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Author: Philip K. Maini
Publisher: Springer Science & Business Media
ISBN: 1461301335
Category : Mathematics
Languages : en
Pages : 327
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Book Description
This 121st IMA volume, entitled MATHEMATICAL MODELS FOR BIOLOGICAL PATTERN FORMATION is the first of a new series called FRONTIERS IN APPLICATION OF MATHEMATICS. The FRONTIERS volumes are motivated by IMA pro grams and workshops, but are specially planned and written to provide an entree to and assessment of exciting new areas for the application of mathematical tools and analysis. The emphasis in FRONTIERS volumes is on surveys, exposition and outlook, to attract more mathematicians and other scientists to the study of these areas and to focus efforts on the most important issues, rather than papers on the most recent research results aimed at an audience of specialists. The present volume of peer-reviewed papers grew out of the 1998-99 IMA program on "Mathematics in Biology," in particular the Fall 1998 em phasis on "Theoretical Problems in Developmental Biology and Immunol ogy." During that period there were two workshops on Pattern Formation and Morphogenesis, organized by Professors Murray, Maini and Othmer. James Murray was one of the principal organizers for the entire year pro gram. I am very grateful to James Murray for providing an introduction, and to Philip Maini and Hans Othmer for their excellent work in planning and preparing this first FRONTIERS volume. I also take this opportunity to thank the National Science Foundation, whose financial support of the IMA made the Mathematics in Biology pro gram possible.
Author: Philip K. Maini
Publisher: Springer Science & Business Media
ISBN: 1461301335
Category : Mathematics
Languages : en
Pages : 327
Get Book Here
Book Description
This 121st IMA volume, entitled MATHEMATICAL MODELS FOR BIOLOGICAL PATTERN FORMATION is the first of a new series called FRONTIERS IN APPLICATION OF MATHEMATICS. The FRONTIERS volumes are motivated by IMA pro grams and workshops, but are specially planned and written to provide an entree to and assessment of exciting new areas for the application of mathematical tools and analysis. The emphasis in FRONTIERS volumes is on surveys, exposition and outlook, to attract more mathematicians and other scientists to the study of these areas and to focus efforts on the most important issues, rather than papers on the most recent research results aimed at an audience of specialists. The present volume of peer-reviewed papers grew out of the 1998-99 IMA program on "Mathematics in Biology," in particular the Fall 1998 em phasis on "Theoretical Problems in Developmental Biology and Immunol ogy." During that period there were two workshops on Pattern Formation and Morphogenesis, organized by Professors Murray, Maini and Othmer. James Murray was one of the principal organizers for the entire year pro gram. I am very grateful to James Murray for providing an introduction, and to Philip Maini and Hans Othmer for their excellent work in planning and preparing this first FRONTIERS volume. I also take this opportunity to thank the National Science Foundation, whose financial support of the IMA made the Mathematics in Biology pro gram possible.
Author: Hans Meinhardt
Publisher:
ISBN:
Category : Science
Languages : en
Pages : 252
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Book Description
Author: Andreas Deutsch
Publisher: Birkhäuser
ISBN: 1489979808
Category : Mathematics
Languages : en
Pages : 470
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Book Description
This text explores the use of cellular automata in modeling pattern formation in biological systems. It describes several mathematical modeling approaches utilizing cellular automata that can be used to study the dynamics of interacting cell systems both in simulation and in practice. New in this edition are chapters covering cell migration, tissue development, and cancer dynamics, as well as updated references and new research topic suggestions that reflect the rapid development of the field. The book begins with an introduction to pattern-forming principles in biology and the various mathematical modeling techniques that can be used to analyze them. Cellular automaton models are then discussed in detail for different types of cellular processes and interactions, including random movement, cell migration, adhesive cell interaction, alignment and cellular swarming, growth processes, pigment cell pattern formation, tissue development, tumor growth and invasion, and Turing-type patterns and excitable media. In the final chapter, the authors critically discuss possibilities and limitations of the cellular automaton approach in modeling various biological applications, along with future research directions. Suggestions for research projects are provided throughout the book to encourage additional engagement with the material, and an accompanying simulator is available for readers to perform their own simulations on several of the models covered in the text. QR codes are included within the text for easy access to the simulator. With its accessible presentation and interdisciplinary approach, Cellular Automaton Modeling of Biological Pattern Formation is suitable for graduate and advanced undergraduate students in mathematical biology, biological modeling, and biological computing. It will also be a valuable resource for researchers and practitioners in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science. PRAISE FOR THE FIRST EDITION “An ideal guide for someone with a mathematical or physical background to start exploring biological modelling. Importantly, it will also serve as an excellent guide for experienced modellers to innovate and improve their methodologies for analysing simulation results.” —Mathematical Reviews
Author: H. Frederick Nijhout
Publisher: CRC Press
ISBN: 0429972997
Category : Mathematics
Languages : en
Pages : 360
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Book Description
This Lecture Notes Volume represents the first time any of the summer school lectures have been collected and published on a discrete subject rather than grouping all of a season's lectures together. This volume provides a broad survey of current thought on the problem of pattern formation. Spanning six years of summer school lectures, it includes articles which examine the origin and evolution of spatial patterns in physio-chemical and biological systems from a great diversity of theoretical and mechanistic perspectives. In addition, most of these pieces have been updated by their authors and three articles never previously published have been added.
Author: S. Barry Cooper
Publisher: Cambridge University Press
ISBN: 131658917X
Category : Mathematics
Languages : en
Pages : 398
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Book Description
Alan Turing (1912–1954) made seminal contributions to mathematical logic, computation, computer science, artificial intelligence, cryptography and theoretical biology. In this volume, outstanding scientific thinkers take a fresh look at the great range of Turing's contributions, on how the subjects have developed since his time, and how they might develop still further. The contributors include Martin Davis, J. M. E. Hyland, Andrew R. Booker, Ueli Maurer, Kanti V. Mardia, S. Barry Cooper, Stephen Wolfram, Christof Teuscher, Douglas Richard Hofstadter, Philip K. Maini, Thomas E. Woolley, Eamonn A. Gaffney, Ruth E. Baker, Richard Gordon, Stuart Kauffman, Scott Aaronson, Solomon Feferman, P. D. Welch and Roger Penrose. These specially commissioned essays will provoke and engross the reader who wishes to understand better the lasting significance of one of the twentieth century's deepest thinkers.
Author: Jeff Jones
Publisher: Springer
ISBN: 3319168231
Category : Technology & Engineering
Languages : en
Pages : 369
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Book Description
This book addresses topics of mobile multi-agent systems, pattern formation, biological modelling, artificial life, unconventional computation, and robotics. The behaviour of a simple organism which is capable of remarkable biological and computational feats that seem to transcend its simple component parts is examined and modelled. In this book the following question is asked: How can something as simple as Physarum polycephalum - a giant amoeboid single-celled organism which does not possess any neural tissue, fixed skeleton or organised musculature - can approximate complex computational behaviour during its foraging, growth and adaptation of its amorphous body plan, and with such limited resources? To answer this question the same apparent limitations as faced by the organism are applied: using only simple components with local interactions. A synthesis approach is adopted and a mobile multi-agent system with very simple individual behaviours is employed. It is shown their interactions yield emergent behaviour showing complex self-organised pattern formation with material-like evolution. The presented model reproduces the biological behaviour of Physarum; the formation, growth and minimisation of transport networks. In its conclusion the book moves beyond Physarum and provides results of scoping experiments approximating other complex systems using the multi-agent approach. The results of this book demonstrate the power and range of harnessing emergent phenomena arising in simple multi-agent systems for biological modelling, computation and soft-robotics applications. It methodically describes the necessary components and their interactions, showing how deceptively simple components can create powerful mechanisms, aided by abundant illustrations, supplementary recordings and interactive models. It will be of interest to those in biological sciences, physics, computer science and robotics who wish to understand how simple components can result in complex and useful behaviours and who wish explore the potential of guided pattern formation themselves.
Author: Ranjit Kumar Upadhyay
Publisher: Chapman & Hall/CRC
ISBN: 9781000334241
Category : Mathematics
Languages : en
Pages : 0
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Book Description
The book provides an introduction to deterministic (and some stochastic) modeling of spatiotemporal phenomena in ecology, epidemiology, and neural systems. A survey of the classical models in the fields with up to date applications is given. The book begins with detailed description of how spatial dynamics/diffusive processes influence the dynamics of biological populations. These processes play a key role in understanding the outbreak and spread of pandemics which help us in designing the control strategies from the public health perspective. A brief discussion on the functional mechanism of the brain (single neuron models and network level) with classical models of neuronal dynamics in space and time is given. Relevant phenomena and existing modeling approaches in ecology, epidemiology and neuroscience are introduced, which provide examples of pattern formation in these models. The analysis of patterns enables us to study the dynamics of macroscopic and microscopic behaviour of underlying systems and travelling wave type patterns observed in dispersive systems. Moving on to virus dynamics, authors present a detailed analysis of different types models of infectious diseases including two models for influenza, five models for Ebola virus and seven models for Zika virus with diffusion and time delay. A Chapter is devoted for the study of Brain Dynamics (Neural systems in space and time). Significant advances made in modeling the reaction-diffusion systems are presented and spatiotemporal patterning in the systems is reviewed. Development of appropriate mathematical models and detailed analysis (such as linear stability, weakly nonlinear analysis, bifurcation analysis, control theory, numerical simulation) are presented. Key Features Covers the fundamental concepts and mathematical skills required to analyse reaction-diffusion models for biological populations. Concepts are introduced in such a way that readers with a basic knowledge of differential equations and numerical methods can understand the analysis. The results are also illustrated with figures. Focuses on mathematical modeling and numerical simulations using basic conceptual and classic models of population dynamics, Virus and Brain dynamics. Covers wide range of models using spatial and non-spatial approaches. Covers single, two and multispecies reaction-diffusion models from ecology and models from bio-chemistry. Models are analysed for stability of equilibrium points, Turing instability, Hopf bifurcation and pattern formations. Uses Mathematica for problem solving and MATLAB for pattern formations. Contains solved Examples and Problems in Exercises. The Book is suitable for advanced undergraduate, graduate and research students. For those who are working in the above areas, it provides information from most of the recent works. The text presents all the fundamental concepts and mathematical skills needed to build models and perform analyses.
Author: Paul Bourgine
Publisher: Springer Science & Business Media
ISBN: 3642131743
Category : Technology & Engineering
Languages : en
Pages : 353
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Book Description
What are the relations between the shape of a system of cities and that of fish school? Which events should happen in a cell in order that it participates to one of the finger of our hands? How to interpret the shape of a sand dune? This collective book written for the non-specialist addresses these questions and more generally, the fundamental issue of the emergence of forms and patterns in physical and living systems. It is a single book gathering the different aspects of morphogenesis and approaches developed in different disciplines on shape and pattern formation. Relying on the seminal works of D’Arcy Thompson, Alan Turing and René Thom, it confronts major examples like plant growth and shape, intra-cellular organization, evolution of living forms or motifs generated by crystals. A book essential to understand universal principles at work in the shapes and patterns surrounding us but also to avoid spurious analogies.
Author: Vincenzo Capasso
Publisher: Springer Science & Business Media
ISBN: 3642201644
Category : Mathematics
Languages : en
Pages : 283
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Book Description
Pattern Formation in Morphogenesis is a rich source of interesting and challenging mathematical problems. The volume aims at showing how a combination of new discoveries in developmental biology and associated modelling and computational techniques has stimulated or may stimulate relevant advances in the field. Finally it aims at facilitating the process of unfolding a mutual recognition between Biologists and Mathematicians of their complementary skills, to the point where the resulting synergy generates new and novel discoveries. It offers an interdisciplinary interaction space between biologists from embryology, genetics and molecular biology who present their own work in the perspective of the advancement of their specific fields, and mathematicians who propose solutions based on the knowledge grasped from biologists.
Author: Stephen Coombes
Publisher: Springer
ISBN: 3642545939
Category : Mathematics
Languages : en
Pages : 488
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Book Description
Neural field theory has a long-standing tradition in the mathematical and computational neurosciences. Beginning almost 50 years ago with seminal work by Griffiths and culminating in the 1970ties with the models of Wilson and Cowan, Nunez and Amari, this important research area experienced a renaissance during the 1990ties by the groups of Ermentrout, Robinson, Bressloff, Wright and Haken. Since then, much progress has been made in both, the development of mathematical and numerical techniques and in physiological refinement und understanding. In contrast to large-scale neural network models described by huge connectivity matrices that are computationally expensive in numerical simulations, neural field models described by connectivity kernels allow for analytical treatment by means of methods from functional analysis. Thus, a number of rigorous results on the existence of bump and wave solutions or on inverse kernel construction problems are nowadays available. Moreover, neural fields provide an important interface for the coupling of neural activity to experimentally observable data, such as the electroencephalogram (EEG) or functional magnetic resonance imaging (fMRI). And finally, neural fields over rather abstract feature spaces, also called dynamic fields, found successful applications in the cognitive sciences and in robotics. Up to now, research results in neural field theory have been disseminated across a number of distinct journals from mathematics, computational neuroscience, biophysics, cognitive science and others. There is no comprehensive collection of results or reviews available yet. With our proposed book Neural Field Theory, we aim at filling this gap in the market. We received consent from some of the leading scientists in the field, who are willing to write contributions for the book, among them are two of the founding-fathers of neural field theory: Shun-ichi Amari and Jack Cowan.
