notes in Bioinf- matics (LNBI) for which the founders of RECOMB are also the editors. The prominent volume number LNBI 3500 was assigned to this proceedings. The RECOMB conference series is closely associated with the Journal of Compu- tional Biology which traditionally publishes special issues devoted to presenting full versions of selected conference papers. The RECOMB Program Committee consistedof42members,aslistedonaseparatepage. Iwouldliketothank the RECOMB 2005 Program Committee members for their dedication and hard work.
Author: Franois Kps
Publisher: World Scientific
ISBN: 981270695X
Category : Science
Languages : en
Pages : 531
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Book Description
This volume presents a timely and comprehensive overview of biological networks at all organization levels in the spirit of the complex system approach. It discusses the transversal issues and fundamental principles as well as the overall structure, dynamics, and modeling of a wide array of biological networks at the molecular, cellular, and population levels. Anchored in both empirical data and a strong theoretical background, the book therefore lends valuable credence to the complex systems approach.
Author: Li, Xiao-Li
Publisher: IGI Global
ISBN: 1466617861
Category : Medical
Languages : en
Pages : 464
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Book Description
"This book discusses the most significant research and latest practices in computational knowledge discovery approaches to bioinformatics in a cross-disciplinary manner that is useful for researchers, practitioners, academicians, mathematicians, statisticians, and computer scientists involved in the many facets of bioinformatics"--
Author: Stegmaier, Johannes
Publisher: KIT Scientific Publishing
ISBN: 3731505908
Category : Electronic computers. Computer science
Languages : en
Pages : 264
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Book Description
Multidimensional imaging techniques provide powerful ways to examine various kinds of scientific questions. The routinely produced data sets in the terabyte-range, however, can hardly be analyzed manually and require an extensive use of automated image analysis. The present work introduces a new concept for the estimation and propagation of uncertainty involved in image analysis operators and new segmentation algorithms that are suitable for terabyte-scale analyses of 3D+t microscopy images.
Author: Lise Getoor
Publisher: MIT Press
ISBN: 0262072882
Category : Computer algorithms
Languages : en
Pages : 602
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Book Description
In 'Introduction to Statistical Relational Learning', leading researchers in this emerging area of machine learning describe current formalisms, models, and algorithms that enable effective and robust reasoning about richly structured systems and data.
Author: Yael Garten
Publisher: Stanford University
ISBN:
Category :
Languages : en
Pages : 221
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Book Description
Pharmacogenomics is the study of how variation in the human genome impacts drug response in patients. It is a major driving force of "personalized medicine" in which drug choice and dosing decisions are informed by individual information such as DNA genotype. The field of pharmacogenomics is in an era of explosive growth; massive amounts of data are being collected and knowledge discovered, which promises to push forward the reality of individualized clinical care. However, this large amount of data is dispersed in many journals in the scientific literature and pharmacogenomic findings are discussed in a variety of non-standardized ways. It is thus challenging to identify important associations between drugs and molecular entities, particularly genes and gene variants. Thus, these critical connections are not easily available to investigators or clinicians who wish to survey the state of knowledge for any particular gene, drug, disease or variant. Manual efforts have attempted to catalog this information, however the rapid expansion of pharmacogenomic literature has made this approach infeasible. Natural Language Processing and text mining techniques allow us to convert free-style text to a computable, searchable format in which pharmacogenomic concepts such as genes, drugs, polymorphisms, and diseases are identified, and important links between these concepts are recorded. My dissertation describes novel computational methods to extract and predict pharmacogenomic relationships from text. In one project, we extract pharmacogenomic relationships from the primary literature using text-mining. We process information at the fine-grained sentence level using full text when available. In a second project, we investigate the use of these extracted relationships in place of manually curated relationships as input into an algorithm that predicts pharmacogenes for a drug of interest. We show that for this application we can perform as well with text-mined relationships as with manually curated information. This approach holds great promise as it is cheaper, faster, and more scalable than manual curation. Our method provides us with interesting drug-gene relationship predictions that warrant further experimental investigation. In the third project, we describe knowledge inference in the context of pharmacogenomic relationships. Using cutting-edge natural language processing tools and automated reasoning, we create a rich semantic network of 40,000 pharmacogenomic relationships distilled from 17 million Medline abstracts. This network connects over 200 entity types with clear semantics using more than 70 unique types of relationships. We use this network to create collections of precise and specific types of knowledge, and infer relationships not stated explicitly in the text but rather inferred from the large number of related sentences found in the literature. This is exciting because it demonstrates that we are able to overcome the heterogeneity of written language and infer the correct semantics of the relationship described by authors. Finally, we can use this network to identify conflicting facts described in the literature, to study change in language use over time, and to predict drug-drug interactions. These achievements provide us with new ways of interacting with the literature and the knowledge embedded within it, and help ensure that we do not bury the knowledge embodied in the publications, but rather connect the often fragmented and disconnected pieces of knowledge spread across millions of articles in hundreds of journals. We are thereby brought one step closer to the realization of personalized medicine and ensure that as scientists, we continue to build on the knowledge discovered by past generations and truly to stand on the shoulders of giants.
