Author: Russ B Altman
Publisher: World Scientific
ISBN: 9814571393
Category :
Languages : en
Pages : 704
Book Description
The Pacific Symposium on Biocomputing brings together key researchers from the international biocomputing community. It is designed to be maximally responsive to the need for critical mass in subdisciplines within biocomputing. This book contains peer-reviewed articles in computational biology.
Biocomputing 2000 - Proceedings Of The Pacific Symposium
Computational Methods in Systems Biology
Author: Vincent Danos
Publisher: Springer Science & Business Media
ISBN: 3540253750
Category : Computers
Languages : en
Pages : 288
Book Description
The Computational Methods in Systems Biology (CMSB) workshop series was established in 2003 by Corrado Priami. The purpose of the workshop series is to help catalyze the convergence between computer scientists interested in language design, concurrency theory, software engineering or program verification, and physicists, mathematicians and biologists interested in the systems-level understanding of cellular processes. Systems biology was perceived as being increasingly in search of sophisticated modeling frameworks whether for representing and processing syst- level dynamics or for model analysis, comparison and refinement. One has here a clear-cut case of a must-explore field of application for the formal methods developed in computer science in the last decade. This proceedings consists of papers from the CMSB 2003 workshop. A good third of the 24 papers published here have a distinct formal methods origin; we take this as a confirmation that a synergy is building that will help solidify CMSB as a forum for cross-community exchange, thereby opening new theoretical avenues and making the field less of a potential application and more of a real one. Publication in Springer's new Lecture Notes in Bioinformatics (LNBI) offers particular visibility and impact, which we gratefully acknowledge. Our keynote speakers, Alfonso Valencia and Trey Ideker, gave challenging and somewhat humbling lectures: they made it clear that strong applications to systems biology are still some way ahead. We thank them all the more for accepting the invitation to speak and for the clarity and excitement they brought to the conference.
Publisher: Springer Science & Business Media
ISBN: 3540253750
Category : Computers
Languages : en
Pages : 288
Book Description
The Computational Methods in Systems Biology (CMSB) workshop series was established in 2003 by Corrado Priami. The purpose of the workshop series is to help catalyze the convergence between computer scientists interested in language design, concurrency theory, software engineering or program verification, and physicists, mathematicians and biologists interested in the systems-level understanding of cellular processes. Systems biology was perceived as being increasingly in search of sophisticated modeling frameworks whether for representing and processing syst- level dynamics or for model analysis, comparison and refinement. One has here a clear-cut case of a must-explore field of application for the formal methods developed in computer science in the last decade. This proceedings consists of papers from the CMSB 2003 workshop. A good third of the 24 papers published here have a distinct formal methods origin; we take this as a confirmation that a synergy is building that will help solidify CMSB as a forum for cross-community exchange, thereby opening new theoretical avenues and making the field less of a potential application and more of a real one. Publication in Springer's new Lecture Notes in Bioinformatics (LNBI) offers particular visibility and impact, which we gratefully acknowledge. Our keynote speakers, Alfonso Valencia and Trey Ideker, gave challenging and somewhat humbling lectures: they made it clear that strong applications to systems biology are still some way ahead. We thank them all the more for accepting the invitation to speak and for the clarity and excitement they brought to the conference.
Advances in Knowledge Discovery and Data Mining
Author: Kyu-Young Whang
Publisher: Springer Science & Business Media
ISBN: 3540047603
Category : Business & Economics
Languages : en
Pages : 629
Book Description
This book constitutes the refereed proceedings of the 7th Pacific-Asia Conference on Knowledge Discovery and Data Mining, PAKDD 2003, held in Seoul, Korea in April/Mai 2003. The 38 revised full papers and 20 revised short papers presented together with two invited industrial contributions were carefully reviewed and selected from 215 submissions. The papers are presented in topical sections on stream mining, graph mining, clustering, text mining, Bayesian networks, association rules, semi-structured data mining, classification, data analysis, and feature selection.
Publisher: Springer Science & Business Media
ISBN: 3540047603
Category : Business & Economics
Languages : en
Pages : 629
Book Description
This book constitutes the refereed proceedings of the 7th Pacific-Asia Conference on Knowledge Discovery and Data Mining, PAKDD 2003, held in Seoul, Korea in April/Mai 2003. The 38 revised full papers and 20 revised short papers presented together with two invited industrial contributions were carefully reviewed and selected from 215 submissions. The papers are presented in topical sections on stream mining, graph mining, clustering, text mining, Bayesian networks, association rules, semi-structured data mining, classification, data analysis, and feature selection.
Handbook of Constraint Programming
Author: Francesca Rossi
Publisher: Elsevier
ISBN: 0080463800
Category : Computers
Languages : en
Pages : 977
Book Description
Constraint programming is a powerful paradigm for solving combinatorial search problems that draws on a wide range of techniques from artificial intelligence, computer science, databases, programming languages, and operations research. Constraint programming is currently applied with success to many domains, such as scheduling, planning, vehicle routing, configuration, networks, and bioinformatics.The aim of this handbook is to capture the full breadth and depth of the constraint programming field and to be encyclopedic in its scope and coverage. While there are several excellent books on constraint programming, such books necessarily focus on the main notions and techniques and cannot cover also extensions, applications, and languages. The handbook gives a reasonably complete coverage of all these lines of work, based on constraint programming, so that a reader can have a rather precise idea of the whole field and its potential. Of course each line of work is dealt with in a survey-like style, where some details may be neglected in favor of coverage. However, the extensive bibliography of each chapter will help the interested readers to find suitable sources for the missing details. Each chapter of the handbook is intended to be a self-contained survey of a topic, and is written by one or more authors who are leading researchers in the area.The intended audience of the handbook is researchers, graduate students, higher-year undergraduates and practitioners who wish to learn about the state-of-the-art in constraint programming. No prior knowledge about the field is necessary to be able to read the chapters and gather useful knowledge. Researchers from other fields should find in this handbook an effective way to learn about constraint programming and to possibly use some of the constraint programming concepts and techniques in their work, thus providing a means for a fruitful cross-fertilization among different research areas.The handbook is organized in two parts. The first part covers the basic foundations of constraint programming, including the history, the notion of constraint propagation, basic search methods, global constraints, tractability and computational complexity, and important issues in modeling a problem as a constraint problem. The second part covers constraint languages and solver, several useful extensions to the basic framework (such as interval constraints, structured domains, and distributed CSPs), and successful application areas for constraint programming.- Covers the whole field of constraint programming- Survey-style chapters- Five chapters on applications
Publisher: Elsevier
ISBN: 0080463800
Category : Computers
Languages : en
Pages : 977
Book Description
Constraint programming is a powerful paradigm for solving combinatorial search problems that draws on a wide range of techniques from artificial intelligence, computer science, databases, programming languages, and operations research. Constraint programming is currently applied with success to many domains, such as scheduling, planning, vehicle routing, configuration, networks, and bioinformatics.The aim of this handbook is to capture the full breadth and depth of the constraint programming field and to be encyclopedic in its scope and coverage. While there are several excellent books on constraint programming, such books necessarily focus on the main notions and techniques and cannot cover also extensions, applications, and languages. The handbook gives a reasonably complete coverage of all these lines of work, based on constraint programming, so that a reader can have a rather precise idea of the whole field and its potential. Of course each line of work is dealt with in a survey-like style, where some details may be neglected in favor of coverage. However, the extensive bibliography of each chapter will help the interested readers to find suitable sources for the missing details. Each chapter of the handbook is intended to be a self-contained survey of a topic, and is written by one or more authors who are leading researchers in the area.The intended audience of the handbook is researchers, graduate students, higher-year undergraduates and practitioners who wish to learn about the state-of-the-art in constraint programming. No prior knowledge about the field is necessary to be able to read the chapters and gather useful knowledge. Researchers from other fields should find in this handbook an effective way to learn about constraint programming and to possibly use some of the constraint programming concepts and techniques in their work, thus providing a means for a fruitful cross-fertilization among different research areas.The handbook is organized in two parts. The first part covers the basic foundations of constraint programming, including the history, the notion of constraint propagation, basic search methods, global constraints, tractability and computational complexity, and important issues in modeling a problem as a constraint problem. The second part covers constraint languages and solver, several useful extensions to the basic framework (such as interval constraints, structured domains, and distributed CSPs), and successful application areas for constraint programming.- Covers the whole field of constraint programming- Survey-style chapters- Five chapters on applications
Active Mining
Author: Hiroshi Motoda
Publisher: IOS Press
ISBN: 9781586032647
Category : Computers
Languages : en
Pages : 306
Book Description
Focusing on data mining, this work is a joint effort from researchers in Japan, and includes a report on the forefront of data collection, user-centred mining and user interaction/reaction. It offers an overview of modern solutions with real-world applications, sharing hard-learned experiences.
Publisher: IOS Press
ISBN: 9781586032647
Category : Computers
Languages : en
Pages : 306
Book Description
Focusing on data mining, this work is a joint effort from researchers in Japan, and includes a report on the forefront of data collection, user-centred mining and user interaction/reaction. It offers an overview of modern solutions with real-world applications, sharing hard-learned experiences.
The Metabolic Pathway Engineering Handbook, Two Volume Set
Author: Christina Smolke
Publisher: CRC Press
ISBN: 1420005626
Category : Medical
Languages : en
Pages : 1247
Book Description
Christina Smolke, who recently developed a novel way to churn out large quantities of drugs from genetically modified brewer's yeast, is regarded as one of the most brilliant minds in biomedical engineering. In this handbook, she brings together pioneering scientists from dozens of disciplines to provide a complete record of accomplishment in metab
Publisher: CRC Press
ISBN: 1420005626
Category : Medical
Languages : en
Pages : 1247
Book Description
Christina Smolke, who recently developed a novel way to churn out large quantities of drugs from genetically modified brewer's yeast, is regarded as one of the most brilliant minds in biomedical engineering. In this handbook, she brings together pioneering scientists from dozens of disciplines to provide a complete record of accomplishment in metab
The Practical Bioinformatician
Author: Limsoon Wong
Publisher: World Scientific
ISBN: 9814482625
Category : Medical
Languages : en
Pages : 539
Book Description
Computer scientists have increasingly been enlisted as “bioinformaticians” to assist molecular biologists in their research. This book is a practical introduction to bioinformatics for these computer scientists. The chapters are in-depth discussions by expert bioinformaticians on both general techniques and specific approaches to a range of selected bioinformatics problems. The book is organized into clusters of chapters on the following topics:• Overview of modern molecular biology and a broad spectrum of techniques from computer science — data mining, machine learning, mathematical modeling, sequence alignment, data integration, workflow development, etc.• In-depth discussion of computational recognition of functional and regulatory sites in DNA sequences.• Incisive discussion of computational prediction of secondary structure of RNA sequences.• Overview of computational prediction of protein cellular localization, and selected discussions of inference of protein function.• Overview of methods for discovering protein-protein interactions.• Detailed discussion of approaches to gene expression analysis for the diagnosis of diseases, the treatment of diseases, and the understanding of gene functions.• Case studies on analysis of phylogenies, functional annotation of proteins, construction of purpose-built integrated biological databases, and development of workflows underlying the large-scale-effort gene discovery.
Publisher: World Scientific
ISBN: 9814482625
Category : Medical
Languages : en
Pages : 539
Book Description
Computer scientists have increasingly been enlisted as “bioinformaticians” to assist molecular biologists in their research. This book is a practical introduction to bioinformatics for these computer scientists. The chapters are in-depth discussions by expert bioinformaticians on both general techniques and specific approaches to a range of selected bioinformatics problems. The book is organized into clusters of chapters on the following topics:• Overview of modern molecular biology and a broad spectrum of techniques from computer science — data mining, machine learning, mathematical modeling, sequence alignment, data integration, workflow development, etc.• In-depth discussion of computational recognition of functional and regulatory sites in DNA sequences.• Incisive discussion of computational prediction of secondary structure of RNA sequences.• Overview of computational prediction of protein cellular localization, and selected discussions of inference of protein function.• Overview of methods for discovering protein-protein interactions.• Detailed discussion of approaches to gene expression analysis for the diagnosis of diseases, the treatment of diseases, and the understanding of gene functions.• Case studies on analysis of phylogenies, functional annotation of proteins, construction of purpose-built integrated biological databases, and development of workflows underlying the large-scale-effort gene discovery.
Applied Biological Engineering
Author: Ganesh R. Naik
Publisher: BoD – Books on Demand
ISBN: 9535104128
Category : Medical
Languages : en
Pages : 678
Book Description
Biological engineering is a field of engineering in which the emphasis is on life and life-sustaining systems. Biological engineering is an emerging discipline that encompasses engineering theory and practice connected to and derived from the science of biology. The most important trend in biological engineering is the dynamic range of scales at which biotechnology is now able to integrate with biological processes. An explosion in micro/nanoscale technology is allowing the manufacture of nanoparticles for drug delivery into cells, miniaturized implantable microsensors for medical diagnostics, and micro-engineered robots for on-board tissue repairs. This book aims to provide an updated overview of the recent developments in biological engineering from diverse aspects and various applications in clinical and experimental research.
Publisher: BoD – Books on Demand
ISBN: 9535104128
Category : Medical
Languages : en
Pages : 678
Book Description
Biological engineering is a field of engineering in which the emphasis is on life and life-sustaining systems. Biological engineering is an emerging discipline that encompasses engineering theory and practice connected to and derived from the science of biology. The most important trend in biological engineering is the dynamic range of scales at which biotechnology is now able to integrate with biological processes. An explosion in micro/nanoscale technology is allowing the manufacture of nanoparticles for drug delivery into cells, miniaturized implantable microsensors for medical diagnostics, and micro-engineered robots for on-board tissue repairs. This book aims to provide an updated overview of the recent developments in biological engineering from diverse aspects and various applications in clinical and experimental research.
Proceedings
Author: IEEE Computer Society
Publisher: IEEE Computer Society Press
ISBN:
Category : Computers
Languages : en
Pages : 830
Book Description
Annotation This proceedings of the July 2002 conference presents new developments in modeling tools for rendering abstract concepts. The 116 papers are arranged into sessions, such as collaborative information visualization environments, animation, curves, the semantic web, and applications in geography and medicine. Topics include a visual query language for large spatial databases, cooperative robot teleoperation through virtual reality interfaces, visualizing temporal features in large-scale microarray time series data, and using bibliographic maps to analyze term distribution in scientific papers. The CD-ROM is an electronic version of the book. No subject index. Annotation copyrighted by Book News, Inc., Portland, OR.
Publisher: IEEE Computer Society Press
ISBN:
Category : Computers
Languages : en
Pages : 830
Book Description
Annotation This proceedings of the July 2002 conference presents new developments in modeling tools for rendering abstract concepts. The 116 papers are arranged into sessions, such as collaborative information visualization environments, animation, curves, the semantic web, and applications in geography and medicine. Topics include a visual query language for large spatial databases, cooperative robot teleoperation through virtual reality interfaces, visualizing temporal features in large-scale microarray time series data, and using bibliographic maps to analyze term distribution in scientific papers. The CD-ROM is an electronic version of the book. No subject index. Annotation copyrighted by Book News, Inc., Portland, OR.
Transactions on Computational Systems Biology VIII
Author: Corrado Priami
Publisher: Springer
ISBN: 3540766391
Category : Computers
Languages : en
Pages : 109
Book Description
The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences. It supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena. The six papers selected for this special issue cover a broad range of topics.
Publisher: Springer
ISBN: 3540766391
Category : Computers
Languages : en
Pages : 109
Book Description
The LNCS journal Transactions on Computational Systems Biology is devoted to inter- and multidisciplinary research in the fields of computer science and life sciences. It supports a paradigmatic shift in the techniques from computer and information science to cope with the new challenges arising from the systems oriented point of view of biological phenomena. The six papers selected for this special issue cover a broad range of topics.