Experimental Algorithmics

Experimental Algorithmics PDF Author: Rudolf Fleischer
Publisher: Springer
ISBN: 3540363831
Category : Computers
Languages : en
Pages : 295

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Book Description
Experimental algorithmics, as its name indicates, combines algorithmic work and experimentation: algorithms are not just designed, but also implemented and tested on a variety of instances. Perhaps the most important lesson in this process is that designing an algorithm is but the first step in the process of developing robust and efficient software for applications. Based on a seminar held at Dagstuhl Castle, Germany in September 2000, this state-of-the-art survey presents a coherent survey of the work done in the area so far. The 11 carefully reviewed chapters provide complete coverage of all current topics in experimental algorithmics.

Algorithms in Bioinformatics

Algorithms in Bioinformatics PDF Author: Vincent Moulton
Publisher: Springer Science & Business Media
ISBN: 3642152937
Category : Computers
Languages : en
Pages : 385

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Book Description
This book constitutes the refereed proceedings of the 10th International Workshop on Algorithms in Bioinformatics, WABI 2010, held in Liverpool, UK, in September 2010. The 30 revised full papers presented were carefully reviewed and selected from 83 submissions. The papers are organized in topical sections on biomolecular structure: RNA, protein and molecular comparison; comparative genomics; haplotype and genotype analysis; high-throughput data analysis: next generation sequencing and flow cytometry; networks; phylogenetics; and sequences, strings and motifs.

Algorithms in Bioinformatics

Algorithms in Bioinformatics PDF Author: Teresa M. Przytycka
Publisher: Springer
ISBN: 3642230385
Category : Computers
Languages : en
Pages : 388

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Book Description
This book constitutes the refereed proceedings of the 11th International Workshop on Algorithms in Bioinformatics, WABI 2011, held in Saarbrücken, Germany, in September 2011. The 30 papers presented were carefully reviewed and selected from 77 submissions. They cover aspects of algorithms in bioinformatics, computational biology and systems biology.

Experimental Algorithmics

Experimental Algorithmics PDF Author: Rudolf Fleischer
Publisher: Springer
ISBN: 3540363831
Category : Computers
Languages : en
Pages : 295

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Book Description
Experimental algorithmics, as its name indicates, combines algorithmic work and experimentation: algorithms are not just designed, but also implemented and tested on a variety of instances. Perhaps the most important lesson in this process is that designing an algorithm is but the first step in the process of developing robust and efficient software for applications. Based on a seminar held at Dagstuhl Castle, Germany in September 2000, this state-of-the-art survey presents a coherent survey of the work done in the area so far. The 11 carefully reviewed chapters provide complete coverage of all current topics in experimental algorithmics.

Proceedings of the 5th Asia-Pacific Bioinformatics Conference

Proceedings of the 5th Asia-Pacific Bioinformatics Conference PDF Author: David Sankoff
Publisher: World Scientific
ISBN: 1860947832
Category : Science
Languages : en
Pages : 391

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Book Description
High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, and gene expression profiles of normal and diseased tissues are being rapidly generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industrial practitioners at the 5th Asia-Pacific Bioinformatics Conference held in Hong Kong in January 2007.

Proceedings of the Twelfth Annual ACM-SIAM Symposium on Discrete Algorithms

Proceedings of the Twelfth Annual ACM-SIAM Symposium on Discrete Algorithms PDF Author: SIAM Activity Group on Discrete Mathematics
Publisher: SIAM
ISBN: 9780898714906
Category : Mathematics
Languages : en
Pages : 962

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Book Description
Contains 130 papers, which were selected based on originality, technical contribution, and relevance. Although the papers were not formally refereed, every attempt was made to verify the main claims. It is expected that most will appear in more complete form in scientific journals. The proceedings also includes the paper presented by invited plenary speaker Ronald Graham, as well as a portion of the papers presented by invited plenary speakers Udi Manber and Christos Papadimitriou.

Proceedings Of The 5th Asia-pacific Bioinformatics Conference

Proceedings Of The 5th Asia-pacific Bioinformatics Conference PDF Author: Francis Y L Chin
Publisher: World Scientific
ISBN: 1908979291
Category : Science
Languages : en
Pages : 391

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Book Description
High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, and gene expression profiles of normal and diseased tissues are being rapidly generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences; the understanding of the interplay among and between genes and proteins; the analysis of genetic variability of species; the identification of pharmacological targets; and the inference of evolutionary origins, mechanisms, and relationships. This proceedings volume contains an up-to-date exchange of knowledge, ideas, and solutions to conceptual and practical issues of bioinformatics by researchers, professionals, and industrial practitioners at the 5th Asia-Pacific Bioinformatics Conference held in Hong Kong in January 2007./a

Algorithms: Advances in Research and Application: 2011 Edition

Algorithms: Advances in Research and Application: 2011 Edition PDF Author:
Publisher: ScholarlyEditions
ISBN: 1464922020
Category : Computers
Languages : en
Pages : 561

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Book Description
Algorithms: Advances in Research and Application: 2011 Edition is a ScholarlyEditions™ eBook that delivers timely, authoritative, and comprehensive information about Algorithms. The editors have built Algorithms: Advances in Research and Application: 2011 Edition on the vast information databases of ScholarlyNews.™ You can expect the information about Algorithms in this eBook to be deeper than what you can access anywhere else, as well as consistently reliable, authoritative, informed, and relevant. The content of Algorithms: Advances in Research and Application: 2011 Edition has been produced by the world’s leading scientists, engineers, analysts, research institutions, and companies. All of the content is from peer-reviewed sources, and all of it is written, assembled, and edited by the editors at ScholarlyEditions™ and available exclusively from us. You now have a source you can cite with authority, confidence, and credibility. More information is available at http://www.ScholarlyEditions.com/.

Combinatorial Pattern Matching

Combinatorial Pattern Matching PDF Author: Raffaele Giancarlo
Publisher: Springer
ISBN: 3642214584
Category : Computers
Languages : en
Pages : 493

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Book Description
This book constitutes the refereed proceedings of the 22nd Annual Symposium on Combinatorial Pattern Matching, CPM 2011, held in Palermi, Italy, in June 2011. The 36 revised full papers presented together with 3 invited talks were carefully reviewed and selected from 70 submissions. The papers address issues of searching and matching strings and more complicated patterns such as trees, regular expressions, graphs, point sets, and arrays. The goal is to derive non-trivial combinatorial properties of such structures and to exploit these properties in order to either achieve superior performance for the corresponding computational problems or pinpoint conditions under which searches cannot be performed efficiently. The meeting also deals with problems in computational biology, data compression and data mining, coding, information retrieval, natural language processing and pattern recognition.

Phylogenetic Supertrees

Phylogenetic Supertrees PDF Author: Olaf R.P. Bininda-Emonds
Publisher: Springer Science & Business Media
ISBN: 1402023308
Category : Science
Languages : en
Pages : 547

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Book Description
This is the first book on "phylogenetic supertrees", a recent, but controversial development for inferring evolutionary trees. Rather than analyze the combined primary character data directly, supertree construction proceeds by combining the tree topologies derived from those data. This difference in strategy has allowed for the exciting possibility of larger, more complete phylogenies than are otherwise currently possible, with the potential to revolutionize evolutionarily-based research. This book provides a comprehensive look at supertrees, ranging from the methods used to build supertrees to the significance of supertrees to bioinformatic and biological research. Reviews of many the major supertree methods are provided and four new techniques, including a Bayesian implementation of supertrees, are described for the first time. The far-reaching impact of supertrees on biological research is highlighted both in general terms and through specific examples from diverse clades such as flowering plants, even-toed ungulates, and primates. The book also critically examines the many outstanding challenges and problem areas for this relatively new field, showing the way for supertree construction in the age of genomics. Interdisciplinary contributions from the majority of the leading authorities on supertree construction in all areas of the bioinformatic community (biology, computer sciences, and mathematics) will ensure that this book is a valuable reference with wide appeal to anyone interested in phylogenetic inference.

Computational Phylogenetics

Computational Phylogenetics PDF Author: Tandy Warnow
Publisher: Cambridge University Press
ISBN: 1107184711
Category : Computers
Languages : en
Pages : 399

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Book Description
This book presents the foundations of phylogeny estimation and technical material enabling researchers to develop improved computational methods.