Using High-resolution Glider Data and Biogeochemical Modeling to Investigate Phytoplankton Variability in the Ross Sea

Using High-resolution Glider Data and Biogeochemical Modeling to Investigate Phytoplankton Variability in the Ross Sea PDF Author: Daniel Edward Kaufman
Publisher:
ISBN:
Category : Biogeochemistry
Languages : en
Pages : 183

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Book Description
As Earth’s climate changes, polar environments experience a disproportionate share of extreme shifts. Because the Ross Sea shelf has the highest annual productivity of any Antarctic continental shelf, this region is of particular interest when striving to characterize current and future changes in Antarctic systems. However, understanding of mesoscale variability of biogeochemical patterns in the Ross Sea and how this variability affects assemblage dynamics is incomplete. Furthermore, it is unknown how the Ross Sea may respond to projected warming, reduced summer sea ice concentrations, and shallower mixed layers during the next century. To investigate these dynamics and explore their consequences over the next century, high-resolution glider observations were analyzed and used in conjunction with a one-dimensional, data-assimilative biogeochemical-modeling framework. An analysis of glider observations from two latitudinal sections in the Ross Sea characterized mesoscale variability associated with the phytoplankton bloom and highlighted potential mechanisms driving change in the assemblage. In particular, an observed increase in the ratio of carbon to chlorophyll (C:Chl) suggested a marked transition from a phytoplankton assemblage dominated by Phaeocystis antarctica- to one dominated by diatoms. The expected control of phytoplankton variability by Modified Circumpolar Deep Water and mixed layer depth were shown to be insignificant relative to the effects of wind and sea surface temperature on the temporal/spatial scales measured by the glider. Additional glider measurements were used to force the Model of Ecosystem Dynamics, nutrient Utilisation, Sequestration and Acidification, which was adapted for use in the Ross Sea (MEDUSA-RS) to include both solitary and colonial forms of Phaeocystis antarctica. The impacts of climate-induced changes on Ross Sea phytoplankton were investigated with MEDUSA-RS using projections of physical drivers for mid- and late-21st century, and these experiments indicated increases of primary productivity and carbon export flux. Additional scenario experiments demonstrated that earlier availability of low light due to reduction of sea ice early in the growing season was the primary driver of simulated productivity increases over the next century; shallower mixed layer depths additionally contributed to changes of phytoplankton composition and export. Glider data were assimilated into MEDUSA-RS using the Marine Model Optimization Testbed (MarMOT) to optimize eight phytoplankton model parameters. Assimilation experiments that used different data subsets suggest that assimilating observations at the surface alone, as are typically available from remote-sensing platforms, may underestimate carbon export to depth and overestimate primary production. Experiments assimilating observations characteristic of a cruise-based sampling frequency produced a wide range of solutions, depending on which days were sampled, suggesting the potential for large errors in productivity and export. Finally, assimilating data from different spatial areas resulted in less variation of optimal solutions than assimilating data from different time periods in the bloom progression; these temporal differences are primarily driven by decreasing colonial P. antarctica growth rates, increasing colonial P. antarctica C:Chl, and faster sinking of colonies as the bloom progresses from the accumulation stage through dissipation. Overall, this dissertation research demonstrates the value of using bio-optical glider observations in conjunction with modeling to characterize phytoplankton dynamics in a remote marine ecosystem. High-resolution glider data are better able to resolve mesoscale physical-biological relationships, which are typically not discernible from lower frequency data, but it can be difficult to identify mechanistic relationships from in situ measurements alone. In addition, biogeochemical models can be used to extend insights gained by empirical observation, but application is often limited by the quantity and type of in situ data appropriate for evaluation and forcing. The use of gliders for facilitating development and operation of a lower trophic level model demonstrated the effectiveness of a synthetic approach that partly overcomes the individual limitations of these otherwise distinct approaches. Finally, the combination of these approaches is especially useful for gaining a better understanding of ecosystem dynamics in regions similar to the Ross Sea that are undergoing substantive climate-induced changes and where harsh conditions make other means of access difficult.

Using High-resolution Glider Data and Biogeochemical Modeling to Investigate Phytoplankton Variability in the Ross Sea

Using High-resolution Glider Data and Biogeochemical Modeling to Investigate Phytoplankton Variability in the Ross Sea PDF Author: Daniel Edward Kaufman
Publisher:
ISBN:
Category : Biogeochemistry
Languages : en
Pages : 183

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Book Description
As Earth’s climate changes, polar environments experience a disproportionate share of extreme shifts. Because the Ross Sea shelf has the highest annual productivity of any Antarctic continental shelf, this region is of particular interest when striving to characterize current and future changes in Antarctic systems. However, understanding of mesoscale variability of biogeochemical patterns in the Ross Sea and how this variability affects assemblage dynamics is incomplete. Furthermore, it is unknown how the Ross Sea may respond to projected warming, reduced summer sea ice concentrations, and shallower mixed layers during the next century. To investigate these dynamics and explore their consequences over the next century, high-resolution glider observations were analyzed and used in conjunction with a one-dimensional, data-assimilative biogeochemical-modeling framework. An analysis of glider observations from two latitudinal sections in the Ross Sea characterized mesoscale variability associated with the phytoplankton bloom and highlighted potential mechanisms driving change in the assemblage. In particular, an observed increase in the ratio of carbon to chlorophyll (C:Chl) suggested a marked transition from a phytoplankton assemblage dominated by Phaeocystis antarctica- to one dominated by diatoms. The expected control of phytoplankton variability by Modified Circumpolar Deep Water and mixed layer depth were shown to be insignificant relative to the effects of wind and sea surface temperature on the temporal/spatial scales measured by the glider. Additional glider measurements were used to force the Model of Ecosystem Dynamics, nutrient Utilisation, Sequestration and Acidification, which was adapted for use in the Ross Sea (MEDUSA-RS) to include both solitary and colonial forms of Phaeocystis antarctica. The impacts of climate-induced changes on Ross Sea phytoplankton were investigated with MEDUSA-RS using projections of physical drivers for mid- and late-21st century, and these experiments indicated increases of primary productivity and carbon export flux. Additional scenario experiments demonstrated that earlier availability of low light due to reduction of sea ice early in the growing season was the primary driver of simulated productivity increases over the next century; shallower mixed layer depths additionally contributed to changes of phytoplankton composition and export. Glider data were assimilated into MEDUSA-RS using the Marine Model Optimization Testbed (MarMOT) to optimize eight phytoplankton model parameters. Assimilation experiments that used different data subsets suggest that assimilating observations at the surface alone, as are typically available from remote-sensing platforms, may underestimate carbon export to depth and overestimate primary production. Experiments assimilating observations characteristic of a cruise-based sampling frequency produced a wide range of solutions, depending on which days were sampled, suggesting the potential for large errors in productivity and export. Finally, assimilating data from different spatial areas resulted in less variation of optimal solutions than assimilating data from different time periods in the bloom progression; these temporal differences are primarily driven by decreasing colonial P. antarctica growth rates, increasing colonial P. antarctica C:Chl, and faster sinking of colonies as the bloom progresses from the accumulation stage through dissipation. Overall, this dissertation research demonstrates the value of using bio-optical glider observations in conjunction with modeling to characterize phytoplankton dynamics in a remote marine ecosystem. High-resolution glider data are better able to resolve mesoscale physical-biological relationships, which are typically not discernible from lower frequency data, but it can be difficult to identify mechanistic relationships from in situ measurements alone. In addition, biogeochemical models can be used to extend insights gained by empirical observation, but application is often limited by the quantity and type of in situ data appropriate for evaluation and forcing. The use of gliders for facilitating development and operation of a lower trophic level model demonstrated the effectiveness of a synthetic approach that partly overcomes the individual limitations of these otherwise distinct approaches. Finally, the combination of these approaches is especially useful for gaining a better understanding of ecosystem dynamics in regions similar to the Ross Sea that are undergoing substantive climate-induced changes and where harsh conditions make other means of access difficult.

Oceanobs'19: An Ocean of Opportunity. Volume I

Oceanobs'19: An Ocean of Opportunity. Volume I PDF Author: Tong Lee
Publisher: Frontiers Media SA
ISBN: 2889631184
Category : Science
Languages : en
Pages : 783

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Book Description
This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.

Evaluating the Frequency, Magnitude, and Biogeochemical Consequences of Under-ice Phytoplankton Blooms

Evaluating the Frequency, Magnitude, and Biogeochemical Consequences of Under-ice Phytoplankton Blooms PDF Author: Courtney Michelle Payne
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

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The Arctic Ocean has changed substantially because of climate change. The loss of sea ice extent and thickness has increased light availability in the surface ocean during the ice-covered portion of the year. Sea ice loss has also been a factor in the observed increases in sea surface temperatures and likely impacts surface ocean nutrient inventories. These changing environmental conditions have substantially altered patterns of phytoplankton net primary production (NPP) across the Arctic Ocean. While NPP in the Arctic Ocean was previously considered insubstantial until the time of sea ice breakup and retreat, the observation of massive under-ice (UI) phytoplankton blooms in many of the Arctic seas reveals that the largest pulse of NPP may be produced prior to sea ice retreat. However, estimating how much NPP is generated during the UI part of the year is challenging, as satellite observations are hampered by sea ice cover and very few field campaigns have targeted UI blooms for study. This thesis uses a combination of laboratory experiments, biogeochemical modeling, and an analysis of satellite remote sensing data to better understand how the magnitude and spatial frequency of UI phytoplankton blooms has changed over time in the Arctic Ocean, as well as to assess the likely biogeochemical consequences of these blooms. In Chapter 2, I present a one-dimensional ecosystem model (CAOS-GO), which I used to evaluate the magnitude of UI phytoplankton blooms in the northern Chukchi Sea (72°N) between 1988 and 2018. UI blooms were produced in all but four years over that period, accounted for half of total annual NPP, and were the primary drivers of interannual variability in NPP. Further, I found that years with large UI blooms had reduced rates of zooplankton grazing, leading to an intensification of the mismatch between phytoplankton and zooplankton populations. In Chapter 3, I used the same model configuration to investigate the role of UI bloom variability in controlling sedimentary processes in the northern Chukchi Sea. I found that, as total annual NPP increased from 1988 to 2018, there were increases in particle export to the benthos, nitrification in the water column and the sediments, and sedimentary denitrification. These increases in particle export to the benthos and denitrification were driven by higher rates of NPP early in the year (January-June) and were highest in years where under-ice blooms dominate, indicating the importance of UI NPP as drivers of these biogeochemical consequences. Additionally, I tested the system's sensitivity to added N, finding that, if N supply in the region increased, 30\% of the added N would subsequently be lost to denitrification. I subsequently deployed this model in the southern Chukchi Sea (68°N) to understand latitudinal differences in UI bloom importance across the region (Chapter 4). I found that UI blooms were far less important contributors to total NPP in the southern Chukchi Sea. Further, I found that their importance was waning over time; NPP generated in the UI period from 2013-2018 was only 34\% of the 1988-1993 mean. This lower rate of UI NPP was driven by a far shorter UI period as sea ice retreated nearly six weeks earlier than in the northern Chukchi Sea. However, low UI NPP was associated with higher rates of both total NPP and sedimentary denitrification in the southern Chukchi Sea than in the north. In Chapter 5, I used satellite remote sensing to determine how UI bloom frequency changed across the Arctic between 2003 and 2021. I found that UI blooms are a widespread feature and can be generated across 40\% of the observable seasonal sea ice zone in the Arctic Ocean. While there was an increase in observable area as sea ice retreated, there was no change in UI area, driving a nearly 10\% decline in the proportion of UI bloom prevalence. The Chukchi Sea was identified as both the region with the highest prevalence of UI blooms and the region most responsible for the decline in UI blooms. Finally, to understand the functional relationship between co-limiting light and nutrient conditions on phytoplankton growth, I conducted a laboratory experiment (Chapter 6). Phytoplankton growth under co-limiting conditions, which is frequently observed in the field, is often modeled using one of two functional relationships, but these relationships produce vastly different predictions of phytoplankton bloom magnitude. Although this laboratory experiment aimed to quantify the functional relationship of light and nutrient limitation on phytoplankton growth, I faced challenges in quantifying the nitrogen (N) concentration and was unable to meaningfully distinguish between these two functional relationships. However, this work also demonstrated that there is little difference between these functional relationships in areas like the Arctic Ocean, where nutrient concentrations can be rapidly depleted, diminishing from non-limiting to scarce over just a few days. Together, the results of this dissertation suggest that UI phytoplankton blooms can substantially contribute to total NPP, drive reductions in food availability, and change the rate of nitrogen loss. However, this work also demonstrates that UI blooms, which have likely been an important source of NPP across the Arctic since at least the 1980s, are likely an ephemeral feature, with their prevalence likely to decline in coming years as sea ice retreat shifts earlier.

Modeling the Plankton–Enhancing the Integration of Biological Knowledge and Mechanistic Understanding

Modeling the Plankton–Enhancing the Integration of Biological Knowledge and Mechanistic Understanding PDF Author: Christian Lindemann
Publisher: Frontiers Media SA
ISBN: 2889453650
Category :
Languages : en
Pages : 228

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Book Description
In light of climate change and allied changes to marine ecosystems, mathematical models have become an important tool to examine processes and predict phenomena from local through to global scales. In recent years model studies, laboratory experiments and a better ecological understanding of the pelagic ecosystem have enabled advancements on fundamental challenges in oceanography, including marine production, biodiversity and anticipation of future conditions in the ocean. This research topic presents a number of studies that investigate functionally diverse organism in a dynamic ocean through diverse and novel modeling approaches.

Monitoring and Prediction of Phytoplankton Dynamics in the North Sea

Monitoring and Prediction of Phytoplankton Dynamics in the North Sea PDF Author:
Publisher:
ISBN: 9789462597723
Category :
Languages : en
Pages : 232

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Investigating Drivers of Phytoplankton Blooms in the North Atlantic Ocean Using High-resolution in Situ Glider Data

Investigating Drivers of Phytoplankton Blooms in the North Atlantic Ocean Using High-resolution in Situ Glider Data PDF Author: Anna Sergeevna Rumyantseva
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Phytoplankton Variability and Climate

Phytoplankton Variability and Climate PDF Author: Hayley Evers-King
Publisher:
ISBN:
Category :
Languages : en
Pages : 62

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Physical Influences on Phytoplankton Ecology

Physical Influences on Phytoplankton Ecology PDF Author: Sophie A. Clayton
Publisher:
ISBN:
Category : Marine biodiversity
Languages : en
Pages : 154

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Book Description
The physical environment in the oceans dictates not only how phytoplankton cells are dispersed and their populations intermingled, but also mediates the supply of nutrients to the surface mixed layer. In this thesis I explore both of these aspects of the interaction between phytoplankton ecology and ocean physics, and have approached this topic in two distinct but complementary ways, working with a global ocean ecosystem model, and collecting data at sea. In the first half of the thesis, I examine the role of mesoscale physical features in shaping phytoplankton community structure and influencing rates of primary production. I compare the output of a complex marine ecosystem model coupled to coarse resolution and eddy-permitting physical models. Explicitly resolving eddies resulted in marked regional variations in primary production, zooplankton and phytoplankton biomass. The same phytoplankton phenotypes persisted in both cases, and were dominant in the same regions. Global phytoplankton diversity was unchanged. However, levels of local phytoplankton diversity were markedly different, with a large increase in local diversity in the higher resolution model. Increased diversity could be attributed to a combination of enhanced dispersal, environmental variability and nutrient supply in the higher resolution model. Diversity "hotspots" associated with western boundary currents and coastal upwelling zones are sustained through a combination of all of these factors. In the second half of the thesis I describe the results of a fine scale ecological and biogeochemical survey of the Kuroshio Extension Front. I found fine scale patterns in physical, chemical and biological properties that can be linked back to both the large scale horizontal and smaller scale vertical physical dynamics of the study region. A targeted genomic analysis of samples focused on the ecology of the picoeukaryote Ostreococcus clade distributions strongly supports the model derived hypotheses about the mechanisms supporting diversity hotspots. Strikingly, two distinct clades of Ostreococcus co-occur in more than half of the samples. A "hotspot" of Ostreococcus diversity appears to be supported by a confluence of water masses containing either clade, as well as a local nutrient supply at the front and the mesoscale variability of the region.

Exploring Light Controls on Phytoplankton Community Structure and the Biogeochemistry of the Ross Sea, Antarctica

Exploring Light Controls on Phytoplankton Community Structure and the Biogeochemistry of the Ross Sea, Antarctica PDF Author: Lindsey Rae Kropuenske
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
The Southern Ocean is one of the most important regions on Earth for absorption of anthropogenic carbon dioxide (CO2) from the atmosphere and long-term storage of that carbon in deep water and ocean sediments. While a significant amount of CO2 enters the deep ocean in this region along oceanographic fronts through the solubility pump, large seasonal phytoplankton blooms form on the Antarctic continental shelf and suggest that the biological pump also plays an important, and possibly underestimated, role in the oceanic sequestration of atmospheric CO2. This dissertation investigates the mechanisms by which light may control phytoplankton species distributions in one of the most productive areas of the Antarctic continental shelf, the Ross Sea. The Ross Sea is commonly dominated by two major phytoplankton species, diatoms, and the haptophyte, Phaeocystis antarctica. The distributions of these species are often correlated with different mixed layer environments, with diatoms dominating shallow mixed layers and P. antarctica dominating deeper mixed layers. Using a series of laboratory experiments, differences were assessed between P. antarctica and the common Ross Sea diatom, Fragilariopsis cylindrus, in their capacity for xanthophyll cycle photoprotection (Chapter 2). This was followed by chemical inhibition experiments that quantified the relative important of xanthophyll cycle photoprotection and the repair of photodamage for maintaining photosynthetic performance in each species. F. cylindrus produced significantly higher concentrations of xanthophyll cycle pigment and epoxidation of activated pigment (diatoxanthin epoxidation to diadinoxanthin) occurred much more slowly upon transition to low light than in P. antarctica. Although both species relied on xanthophyll cycle photoprotection to avoid photoinhibition and maintain maximal photosynthetic rates, P. antarctica was much more adversely affected when repair of photodamage was inhibited. Differences between species in strategies and rates of photoacclimation were also assessed (Chapter 3). F. cylindrus acclimated to shifts in irradiance by adjusting photosynthetic efficiency, with large changes in the functional absorption cross-section of photosystem two ([sigma]PSII) inferred from physiological measurements. P. antarctica exhibited significant changes in both photosynthetic efficiency and the maximum capacity for photosynthesis following shifts in irradiance. Changes in both [sigma]PSII and the number photosynthetic reaction centers or their maximum turnover rate were inferred from physiological measurements. Light was also found to play an important role in controlling elemental ratios in F. cylindrus and P. antarctica (Chapter 4). Particulate organic carbon to nitrogen to phosphorus ratios (C:N:P) varied as a function of growth irradiance in both species, but significant differences between species grown in identical conditions were also observed. F. cylindrus exhibited C:N:P ratios that were significantly lower than those of P. antarctica and often below the Redfield ratio, in agreement with observations from the Ross Sea. In contrast, P. antarctica exhibited ratios above the Redfield ratio when grown in all but very high light conditions. While protein, nucleic acid, and chlorophyll (Chl) concentrations explained the provenance of nearly 100% of particulate N in both species, nucleic acid concentrations were not sufficient to explain particulate P in either species. The remaining P could be partially accounted for if these species produce large concentrations of phospholipids, but storage of inorganic P most likely forms the largest cellular P-pool in nutrient replete cultures. Finally, data from the laboratory experiments were used to calculate phytoplankton growth rates in an ecosystem model of the Ross Sea to test the hypothesis that photophysiological differences between diatoms and P. antarctica can explain their distributions (Chapter 5). The phytoplankton growth model was modified from a previous steady-state model that included four physiological variables, the maximum quantum yield of photosynthesis ([phi]M), the irradiance at which [phi] = 1/2 [phi]M, the carbon to Chl ratio, and mean Chl-specific absorption. The parameters were allowed to vary as a function of mean mixed layer irradiance according to equations derived from laboratory data and acclimation rates measured in light shift experiments. Chl concentrations and distributions of P. antarctica and diatoms in the model agreed well with field observations, demonstrating that light is sufficient to explain phytoplankton community composition in the Ross Sea. These results also demonstrate that physiological information collected from ecologically relevant algal cultures can be used to understand and model phytoplankton dynamics in the natural environment.

Mathematical Modeling of Phytoplankton in Lake Ontario: Simulations using Lake 1 model

Mathematical Modeling of Phytoplankton in Lake Ontario: Simulations using Lake 1 model PDF Author: Robert V. Thomann
Publisher:
ISBN:
Category : Ontario, Lake (N.Y. and Ont.)
Languages : en
Pages : 104

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