Molecular Microbial Ecology Manual PDF Download
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Author: Antoon D. L. Akkermans
Publisher: Springer
ISBN: 9400902158
Category : Science
Languages : en
Pages : 266
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Book Description
For a long time microbial ecology has been developed as a distinct field within Ecology. In spite of the important role of microorganisms in the environment, this group of 'invisible' organisms remained unaccessable to other ecologists. Detection and identification of microorganisms remain largely dependent on isolation techniques and characterisation of pure cul tures. We now realise that only a minor fraction of the microbial com munity can be cultivated. As a result of the introduction of molecular methods, microbes can now be detected and identified at the DNA/RNA level in their natural environment. This has opened a new field in ecology: Molecular Microbial Ecology. In the present manual we aim to introduce the microbial ecologist to a selected number of current molecular techniques that are relevant in micro bial ecology. The first edition of the manual contains 33 chapters and an equal number of additional chapters will be added this year. Since the field of molecular ecology is in a continuous progress, we aim to update and extend the Manual regularly and will invite anyone to depo sit their new protocols in full detail in the next edition of this Manual. We hope this book finds its place where it was born: at the lab bench! Antoon D.L. Akkermans, Jan Dirk van Elsas and Frans J. de Bruijn March 1995 Molecular Microbial Ecology Manual 1.3.6: 1-8, 1996. © 1996 Kluwer Academic Publishers.
Author: Antoon D. L. Akkermans
Publisher: Springer
ISBN: 9400902158
Category : Science
Languages : en
Pages : 266
Get Book Here
Book Description
For a long time microbial ecology has been developed as a distinct field within Ecology. In spite of the important role of microorganisms in the environment, this group of 'invisible' organisms remained unaccessable to other ecologists. Detection and identification of microorganisms remain largely dependent on isolation techniques and characterisation of pure cul tures. We now realise that only a minor fraction of the microbial com munity can be cultivated. As a result of the introduction of molecular methods, microbes can now be detected and identified at the DNA/RNA level in their natural environment. This has opened a new field in ecology: Molecular Microbial Ecology. In the present manual we aim to introduce the microbial ecologist to a selected number of current molecular techniques that are relevant in micro bial ecology. The first edition of the manual contains 33 chapters and an equal number of additional chapters will be added this year. Since the field of molecular ecology is in a continuous progress, we aim to update and extend the Manual regularly and will invite anyone to depo sit their new protocols in full detail in the next edition of this Manual. We hope this book finds its place where it was born: at the lab bench! Antoon D.L. Akkermans, Jan Dirk van Elsas and Frans J. de Bruijn March 1995 Molecular Microbial Ecology Manual 1.3.6: 1-8, 1996. © 1996 Kluwer Academic Publishers.
Author: Mark Osborn
Publisher: Taylor & Francis
ISBN: 1135320411
Category : Science
Languages : en
Pages : 370
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Book Description
Microoganisms are distributed across every ecosystem, and microbial transformations are fundamental to the operation of the biosphere. Microbial ecology is the study of this interaction between microorganisms and their environment, and arguably represents one of the most important areas of biological research. Yet for many years our study of microbial flora was severely limited: the primary method of culturing microorganisms on media allowed us to study only between 0.1 and 10% of the total microbial flora in any given environment. Molecular Microbial Ecology gives a comprehensive guide to the recent revolution in the study of microorganisms in the environment. Details are given on molecular methods for isolating some of the previously uncultured and numerically dominant microbial groups. PCR-based approaches to studying prokaryotic systematics are described, including ribosomal RNA analysis and stable isotope probing. Later chapters cover DNA hybridisation techniques (including fluorescent in situ hybridisation), as well as genomic and metagenomic approaches to microbial ecology. Gathering together some of the world’s leading experts, this book provides an invaluable introduction to the modern theory and molecular methods used in studying microbial ecology.
Author: John Paul
Publisher: Gulf Professional Publishing
ISBN: 9780125215305
Category : Science
Languages : en
Pages : 696
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Book Description
Written by experts in the field, Marine Microbiology presents the latest experimental techniques in the detail required for modern environmental microbiological research. Chapters start with the introduction and background of a particular method, followed by a concise description of the procedures involved. There is also a list of vendors who supply critical components which includes names, addresses, and websites at the end of each chapter. Covers both established and novel current methods Historical perspective Enumeration of autotrophic picoplankton, bacteria and viruses Fingerprinting Viral Assemblages by Pulsed Field Gel electrophoresis (PFGE) Fluorescence in situ hybridization with rRNA-targeted oligonucleotide probes Detection of phytoplankton by remote sensing Marine pollution microbiology Microbes in extreme environments List of suppliers provided at end of each chapter Colour plate section
Author: John Eric Cooper
Publisher: CABI
ISBN: 1845931831
Category : Science
Languages : en
Pages : 309
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Book Description
Plants have evolved both general and highly specialized defence mechanisms that function to prevent diseases caused by the majority of microbial pathogens they encounter. Highly specialized defence is governed by specific interactions between pathogen avr (avirulence) genes' loci and alleles of the corresponding plant disease resistance (R) loci. These defences can be very dynamic as microbes from the same species can act differently in their co-evolution with the specific host plant, which in turn has similarly evolved its response to external threats. There have been major developments in the field of plant-microbe interactions in recent years, due to newly developed techniques and the availability of genomic information. Molecular Plant-Microbe Interactions explores these new discoveries, focusing primarily on the mechanisms controlling plant disease resistance, the cross-talk among the pathways involved and the strategies used by the pathogens to suppress these defences. By exploring developments in plant defences, pathogen's counter-defences and mutually beneficial plant-microbe interactions, this book will be useful for researchers and students in plant pathology and plant biology-related areas.
Author: Robert Seviour
Publisher: IWA Publishing
ISBN: 1843390329
Category : Science
Languages : en
Pages : 685
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Book Description
Microbial Ecology of Activated Sludge, written for both microbiologists and engineers, critically reviews our current understanding of the microbiology of activated sludge, the most commonly used process for treating both domestic and industrial wastes. The contributors are all internationally recognized as leading research workers in activated sludge microbiology, and all have made valuable contributions to our present understanding of the process. The book pays particular attention to how the application of molecular methods has changed our perceptions of the identity of the filamentous bacteria causing the operational disorders of bulking and foaming, and the bacteria responsible for nitrification and denitrification and phosphorus accumulation in nutrient removal processes. Special attention is given to how it is now becoming possible to relate the composition of the community of microbes present in activated sludge, and the in situ function of individual populations there, and how such information might be used to manage and control these systems better. Detailed descriptions of some of these molecular methods are provided to allow newcomers to this field of study an opportunity to apply them in their research. Comprehensive descriptions of organisms of interest and importance are also given, together with high quality photos of activated sludge microbes. Activated sludge processes have been used globally for nearly 100 years, and yet we still know very little of how they work. In the past 15 years the advent of molecular culture independent methods of study have provided tools enabling microbiologists to understand which organisms are present in activated sludge, and critically, what they might be doing there. Microbial Ecology of Activated Sludge will be the first book available to deal comprehensively with the very exciting new information from applying these methods, and their impact on how we now view microbiologically mediated processes taking place there. As such it will be essential reading for microbial ecologists, environmental biotechnologists and engineers involved in designing and managing these plants. It will also be suitable for postgraduate students working in this field.
Author: Arthur C. Ouwehand
Publisher: CRC Press
ISBN: 1420014951
Category : Medical
Languages : en
Pages : 431
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Book Description
This reference supplies a comprehensive and current overview of every aspect of gastrointestinal microbiota. Expertly written chapters cover conventional and molecular techniques for the study of differing microbial populations, as well as the analysis of microbial activity and interaction with host bodies. Illustrative and up-to-date, this source
Author: Michael Gillings
Publisher: Garland Science
ISBN: 1135322295
Category : Science
Languages : en
Pages : 398
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Book Description
Plant Microbiology provides a comprehensive source of information on DNA sequencing and mapping, the newest technology and procedures in areas such as radiation hybrid mapping, FISH and specialized sequencing techniques are covered. The book also describes how transgene expression is controlled in plants and how advanced information strategies can be used to manipulate and modify the plant genome. An exciting final chapter provides and overview of all the applications of plant transformation in agriculture, medicine and industry.
Author: J Vaun McArthur
Publisher: Elsevier
ISBN: 0080511546
Category : Science
Languages : en
Pages : 429
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Book Description
Based on the thesis that insights into both evolution and ecology can be obtained through the study of microorganismsm, Microbial Ecology examines microbiology through the lens of evolutionary ecology. Measured from a microbial perspective, this text covers such topics as optimal foraging, genome, reduction, novel evolutionary mechanisms, bacterial speciation, and r and K selection. Numerous aspects of microbial existence are also discussed and include: species competition, predation, parasitism, mutualism, microbial communication through quorum sensing and other. The result is a context for understanding microbes in nature and a framework for microbiologists working in industry, medicine, and the environment. - Applies evolutionary ecological concepts to microbes - Addresses individual, population and community ecology - Presents species concepts and offers insights on the origin of life and modern microbial ecology - Examines topics such as species interactions, nutrient cycling, quorum sensing and cheating
Author: Ajit Varma
Publisher: Springer Science & Business Media
ISBN: 3540740511
Category : Science
Languages : en
Pages : 643
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Book Description
This volume examines the interactions between plants and microorganisms located on plant surfaces, exploring their possible biotechnological applications. Interactions of microbial communities with plants are illustrated by experimental studies of typical symbiosis. Topics include signaling within a symbiosis, molecular differences between symbiotic and pathogenic microorganisms, and the role of microorganisms in the development of plants.
Author: Jan Dirk van Elsas
Publisher: CRC Press
ISBN: 1420015206
Category : Technology & Engineering
Languages : en
Pages : 698
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Book Description
In the ten years since the publication of Modern Soil Microbiology, the study of soil microbiology has significantly changed, both in the understanding of the diversity and function of soil microbial communities and in research methods. Ideal for students in a variety of disciplines, this second edition provides a cutting-edge examination of a fascinating discipline that encompasses ecology, physiology, genetics, molecular biology, and biotechnology, and makes use of biochemical and biophysical approaches. The chapters cover topics ranging from the fundamental to the applied and describe the use of advanced methods that have provided a great thrust to the discipline of soil microbiology. Using the latest molecular analyses, they integrate principles of soil microbiology with novel insights into the physiology of soil microorganisms. The authors discuss the soil and rhizosphere as habitats for microorganisms, then go on to describe the different microbial groups, their adaptive responses, and their respective processes in interactive and functional terms. The book highlights a range of applied aspects of soil microbiology, including the nature of disease-suppressive soils, the use of biological control agents, biopesticides and bioremediation agents, and the need for correct statistics and experimentation in the analyses of the data obtained from soil systems.
