Genomic Approaches in Earth and Environmental Sciences

Genomic Approaches in Earth and Environmental Sciences PDF Author: Gregory Dick
Publisher: John Wiley & Sons
ISBN: 1118708202
Category : Science
Languages : en
Pages : 179

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Book Description
The first comprehensive synthesis of genomic techniques in earth sciences The past 15 years have witnessed an explosion of DNA sequencing technologies that provide unprecedented insights into biology. Although this technological revolution has been driven by the biomedical sciences, it also offers extraordinary opportunities in the earth and environmental sciences. In particular, the application of "omics" methods (genomics, transcriptomics, proteomics) directly to environmental samples offers exciting new vistas of complex microbial communities and their roles in environmental and geochemical processes. This unique book fills the gap where there exists a lack of resources and infrastructure to educate and train geoscientists about the opportunities, approaches, and analytical methods available in the application of omic technologies to problems in the geosciences. Genomic Approaches in Earth and Environmental Sciences begins by covering the role of microorganisms in earth and environmental processes. It then goes on to discuss how omics approaches provide new windows into geobiological processes. It delves into the DNA sequencing revolution and the impact that genomics has made on the geosciences. The book then discusses the methods used in the field, beginning with an overview of current technologies. After that it offers in-depth coverage of single cell genomics, metagenomics, metatranscriptomics, metaproteomics, and functional approaches, before finishing up with an outlook on the future of the field. The very first synthesis of an important new family of techniques Shows strengths and limitations (both practical and theoretical) of the techniques Deals with both theoretical and laboratory basics Shows use of techniques in a variety of applications, including various aspects of environmental science, geobiology, and evolution Genomic Approaches in Earth and Environmental Sciences is a welcome addition to the library of all earth and environmental scientists and students working within a wide range of subdisciplines.

Genomic Approaches in Earth and Environmental Sciences

Genomic Approaches in Earth and Environmental Sciences PDF Author: Gregory Dick
Publisher: John Wiley & Sons
ISBN: 1118708202
Category : Science
Languages : en
Pages : 179

Get Book Here

Book Description
The first comprehensive synthesis of genomic techniques in earth sciences The past 15 years have witnessed an explosion of DNA sequencing technologies that provide unprecedented insights into biology. Although this technological revolution has been driven by the biomedical sciences, it also offers extraordinary opportunities in the earth and environmental sciences. In particular, the application of "omics" methods (genomics, transcriptomics, proteomics) directly to environmental samples offers exciting new vistas of complex microbial communities and their roles in environmental and geochemical processes. This unique book fills the gap where there exists a lack of resources and infrastructure to educate and train geoscientists about the opportunities, approaches, and analytical methods available in the application of omic technologies to problems in the geosciences. Genomic Approaches in Earth and Environmental Sciences begins by covering the role of microorganisms in earth and environmental processes. It then goes on to discuss how omics approaches provide new windows into geobiological processes. It delves into the DNA sequencing revolution and the impact that genomics has made on the geosciences. The book then discusses the methods used in the field, beginning with an overview of current technologies. After that it offers in-depth coverage of single cell genomics, metagenomics, metatranscriptomics, metaproteomics, and functional approaches, before finishing up with an outlook on the future of the field. The very first synthesis of an important new family of techniques Shows strengths and limitations (both practical and theoretical) of the techniques Deals with both theoretical and laboratory basics Shows use of techniques in a variety of applications, including various aspects of environmental science, geobiology, and evolution Genomic Approaches in Earth and Environmental Sciences is a welcome addition to the library of all earth and environmental scientists and students working within a wide range of subdisciplines.

Genomic Approaches in Earth and Environmental Sciences

Genomic Approaches in Earth and Environmental Sciences PDF Author: Gregory Dick
Publisher: John Wiley & Sons
ISBN: 1118708261
Category : Science
Languages : en
Pages : 206

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Book Description
The first comprehensive synthesis of genomic techniques in earth sciences The past 15 years have witnessed an explosion of DNA sequencing technologies that provide unprecedented insights into biology. Although this technological revolution has been driven by the biomedical sciences, it also offers extraordinary opportunities in the earth and environmental sciences. In particular, the application of "omics" methods (genomics, transcriptomics, proteomics) directly to environmental samples offers exciting new vistas of complex microbial communities and their roles in environmental and geochemical processes. This unique book fills the gap where there exists a lack of resources and infrastructure to educate and train geoscientists about the opportunities, approaches, and analytical methods available in the application of omic technologies to problems in the geosciences. Genomic Approaches in Earth and Environmental Sciences begins by covering the role of microorganisms in earth and environmental processes. It then goes on to discuss how omics approaches provide new windows into geobiological processes. It delves into the DNA sequencing revolution and the impact that genomics has made on the geosciences. The book then discusses the methods used in the field, beginning with an overview of current technologies. After that it offers in-depth coverage of single cell genomics, metagenomics, metatranscriptomics, metaproteomics, and functional approaches, before finishing up with an outlook on the future of the field. The very first synthesis of an important new family of techniques Shows strengths and limitations (both practical and theoretical) of the techniques Deals with both theoretical and laboratory basics Shows use of techniques in a variety of applications, including various aspects of environmental science, geobiology, and evolution Genomic Approaches in Earth and Environmental Sciences is a welcome addition to the library of all earth and environmental scientists and students working within a wide range of subdisciplines.

Earth and Environmental Sciences

Earth and Environmental Sciences PDF Author: Imran Ahmad Dar
Publisher: BoD – Books on Demand
ISBN: 953307468X
Category : Science
Languages : en
Pages : 648

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Book Description
We are increasingly faced with environmental problems and required to make important decisions. In many cases an understanding of one or more geologic processes is essential to finding the appropriate solution. Earth and Environmental Sciences are by their very nature a dynamic field in which new issues continue to arise and old ones often evolve. The principal aim of this book is to present the reader with a broad overview of Earth and Environmental Sciences. Hopefully, this recent research will provide the reader with a useful foundation for discussing and evaluating specific environmental issues, as well as for developing ideas for problem solving. The book has been divided into nine sections; Geology, Geochemistry, Seismology, Hydrology, Hydrogeology, Mineralogy, Soil, Remote Sensing and Environmental Sciences.

Boron Proxies in Paleoceanography and Paleoclimatology

Boron Proxies in Paleoceanography and Paleoclimatology PDF Author: Bärbel Hönisch
Publisher: John Wiley & Sons
ISBN: 1119010640
Category : Science
Languages : en
Pages : 245

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Book Description
Anthropogenic carbon dioxide emissions do not only warm our planet but also acidify our oceans. It is currently unclear to which degree Earth’s climate and marine life will be impacted by these changes but information from Earth history, particularly the geochemical signals of past environmental changes stored in the fossil remains of marine organisms, can help us predict possible future changes. This book aims to be a primer for scientists who seek to apply boron proxies in marine carbonates to estimate past seawater carbonate chemistry and atmospheric pCO2. Boron proxies (δ11B and B/Ca) were introduced nearly three decades ago, with subsequent strides being made in understanding their mechanistic functioning. This text reviews current knowledge about the aqueous systematics, the inorganic and biological controls on boron isotope fractionation and incorporation into marine carbonates, as well as the analytical techniques for measurement of boron proxies. Laboratory and field calibrations of the boron proxies are summarized, and similarities between modern calibrations are explored to suggest estimates for proxy sensitivities in marine calcifiers that are now extinct. Example applications illustrate the potential for reconstructing paleo-atmospheric pCO2 from boron isotopes. Also explored are the sensitivity of paleo-ocean acidity and pCO2 reconstructions to boron isotope proxy systematics that are currently less well understood, including the elemental and boron isotopic composition of seawater through time, seawater alkalinity, temperature and salinity, and their collective impact on the uncertainty of paleo-reconstructions. The B/Ca proxy is based on the same mechanistic principles as the boron isotope proxy, but empirical calibrations suggest seawater pH is not the only controlling factor. B/Ca therefore has the potential to provide a second carbonate parameter that could be paired with δ11B to fully constrain the ocean carbonate system, but the associated uncertainties are large. This text reviews and examines what is currently known about the B/Ca proxy systematics. As more scientists embark on characterizing past ocean acidity and atmospheric pCO2, Boron in Paleoceanography and Paleoclimatology provides a resource to introduce geoscientists to the opportunities and complications of boron proxies, including potential avenues to further refine them.

Deep Carbon

Deep Carbon PDF Author: Beth N. Orcutt
Publisher: Cambridge University Press
ISBN: 1108477496
Category : Nature
Languages : en
Pages : 687

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Book Description
A comprehensive guide to carbon inside Earth - its quantities, movements, forms, origins, changes over time and impact on planetary processes. This title is also available as Open Access on Cambridge Core.

Environmental Genomics

Environmental Genomics PDF Author: C. Cristofre Martin
Publisher: Springer Science & Business Media
ISBN: 1588297772
Category : Science
Languages : en
Pages : 363

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Book Description
Here is a manual for an environmental scientist who wishes to embrace genomics to answer environmental questions. The volume covers: gene expression profiling, whole genome and chromosome mutation detection, and methods to assay genome diversity and polymorphisms within a particular environment. This book provides a systematic framework for determining environmental impact and ensuring human health and the sustainability of natural populations.

Ecological Genomics

Ecological Genomics PDF Author: Christian R. Landry
Publisher: Springer Science & Business Media
ISBN: 9400773471
Category : Science
Languages : en
Pages : 358

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Book Description
Researchers in the field of ecological genomics aim to determine how a genome or a population of genomes interacts with its environment across ecological and evolutionary timescales. Ecological genomics is trans-disciplinary by nature. Ecologists have turned to genomics to be able to elucidate the mechanistic bases of the biodiversity their research tries to understand. Genomicists have turned to ecology in order to better explain the functional cellular and molecular variation they observed in their model organisms. We provide an advanced-level book that covers this recent research and proposes future development for this field. A synthesis of the field of ecological genomics emerges from this volume. Ecological Genomics covers a wide array of organisms (microbes, plants and animals) in order to be able to identify central concepts that motivate and derive from recent investigations in different branches of the tree of life. Ecological Genomics covers 3 fields of research that have most benefited from the recent technological and conceptual developments in the field of ecological genomics: the study of life-history evolution and its impact of genome architectures; the study of the genomic bases of phenotypic plasticity and the study of the genomic bases of adaptation and speciation.

Molecular Geomicrobiology

Molecular Geomicrobiology PDF Author: Jillian F. Banfield
Publisher: Walter de Gruyter GmbH & Co KG
ISBN: 1501509551
Category : Science
Languages : en
Pages : 308

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Book Description
Volume 59 of Reviews in Mineralogy and Geochemistry ties together themes common to environmental microbiology, earth science, and astrobiology. The resesarch presented here, the associated short course, and the volume production were supported by funding from many sources, notably the Mineralogical Society of America, the Geochemical Society, the US Department of Energy Chemical Sciences Program and the NASA Astrobiology Institute.

Privacy Preservation of Genomic and Medical Data

Privacy Preservation of Genomic and Medical Data PDF Author: Amit Kumar Tyagi
Publisher: John Wiley & Sons
ISBN: 1394213700
Category : Computers
Languages : en
Pages : 432

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Book Description
PRIVACY PRESERVATION of GENOMIC and MEDICAL DATA Discusses topics concerning the privacy preservation of genomic data in the digital era, including data security, data standards, and privacy laws so that researchers in biomedical informatics, computer privacy and ELSI can assess the latest advances in privacy-preserving techniques for the protection of human genomic data. Privacy Preservation of Genomic and Medical Data focuses on genomic data sources, analytical tools, and the importance of privacy preservation. Topics discussed include tensor flow and Bio-Weka, privacy laws, HIPAA, and other emerging technologies like Internet of Things, IoT-based cloud environments, cloud computing, edge computing, and blockchain technology for smart applications. The book starts with an introduction to genomes, genomics, genetics, transcriptomes, proteomes, and other basic concepts of modern molecular biology. DNA sequencing methodology, DNA-binding proteins, and other related terms concerning genomes and genetics, and the privacy issues are discussed in detail. The book also focuses on genomic data sources, analyzing tools, and the importance of privacy preservation. It concludes with future predictions for genomic and genomic privacy, emerging technologies, and applications. Audience Researchers in information technology, data mining, health informatics and health technologies, clinical informatics, bioinformatics, security and privacy in healthcare, as well as health policy developers in public and private health departments and public health.

The New Science of Metagenomics

The New Science of Metagenomics PDF Author: National Research Council
Publisher: National Academies Press
ISBN: 0309106761
Category : Science
Languages : en
Pages : 170

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Book Description
Although we can't usually see them, microbes are essential for every part of human life-indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying-one at a time-the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.