Extracellular Enzymes in Aquatic Environments: Exploring the Link Between Genomic Potential and Biogeochemical Consequences PDF Download
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Author: Maria Montserrat Sala
Publisher: Frontiers Media SA
ISBN: 2889630048
Category :
Languages : en
Pages : 159
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Book Description
Microbial extracellular enzymes are fundamental to the cycling of elements in aquatic systems. The regulation of these enzymatic reactions in oceans, lakes and streams is under complex multiple control by environmental factors and the metabolic capacities of different taxa and communities. While the environmental control of enzyme-mediated processes has been investigated for over 100 years, in recent years tremendous progress in techniques to characterize the metabolic potential of microbial communities (“omics” techniques) has been made, such as high-throughput sequencing and new analytical algorithms. This book explores the controls, activities, and biogeochemical consequences of enzymes in aquatic environments. It brings together experimental studies and fieldwork conducted with natural microbial communities in marine and freshwater ecosystems as well as physiological, biochemical and molecular studies on microbial communities in these environments, or species isolated from them. Additionally, the book contributes to the ongoing debate on the impact of anthropogenic climate change and pollution on microbes, extracellular enzymes and substrate turnover.
Author: Maria Montserrat Sala
Publisher: Frontiers Media SA
ISBN: 2889630048
Category :
Languages : en
Pages : 159
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Book Description
Microbial extracellular enzymes are fundamental to the cycling of elements in aquatic systems. The regulation of these enzymatic reactions in oceans, lakes and streams is under complex multiple control by environmental factors and the metabolic capacities of different taxa and communities. While the environmental control of enzyme-mediated processes has been investigated for over 100 years, in recent years tremendous progress in techniques to characterize the metabolic potential of microbial communities (“omics” techniques) has been made, such as high-throughput sequencing and new analytical algorithms. This book explores the controls, activities, and biogeochemical consequences of enzymes in aquatic environments. It brings together experimental studies and fieldwork conducted with natural microbial communities in marine and freshwater ecosystems as well as physiological, biochemical and molecular studies on microbial communities in these environments, or species isolated from them. Additionally, the book contributes to the ongoing debate on the impact of anthropogenic climate change and pollution on microbes, extracellular enzymes and substrate turnover.
Author: Lesley Clementson
Publisher: Elsevier
ISBN: 0128230290
Category : Science
Languages : en
Pages : 614
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Book Description
Phytoplankton ecology has developed from an understanding of taxonomy, species dynamics and functional roles, and species interactions with the surrounding environment. New and emerging technologies enable a paradigm shift in the ways we monitor and understand phytoplankton in a range of environments. Advances in Phytoplankton Ecology: Applications of Emerging Technologies is a practical guide to these new technologies and explores their application with case studies to show how recent advances have changed our understanding of phytoplankton ecology.Part one of this book explores how traditional taxonomy and species identification has changed, moving from morphological to molecular techniques. Part two explores the new technologies for remote and automatic monitoring and sensor technology and applications for management. Part three explores the explosion of omics techniques and their application in species identification, functional populations, trait characterization, interspecific interactions, and interaction with their environment.This book is an invaluable guide for marine and freshwater ecology researchers to how new technologies can enhance our understanding of ecology. - Combines traditional techniques with new technologies and methods - Explores the influence of new technology on our understanding of phytoplankton ecology - Provides practical applications of each technique through case studies in each chapter
Author: Naga Raju Maddela
Publisher: Springer Nature
ISBN: 9811901554
Category : Science
Languages : en
Pages : 451
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Book Description
This contributed volume compiles the latest developments in the field of microbial enzymology. It focuses on topics such as distribution of microbial enzymes in natural habitats, microbial enzymes in environmental sustainability, and environmental disturbances on microbial enzymes, which are organized into three parts, respectively. Ranging from micro-scale studies to macro, it covers a huge domain of microbial enzymes and their interplay between the components of the environment. Overall, the book portrays the importance of microbial enzyme technology and its role in solving the problems in modern-day life. The book is a ready reference for practicing students and researchers in environmental engineering, chemical engineering, agricultural engineering, and other allied fields.
Author: Binod Parameswaran
Publisher: Springer
ISBN: 9811332630
Category : Technology & Engineering
Languages : en
Pages : 451
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Book Description
This volume discusses recent advancements to the age old practice of using microbial enzymes in the preparation of food. Written by leading experts in the field, it discusses novel enzymes and their applications in the industrial preparation of food to improve taste and texture, while reducing cost and increasing consistency. This book will be of interest to both researchers and students working in food technology.
Author: K. Ramesh Reddy
Publisher: CRC Press
ISBN: 0429531931
Category : Science
Languages : en
Pages : 926
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Book Description
The globally important nature of wetland ecosystems has led to their increased protection and restoration as well as their use in engineered systems. Underpinning the beneficial functions of wetlands are a unique suite of physical, chemical, and biological processes that regulate elemental cycling in soils and the water column. This book provides an in-depth coverage of these wetland biogeochemical processes related to the cycling of macroelements including carbon, nitrogen, phosphorus, and sulfur, secondary and trace elements, and toxic organic compounds. In this synthesis, the authors combine more than 100 years of experience studying wetlands and biogeochemistry to look inside the black box of elemental transformations in wetland ecosystems. This new edition is updated throughout to include more topics and provide an integrated view of the coupled nature of biogeochemical cycles in wetland systems. The influence of the elemental cycles is discussed at a range of scales in the context of environmental change including climate, sea level rise, and water quality. Frequent examples of key methods and major case studies are also included to help the reader extend the basic theories for application in their own system. Some of the major topics discussed are: Flooded soil and sediment characteristics Aerobic-anaerobic interfaces Redox chemistry in flooded soil and sediment systems Anaerobic microbial metabolism Plant adaptations to reducing conditions Regulators of organic matter decomposition and accretion Major nutrient sources and sinks Greenhouse gas production and emission Elemental flux processes Remediation of contaminated soils and sediments Coupled C-N-P-S processes Consequences of environmental change in wetlands# The book provides the foundation for a basic understanding of key biogeochemical processes and its applications to solve real world problems. It is detailed, but also assists the reader with box inserts, artfully designed diagrams, and summary tables all supported by numerous current references. This book is an excellent resource for senior undergraduates and graduate students studying ecosystem biogeochemistry with a focus in wetlands and aquatic systems.
Author: Andreas Teske
Publisher: Frontiers Media SA
ISBN: 2889195368
Category : Microbiology
Languages : en
Pages : 305
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Book Description
Deep subsurface microbiology is a highly active and rapidly advancing research field at the interface of microbiology and the geosciences; it focuses on the detection, identification, quantification, cultivation and activity measurements of bacteria, archaea and eukaryotes that permeate the subsurface biosphere of deep marine sediments and the basaltic ocean and continental crust. The deep subsurface biosphere abounds with uncultured, only recently discovered and – at best - incompletely understood microbial populations. In spatial extent and volume, Earth's subsurface biosphere is only rivaled by the deep sea water column. So far, no deep subsurface sediment has been found that is entirely devoid of microbial life; microbial cells and DNA remain detectable at sediment depths of more than 1 km; microbial life permeates deeply buried hydrocarbon reservoirs, and is also found several kilometers down in continental crust aquifers. Severe energy limitation, either as electron acceptor or donor shortage, and scarcity of microbially degradable organic carbon sources are among the evolutionary pressures that have shaped the genomic and physiological repertoire of the deep subsurface biosphere. Its biogeochemical role as long-term organic carbon repository, inorganic electron and energy source, and subduction recycling engine continues to be explored by current research at the interface of microbiology, geochemistry and biosphere/geosphere evolution. This Research Topic addresses some of the central research questions about deep subsurface microbiology and biogeochemistry: phylogenetic and physiological microbial diversity in the deep subsurface; microbial activity and survival strategies in severely energy-limited subsurface habitats; microbial activity as reflected in process rates and gene expression patterns; biogeographic isolation and connectivity in deep subsurface microbial communities; the ecological standing of subsurface biospheres in comparison to the surface biosphere – an independently flourishing biosphere, or mere survivors that tolerate burial (along with organic carbon compounds), or a combination of both? Advancing these questions on Earth’s deep subsurface biosphere redefines the habitat range, environmental tolerance, activity and diversity of microbial life.
Author: Thomas S. Bianchi
Publisher: Princeton University Press
ISBN: 1400839106
Category : Science
Languages : en
Pages : 417
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Book Description
This textbook provides a unique and thorough look at the application of chemical biomarkers to aquatic ecosystems. Defining a chemical biomarker as a compound that can be linked to particular sources of organic matter identified in the sediment record, the book indicates that the application of these biomarkers for an understanding of aquatic ecosystems consists of a biogeochemical approach that has been quite successful but underused. This book offers a wide-ranging guide to the broad diversity of these chemical biomarkers, is the first to be structured around the compounds themselves, and examines them in a connected and comprehensive way. This timely book is appropriate for advanced undergraduate and graduate students seeking training in this area; researchers in biochemistry, organic geochemistry, and biogeochemistry; researchers working on aspects of organic cycling in aquatic ecosystems; and paleoceanographers, petroleum geologists, and ecologists. Provides a guide to the broad diversity of chemical biomarkers in aquatic environments The first textbook to be structured around the compounds themselves Describes the structure, biochemical synthesis, analysis, and reactivity of each class of biomarkers Offers a selection of relevant applications to aquatic systems, including lakes, rivers, estuaries, oceans, and paleoenvironments Demonstrates the utility of using organic molecules as tracers of processes occurring in aquatic ecosystems, both modern and ancient
Author: Ryszard J. Chrost
Publisher: Springer Science & Business Media
ISBN: 146123090X
Category : Science
Languages : en
Pages : 333
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Book Description
Organic matter in aquatic environments consists mostly of large compounds which cannot be taken up and utilized directly by microbial cells. Prior to incorporation, polymeric materials undergo degradation by cell-bound and extracellular enzymes produced by these microbes; in fact, such enzymatic mobilization and transformation is the key process which regulates the turnover of organic as well as inorganic compounds in aquatic environments. This volume brings together studies on enzymatic degradation processes from disciplines as diverse as water and sediment research, bacterial and algal aquatic ecophysiology, eutrophication, and nutrient cycling and biogeochemistry, in both freshwater and marine ecosystems. Its scope extends from fundamental research exploring the contribution of microbial enzymatic processes to whole ecosystem functioning to practical applications in water biotechnology. The first comprehensive publication providing an overview of this emerging field of enzymology, Microbial Enzymes in Aquatic Environments will be of great interest to ecologists and microbiologists alike.
Author: E. B. Gareth Jones
Publisher: Walter de Gruyter GmbH & Co KG
ISBN: 3110333481
Category : Science
Languages : en
Pages : 518
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Book Description
The available literature on freshwater fungi is limited. Over the subsequent years a considerable volume of scientific papers have appeared scattered throughout numerous journals. There is therefore no recent synthesis of the subject and this is the objective of the proposed book. Freshwater habitats are rich in fungi with some 3,000 described species, most of papers focussing on their identification, substrata they grow on and world distribution. However, these fungi play an important role in the freshwater ecosystem, and are primarily involved in the breakdown of leaf litter contributing food for detritus feeders. Our book will bring together a wide range of acclaimed mycologists to review recent developments on the biology and ecology of freshwater fungi, particularly their molecular phylogeny, biodiversity, causative diseases of freshwater amphibians, fishes and invertebrate animals, decomposition of leaf litter, stream pollution and their potential role in bioremediation.
Author: Richard G. Burns
Publisher: CRC Press
ISBN: 0824744209
Category : Science
Languages : en
Pages : 740
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Book Description
The need to understand the biological processes that are important for essential aquatic and terrestrial ecosystem function has prompted much research into the field of ecological enzymology. This book presents the two broad areas of application in a compilation of reviews by 21 international experts in their respective fields. The first explores enzymatic activities to assess the processes or mechanisms that operate in a given system, such as the rhizosphere, plant leaves and shoots, soil surfaces, and biofilms. The second considers enzymes or microbial cells as sensors to detect microbial activity and stresses due to pollution, management, or climatic change in both aquatic and terrestrial ecosystems.
