Application-Tailored Accelerated Magnetic Resonance Imaging Methods

Application-Tailored Accelerated Magnetic Resonance Imaging Methods PDF Author: Ziwu Zhou
Publisher:
ISBN:
Category :
Languages : en
Pages : 180

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Book Description
Magnetic resonance imaging (MRI) is a powerful diagnostic medical imaging technique that provides very high spatial resolution. By manipulating the signal evolution through careful imaging sequence design, MRI can generate a wide range of soft-tissue contrast unique to individual application. However, imaging speed remains an issue for many applications. In order to increase scan output without compromising the image quality, the data acquisition and image reconstruction methods need to be designed to fit each application to achieve maximum efficiency. This dissertation concerns several application-tailored accelerated imaging methods through improved sequence design, efficient k-space traverse, as well as tailored image reconstruction algorithm, all together aiming to exploit the full potential of data acquisition and image reconstruction in each application. The first application is ferumoxtyol-enhanced 4D multi-phase cardiovascular MRI on pediatric patients with congenital heart disease. By taking advantage of the high signal-to-noise ratio (SNR) results from contrast enhancement, we introduced two methods to improve the scan efficiency with maintained clinical utility: one with reduced scan time and one with improved temporal resolution. The first method used prospective Poisson-disc under-sampling in combination with graphics processing unit accelerated parallel imaging and compressed sensing combined reconstruction algorithm to reduce scan time by approximately 50% while maintaining highly comparable image quality to un-accelerated acquisition in a clinically practical reconstruction time. The second method utilized a motion weighted reconstruction technique to increase temporal resolution of acquired data, and thus permits improved cardiac functional assessment. Compared with existing acceleration method, the proposed method has nearly three times lower computation burden and six times faster reconstruction speed, all with equal image quality. The second application is noncontrast-enhanced 4D intracranial MR angiography with arterial spin labeling (ASL). Considering the inherently low SNR of ASL signal, we proposed to sample k-space with the efficient golden-angle stack-of-stars trajectory and reconstruct images using compressed sensing with magnitude subtraction as regularization. The acquisition and reconstruction strategy in combination produces images with detailed vascular structures and clean background. At the same time, it allows a reduced temporal blurring delineation of the fine distal arteries when compared with the conventional k-space weighted image contrast (KWIC) reconstruction. Stands upon on this, we further developed an improved stack-of-stars radial sampling strategy for reducing streaking artifacts in general volumetric MRI. By rotating the radial spokes in a golden angle manner along the partition-encoding direction, the aliasing pattern due to under-sampling is modified, resulting in improved image quality for gridding and more advanced reconstruction methods. The third application is low-latency real-time imaging. To achieve sufficient frame rate, real-time MRI typically requires significant k-space under-sampling to accelerate the data acquisition. At the same time, many real-time application, such as interventional MRI, requires user interaction or decision making based on image feedback. Therefore, low-latency on-the-fly reconstruction is highly desirable. We proposed a parallel imaging and convolutional neural network combined image reconstruction framework for low-latency and high quality reconstruction. This is achieved by compacting gradient descent steps resolved from conventional parallel imaging reconstruction as network layers and interleaved with convolutional layers in a general convolutional neural network. Once all parameters of the network are determined during the off-line training process, it can be applied to unseen data with less than 100ms reconstruction time per frame, while more than 1s is usually needed for conventional parallel imaging and compressed sensing combined reconstruction.

Application-Tailored Accelerated Magnetic Resonance Imaging Methods

Application-Tailored Accelerated Magnetic Resonance Imaging Methods PDF Author: Ziwu Zhou
Publisher:
ISBN:
Category :
Languages : en
Pages : 180

Get Book Here

Book Description
Magnetic resonance imaging (MRI) is a powerful diagnostic medical imaging technique that provides very high spatial resolution. By manipulating the signal evolution through careful imaging sequence design, MRI can generate a wide range of soft-tissue contrast unique to individual application. However, imaging speed remains an issue for many applications. In order to increase scan output without compromising the image quality, the data acquisition and image reconstruction methods need to be designed to fit each application to achieve maximum efficiency. This dissertation concerns several application-tailored accelerated imaging methods through improved sequence design, efficient k-space traverse, as well as tailored image reconstruction algorithm, all together aiming to exploit the full potential of data acquisition and image reconstruction in each application. The first application is ferumoxtyol-enhanced 4D multi-phase cardiovascular MRI on pediatric patients with congenital heart disease. By taking advantage of the high signal-to-noise ratio (SNR) results from contrast enhancement, we introduced two methods to improve the scan efficiency with maintained clinical utility: one with reduced scan time and one with improved temporal resolution. The first method used prospective Poisson-disc under-sampling in combination with graphics processing unit accelerated parallel imaging and compressed sensing combined reconstruction algorithm to reduce scan time by approximately 50% while maintaining highly comparable image quality to un-accelerated acquisition in a clinically practical reconstruction time. The second method utilized a motion weighted reconstruction technique to increase temporal resolution of acquired data, and thus permits improved cardiac functional assessment. Compared with existing acceleration method, the proposed method has nearly three times lower computation burden and six times faster reconstruction speed, all with equal image quality. The second application is noncontrast-enhanced 4D intracranial MR angiography with arterial spin labeling (ASL). Considering the inherently low SNR of ASL signal, we proposed to sample k-space with the efficient golden-angle stack-of-stars trajectory and reconstruct images using compressed sensing with magnitude subtraction as regularization. The acquisition and reconstruction strategy in combination produces images with detailed vascular structures and clean background. At the same time, it allows a reduced temporal blurring delineation of the fine distal arteries when compared with the conventional k-space weighted image contrast (KWIC) reconstruction. Stands upon on this, we further developed an improved stack-of-stars radial sampling strategy for reducing streaking artifacts in general volumetric MRI. By rotating the radial spokes in a golden angle manner along the partition-encoding direction, the aliasing pattern due to under-sampling is modified, resulting in improved image quality for gridding and more advanced reconstruction methods. The third application is low-latency real-time imaging. To achieve sufficient frame rate, real-time MRI typically requires significant k-space under-sampling to accelerate the data acquisition. At the same time, many real-time application, such as interventional MRI, requires user interaction or decision making based on image feedback. Therefore, low-latency on-the-fly reconstruction is highly desirable. We proposed a parallel imaging and convolutional neural network combined image reconstruction framework for low-latency and high quality reconstruction. This is achieved by compacting gradient descent steps resolved from conventional parallel imaging reconstruction as network layers and interleaved with convolutional layers in a general convolutional neural network. Once all parameters of the network are determined during the off-line training process, it can be applied to unseen data with less than 100ms reconstruction time per frame, while more than 1s is usually needed for conventional parallel imaging and compressed sensing combined reconstruction.

Quantitative Magnetic Resonance Imaging

Quantitative Magnetic Resonance Imaging PDF Author: Nicole Seiberlich
Publisher: Academic Press
ISBN: 0128170581
Category : Computers
Languages : en
Pages : 1094

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Book Description
Quantitative Magnetic Resonance Imaging is a ‘go-to’ reference for methods and applications of quantitative magnetic resonance imaging, with specific sections on Relaxometry, Perfusion, and Diffusion. Each section will start with an explanation of the basic techniques for mapping the tissue property in question, including a description of the challenges that arise when using these basic approaches. For properties which can be measured in multiple ways, each of these basic methods will be described in separate chapters. Following the basics, a chapter in each section presents more advanced and recently proposed techniques for quantitative tissue property mapping, with a concluding chapter on clinical applications. The reader will learn: The basic physics behind tissue property mapping How to implement basic pulse sequences for the quantitative measurement of tissue properties The strengths and limitations to the basic and more rapid methods for mapping the magnetic relaxation properties T1, T2, and T2* The pros and cons for different approaches to mapping perfusion The methods of Diffusion-weighted imaging and how this approach can be used to generate diffusion tensor maps and more complex representations of diffusion How flow, magneto-electric tissue property, fat fraction, exchange, elastography, and temperature mapping are performed How fast imaging approaches including parallel imaging, compressed sensing, and Magnetic Resonance Fingerprinting can be used to accelerate or improve tissue property mapping schemes How tissue property mapping is used clinically in different organs Structured to cater for MRI researchers and graduate students with a wide variety of backgrounds Explains basic methods for quantitatively measuring tissue properties with MRI - including T1, T2, perfusion, diffusion, fat and iron fraction, elastography, flow, susceptibility - enabling the implementation of pulse sequences to perform measurements Shows the limitations of the techniques and explains the challenges to the clinical adoption of these traditional methods, presenting the latest research in rapid quantitative imaging which has the possibility to tackle these challenges Each section contains a chapter explaining the basics of novel ideas for quantitative mapping, such as compressed sensing and Magnetic Resonance Fingerprinting-based approaches

Accelerated Imaging Techniques for Chemical Shift Magnetic Resonance Imaging

Accelerated Imaging Techniques for Chemical Shift Magnetic Resonance Imaging PDF Author: Curtis N. Wiens
Publisher:
ISBN:
Category :
Languages : en
Pages : 250

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Book Description
Chemical shift imaging is a magnetic resonance imaging technique that separates the signal from two or more chemical species. The cost of chemical shift encoding is increased acquisition time as multiple acquisitions are required at different echo times. Image accelera tion techniques, typically parallel imaging, are often used to improve coverage and resolution. This thesis describes a new technique for estimating the signal to noise ratio for parallel imaging reconstruction s and proposes new image reconstructions for a ccelerated chemical shift imaging using compressed sensing and/or parallel imaging for two applications: water- at separation and metabolic imaging of hyperpolarized [1-13C] pyruvate. Spatially varying noise in parallel imaging reconstructions makes measurements of the signal to noise ratio, a commonly used metric for image for image quality, difficult. Existing approaches have limitations: they are not applicable to all reconstructions, require significant computation time, or rely on repeated image acquisitions. A signal to noise ratio estimation technique is proposed that does not exhibit these limitations. Water-fat imaging of highly undersampled datasets from the liver, calf, knee, and abdominal cavity are demonstrated using a customized IDEAL-SPGR pulse sequence and an integrated compressed sensing, parallel imaging, water-fat reconstruction. This method offer s image quality comparable to fully sampled reference images for a range of acceleration factors. At high acceleration factors, this method offers improved image quality when compared to the current standard of parallel imaging. Accelerated metabolic imaging of hyperpolarized [1-13C] pyruvate and its metabolic by-products lactate, alanine, and bicarbonate is demonstrated using an integrated compressed sensing, metabolite separation reconstruction. Phantoms are used to validate this technique while retrospectively and prospectively accelerated 3D in vivo datasets are used to demonstrate feasibility. An alternative approach to accelerated metabolic imaging is demonstrated using high performance magnetic field gradient set. This thesis addresses the inherently slow acquisition times of chemical shift imaging by examining the role compressed sensing and parallel imaging can play in chemical shift imaging. An approach to SNR assessment for parallel imaging reconstruction is proposed and approaches to accelerated chemical shift imaging are described for applications in water-fat imaging and metabolic imaging of hyperpolarized [1-13C] pyruvate.

Reconstruction Methods for Accelerated Magnetic Resonance Imaging

Reconstruction Methods for Accelerated Magnetic Resonance Imaging PDF Author: Tao Zhang
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
Magnetic resonance imaging (MRI) is a powerful medical imaging modality widely used in clinical practice. MRI provides excellent soft-tissue contrast, and does not involve ionizing radiation. In an ideal clinical setting for MRI, several requirements have to be met. First of all, diagnostic image quality has to be achieved. Second, fast image reconstruction is required, so that the radiologists can review the images before releasing the patients. Third, fast data acquisition is desired. Short scan time can not only improve patient comfort, but also reduce many imaging artifacts and improve image quality. While advanced methods, such as parallel imaging and compressed sensing, can accelerate MRI data acquisition to some extent, the achievable scan time is still very limited for several MR applications. Meanwhile, the reconstruction time for these advanced methods can take up to hours, and become clinically infeasible. This dissertation describes approaches to maintain a clinically feasible reconstruction time for advanced reconstructions, and approaches to further accelerate MRI applications, specifically MR parameter mapping and dynamic contrast-enhanced (DCE) MRI. The ultimate goal of this work is to make MRI more clinically practical. To maintain a clinically feasible reconstruction time for advanced reconstructions with large coil arrays, a geometric-decomposition coil compression method is proposed. The proposed method exploits the spatially varying data redundancy of large coil arrays, and can compress the raw data from original coils into very few virtual coils. The advanced reconstruction can be directly performed on the virtual coils instead of the original coils. The reconstruction time for large 3D datasets, acquired with 32-channel coils and reconstructed by a combined parallel imaging compressed sensing method, can be reduced to under a minute. The proposed method has been implemented in Lucile Packard Children's Hospital at Stanford. The clinical evaluation suggests that the proposed method can achieve very fast reconstruction without compromising overall image quality and delineation of anatomical structures. MR parameter mapping is a promising approach to characterize intrinsic tissue-dependent information. To accelerate lengthy MR parameter mapping, which can take up to half an hour or more, a locally low-rank method has been proposed. The proposed method has been combined with parallel imaging to achieve further acceleration. Based on preliminary result, the combined parallel imaging locally low-rank method can accelerate variable flip angle T1 mapping by factor of 6, without obvious imaging artifacts. DCE MRI is a standard component of abdominal MRI exams, most commonly used to detect and characterize mass lesions and assess renal function. 3D DCE MRI is often limited compromised spatiotemporal resolution and motion artifacts. In this work, a combined locally low-rank parallel imaging method with soft gating is proposed. The proposed method can significantly reduce motion artifacts for completely free-breathing acquisition and remove the need for deep anesthesia. The high spatiotemporal resolution achieved by the proposed method can also capture the rapid contrast hemodynamics. The proposed method has been deployed clinically in Lucile Packard Children's Hospital at Stanford. Preliminary clinical evaluation results suggest that the proposed method can achieve an image quality very close to a respiratory-triggered data acquisition, but with much higher spatiotemporal resolution.

Magnetic Resonance Image Reconstruction

Magnetic Resonance Image Reconstruction PDF Author: Mehmet Akcakaya
Publisher: Academic Press
ISBN: 012822746X
Category : Science
Languages : en
Pages : 518

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Book Description
Magnetic Resonance Image Reconstruction: Theory, Methods and Applications presents the fundamental concepts of MR image reconstruction, including its formulation as an inverse problem, as well as the most common models and optimization methods for reconstructing MR images. The book discusses approaches for specific applications such as non-Cartesian imaging, under sampled reconstruction, motion correction, dynamic imaging and quantitative MRI. This unique resource is suitable for physicists, engineers, technologists and clinicians with an interest in medical image reconstruction and MRI. Explains the underlying principles of MRI reconstruction, along with the latest research“/li> Gives example codes for some of the methods presented Includes updates on the latest developments, including compressed sensing, tensor-based reconstruction and machine learning based reconstruction

Accelerated Dynamic Magnetic Resonance Imaging

Accelerated Dynamic Magnetic Resonance Imaging PDF Author: Jennifer Steeden
Publisher: Academic Press
ISBN: 9780323953412
Category : Science
Languages : en
Pages : 0

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Book Description
Magnetic Resonance Imaging (MRI) scans play a vital role in diagnosis and monitoring of diseases across the body. However, MRI is a relatively slow imaging technology, resulting in long scan times. This is particularly challenging when imaging dynamic processes. Accelerated Dynamic Magnetic Resonance Imaging: Methods and Applications explains the technologies which can speed up MRI imaging and shows how they have been applied to a broad range of application areas, presenting the challenges and giving practical advice on implementation. With this book the reader will be able to: Modify the MRI sequences to speed up acquisition of data (non-Cartesian trajectories and data under sampling); Use the techniques (parallel imaging, compressed sensing and machine learning) which are commonly used to reconstruct under sampled MRI data; Implement fast MRI imaging techniques for their application areas. Accelerated Dynamic Magnetic Resonance Imaging: Methods and Applications is an ideal resource for the technologist, clinical researcher and clinician who want to understand rapid MRI methods and gain practical advice on their implementation.

Development and Optimization of Methods for Accelerated Magnetic Resonance Imaging

Development and Optimization of Methods for Accelerated Magnetic Resonance Imaging PDF Author: Tom Hilbert
Publisher:
ISBN:
Category :
Languages : en
Pages : 111

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Book Description
Mots-clés de l'auteur: magnetic resonance imaging; quantitative imaging; acquisition acceleration; model-based reconstruction.

Magnetic Resonance Imaging

Magnetic Resonance Imaging PDF Author: Pottumarthi V. Prasad
Publisher: Springer Science & Business Media
ISBN: 1597450103
Category : Medical
Languages : en
Pages : 446

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Book Description
Leading experts in the use of MRI explain its basic principles and demonstrate its power to understand biological processes with numerous cutting-edge applications. To illustrate its capability to reveal exquisite anatomical detail, the authors discuss MRI applications to developmental biology, mouse phenotyping, and fiber architecture. MRI can also provide information about organ and tissue function based on endogenous cantrast mechanisms. Examples of brain, kidney, and cardiac function are included, as well as applications to neuro and tumor pathophysiology. In addition, the volume demonstrates the use of exogenous contrast material in functional assessment of the lung, noninvasive evaluation of tissue pH, the imaging of metabolic activity or gene expression that occur on a molecular level, and cellular labeling using superparamagnetic iron oxide contrast agents.

Development and Application of Quantitative Magnetic Resonance Imaging Methods

Development and Application of Quantitative Magnetic Resonance Imaging Methods PDF Author: Melissa Schall
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

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Book Description


Tailor-Made Polysaccharides in Biomedical Applications

Tailor-Made Polysaccharides in Biomedical Applications PDF Author: Amit Kumar Nayak
Publisher: Academic Press
ISBN: 0128213566
Category : Medical
Languages : en
Pages : 360

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Book Description
Tailor-Made Polysaccharides in Biomedical Applications provides extensive details on all the vital precepts, basics, and fundamental aspects of tailored polysaccharides in the pharmaceutical and biotechnological industries. This information provides readers with the foundation for understanding and developing high-quality products. The utilization of natural polymeric excipients in numerous healthcare applications demands the replacement of the synthetic polymers with natural polymers. Natural polymers are superior in terms of biocompatibility, biodegradability, economic extraction, and ready availability. Natural polymers are especially useful in that they are a renewable source of raw materials, as long as they are grown sustainably. Among these natural polymers, polysaccharides are considered as excellent excipients because they are nontoxic, stable, and biodegradable. Several research innovations have been carried out using polysaccharides in drug delivery applications. This book offers a comprehensive resource to understand the potential of these materials in forming new drug delivery methods. It will be useful to biomedical researchers, chemical engineers, regulatory scientists, and students who are actively involved in developing pharmaceutical products for biomedical applications by using tailor-made polysaccharides. Provides methodology for the design, development, and selection of tailor-made polysaccharides in biomedical applications, including for particular therapeutic applications Includes illustrations demonstrating the mechanism of biological interaction of tailor-made polysaccharides Discusses the regulatory aspects and demonstrates the clinical efficacy of tailor-made polysaccharides