Impacts of Molecular Structure on Nucleic Acid-Protein Interactions

Impacts of Molecular Structure on Nucleic Acid-Protein Interactions PDF Author: Vaclav Brazda
Publisher: Mdpi AG
ISBN: 9783036574455
Category : Science
Languages : en
Pages : 0

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Book Description
Interactions between nucleic acids and proteins are essential requirements for the viability of cellular life because they are indispensable for many basic biological processes. DNA is typically presented as a specific double-stranded helical structure, but nucleic acids have great structural flexibility. Current knowledge demonstrates that the structural conformations of nucleic acids play critical roles in protein-DNA interactions. This book presents a collection of research findings published in the Special Issue of the International Journal of Molecular Sciences, titled "Impacts of Molecular Structure on Nucleic Acid-Protein Interactions". The breadth of research findings reported here demonstrates that the structural flexibility of nucleic acids plays critical roles in their interactions with proteins, with important implications across a range of human diseases, including cancer and some infectious diseases. Prof. Richard Bowater University of East Anglia, Norwich, United Kingdom Prof. Václav Brázda Institute of Biophysics of the Czech Academy of Sciences, Brno, Czech Republic

Impacts of Molecular Structure on Nucleic Acid-Protein Interactions

Impacts of Molecular Structure on Nucleic Acid-Protein Interactions PDF Author: Vaclav Brazda
Publisher: Mdpi AG
ISBN: 9783036574455
Category : Science
Languages : en
Pages : 0

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Book Description
Interactions between nucleic acids and proteins are essential requirements for the viability of cellular life because they are indispensable for many basic biological processes. DNA is typically presented as a specific double-stranded helical structure, but nucleic acids have great structural flexibility. Current knowledge demonstrates that the structural conformations of nucleic acids play critical roles in protein-DNA interactions. This book presents a collection of research findings published in the Special Issue of the International Journal of Molecular Sciences, titled "Impacts of Molecular Structure on Nucleic Acid-Protein Interactions". The breadth of research findings reported here demonstrates that the structural flexibility of nucleic acids plays critical roles in their interactions with proteins, with important implications across a range of human diseases, including cancer and some infectious diseases. Prof. Richard Bowater University of East Anglia, Norwich, United Kingdom Prof. Václav Brázda Institute of Biophysics of the Czech Academy of Sciences, Brno, Czech Republic

Protein-Nucleic Acid Interactions

Protein-Nucleic Acid Interactions PDF Author: Phoebe A. Rice
Publisher: Royal Society of Chemistry
ISBN: 0854042725
Category : Science
Languages : en
Pages : 417

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Book Description
This book provides both in-depth background and up-to-date information in this area. The chapters are organized by general themes and principles, written by experts who illustrate topics with current findings. Topics covered include: - the role of ions and hydration in protein-nucleic acid interactions - transcription factors and combinatorial specificity - indirect readout of DNA sequence - single-stranded nucleic acid binding proteins - nucleic acid junctions and proteins, - RNA protein recognition - recognition of DNA damage. It will be a key reference for both advanced students and established scientists wishing to broaden their horizons.

Protein-nucleic Acid Interaction

Protein-nucleic Acid Interaction PDF Author: Wolfram Saenger
Publisher:
ISBN:
Category : Science
Languages : en
Pages : 230

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Book Description
This volume contains a series of essays which describe a range of problems in the field of nucleic-acid interactions, investigated by a variety of techniques. An introductory chapter on DNA-protein interactions in the regulation of gene expression is followed by papers on selected model systems.

Nucleic Acids and Molecular Biology

Nucleic Acids and Molecular Biology PDF Author: Fritz Eckstein
Publisher: Springer Science & Business Media
ISBN: 3642786669
Category : Science
Languages : en
Pages : 341

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Book Description
Molecular biology is one of the most rapidly developing and at the same time most exciting disciplines. The key to molecular biology lies in the understanding of nucleic acids - their structure, function, and interaction with proteins. Nucleic Acids and Molecular Biology keeps scientists informed of the explosively growing information and complies with the great interest in this field by offering a continued high standard of review. A substantial part of this volume has been devoted to the analysis of different aspects of nucleic acid-protein-interactions including RNA-protein-interaction.

Biophysics of DNA-Protein Interactions

Biophysics of DNA-Protein Interactions PDF Author: Mark C. Williams
Publisher: Springer Science & Business Media
ISBN: 0387928081
Category : Science
Languages : en
Pages : 354

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Book Description
Depite the rapid expansion of the field of biophysics, there are very few books that comprehensively treat specific topics in this area. Recently, the field of single molecule biophysics has developed very quickly, and a few books specifically treating single molecule methods are beginning to appear. However, the promise of single molecule biophysics is to contribute to the understanding of specific fields of biology using new methods. This book would focus on the specific topic of the biophysics of DNA-protein interactions, and would include the use of new approaches, including both bulk methods as well as single molecule methods. This would make the book attractive to anyone working in the general area of DNA-protein interactions, which is of course a much wider market than just single molecule biophysicists or even biophysicists. The subject of the book will be the biophysics of DNA-protein interactions, and will include new methods and results that describe the physical mechanism by which proteins interact with DNA. For example, there has been much recent work on the mechanism by which proteins search for specific binding sites on DNA. A few chapters will be devoted to experiments and theory that shed light on this important problem. We will also cover proteins that alter DNA properties to facilitate interactions important for transcription or replication. Another section of the book will cover the biophysical mechanism by which motor proteins interact with DNA. Finally, we will cover larger protein-DNA complexes, such as replication forks, recombination complexes, DNA repair interactions, and their chromatin context.

Structural Studies of Protein-Nucleic Acid Interaction

Structural Studies of Protein-Nucleic Acid Interaction PDF Author: Thomas A. Steitz
Publisher: CUP Archive
ISBN: 9780521414890
Category : Science
Languages : en
Pages : 108

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Book Description
In this 1993 text, Nobel Prize winner Professor Steitz reviews the wide-ranging research in structural studies of DNA-binding proteins and their complexes with DNA. The author clearly and concisely describes the uses of techniques in molecular genetics, DNA synthesis, protein crystallography and nuclear magnetic response.

Molecular Biology of The Cell

Molecular Biology of The Cell PDF Author: Bruce Alberts
Publisher:
ISBN: 9780815332183
Category : Cytology
Languages : en
Pages : 0

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Book Description


Nucleic Acids and Molecular Biology

Nucleic Acids and Molecular Biology PDF Author: Fritz Eckstein Eckstein
Publisher: Springer Science & Business Media
ISBN: 3642794882
Category : Science
Languages : en
Pages : 387

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Book Description
Molecular biology is one of the most rapidly developing and at the same time most exciting disciplines. The key to molecular biology lies in the understanding of nucleic acids - their structure, function, and interaction with proteins. Nucleic Acids and Molecular Biology keeps scientists informed of the explosively growing information and complies with the great interest in this field by offering a continued high standard of review. A substantial part of this volume has been devoted to the analysis of different aspects of nucleic acid-protein-interactions including RNA-protein-interaction.

DNA'Protein Interactions

DNA'Protein Interactions PDF Author: G. Geoff Kneale
Publisher: Springer Science & Business Media
ISBN: 1592595170
Category : Science
Languages : en
Pages : 428

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Book Description
The study of protein-nucleic acid interactions is currently one of the most rapidly growing areas of molecular biology. DNA binding proteins are at the very heart of the regulation and control of gene expression, replication, and recombination: Enzymes that recognize and either modify or cleave specific DNA sequences are equally important to the cell. Some of the techniques reported in this volume can be used to identify previously unknown DNA binding proteins from crude cell extracts. Virtually all are capable of giving direct information on the molecular basis of the interaction—the location of the DNA binding site; the strength and specificity of binding; the identities of individual groups on specific bases involved in binding; the specific amino acid residues of the protein that interact with the DNA; or the effects of protein binding on gross conformation and local structure of DNA. The recognition of DNA sequences by proteins is a complex phenomenon, involving specific hydrogen bonding contacts to the DNA bases ("direct readout") and/or interactions with the sugar-phos phate backbone ("indirect readout"). The latter interactions can also be highly specific because of sequence-dependent conformational changes in the DNA. In addition, intercalation of planar aromatic amino acid side-chains between the DNA bases can occur, most notably with single-stranded DNA binding proteins. Furthermore, when bound, many DNA binding proteins induce drastic structural changes in the DNA as an integral part of their function.

Nucleic Acid Structure

Nucleic Acid Structure PDF Author: W. Guschlbauer
Publisher: Springer
ISBN:
Category : Science
Languages : en
Pages : 170

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Book Description
Methods and techniques. Chemistry and enzymology of nucleic acids. Structure and function of DNA. Physical chemistry of DNA - the problems of DNA research. Model systems for nucleic acids. Errors and mutations. The structure of ribonucleic acids. Nucleic acid - protein interactions.