Plant Transposable Elements

Plant Transposable Elements PDF Author: Jungnam Cho
Publisher: Humana
ISBN: 9781071611364
Category : Science
Languages : en
Pages : 272

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Book Description
This volume details the most up-to-date technologies used in plant transposable element studies and provides easy-to-follow protocols. Chapters guide readers on available database resources, annotation of different families of transposon, and experimental methods to detect their transposition intermediates, neo-transposed DNAs, and transposition events. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Plant Transposable Elements: Methods and Protocols aims to provide web-lab and dry-lab methodologies targeted at various levels from beginner to experienced.

Plant Transposable Elements

Plant Transposable Elements PDF Author: Jungnam Cho
Publisher: Humana
ISBN: 9781071611364
Category : Science
Languages : en
Pages : 272

Get Book Here

Book Description
This volume details the most up-to-date technologies used in plant transposable element studies and provides easy-to-follow protocols. Chapters guide readers on available database resources, annotation of different families of transposon, and experimental methods to detect their transposition intermediates, neo-transposed DNAs, and transposition events. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Plant Transposable Elements: Methods and Protocols aims to provide web-lab and dry-lab methodologies targeted at various levels from beginner to experienced.

Evolution and Impact of Transposable Elements

Evolution and Impact of Transposable Elements PDF Author: Pierre Capy
Publisher: Springer Science & Business Media
ISBN: 9780792346906
Category : Science
Languages : en
Pages : 366

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Book Description
During the last 50 years, the perception oftransposable elements (TEs) has changed considerably from selfish DNA to sequences that may contribute significantly to genome function and evolution. The recent increased interest in TEs is based on the realization that they are a major genetic component (at least 10--20%) of all organisms and a major contributor to the mutation process. It is currently estimated that 70--80% of spontaneous mutations are the result of TE-mediated insertions, deletions, or chromosomal rearrangements. Thus, it seems at least plausible that TEs may playa significant role in the adaptation and evolution of natural populations and species. The ubiquity of TEs suggests that they are an old component of genomes which have been vertically transmitted through generations over evolutionary time. However, detailed analyses carried out over the last 20 years have revealed several unusual features of TE evolution: (i) TEs can be horizontally transferred between species; (ii) TE evolutionary rates can be dramatically increased by specific inactivation processes, such as the RIP (Repeat Induced Point mutation) mechanism in fungi; (iii) TEs can influence the regulation of other TEs by insertion or deletion; (iv) different classes of TEs in even distantly related species can be remarkably similar in both structure and function.

The Maize Genome

The Maize Genome PDF Author: Jeffrey Bennetzen
Publisher: Springer
ISBN: 3319974270
Category : Science
Languages : en
Pages : 390

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Book Description
This book discusses advances in our understanding of the structure and function of the maize genome since publication of the original B73 reference genome in 2009, and the progress in translating this knowledge into basic biology and trait improvement. Maize is an extremely important crop, providing a large proportion of the world’s human caloric intake and animal feed, and serving as a model species for basic and applied research. The exceptionally high level of genetic diversity within maize presents opportunities and challenges in all aspects of maize genetics, from sequencing and genotyping to linking genotypes to phenotypes. Topics covered in this timely book range from (i) genome sequencing and genotyping techniques, (ii) genome features such as centromeres and epigenetic regulation, (iii) tools and resources available for trait genomics, to (iv) applications of allele mining and genomics-assisted breeding. This book is a valuable resource for researchers and students interested in maize genetics and genomics.

The Discovery and Characterization of Transposable Elements

The Discovery and Characterization of Transposable Elements PDF Author: Barbara McClintock
Publisher: Routledge
ISBN: 9780824013912
Category : Religion
Languages : en
Pages : 635

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Book Description
The introduction was written by Barbara McClintock to show how the concept of transposable elements evolved, and to comment on subsequent investigations of these elements. The papers in this volume were selected because of their relevance to this topic. For the discovery of "Mobile genetic elements" she received the Nobel Prize for Physiology or Medicine in 1983.

Transposable Elements and Genome Evolution

Transposable Elements and Genome Evolution PDF Author: J. F. McDonald
Publisher: Springer Science & Business Media
ISBN: 9780792363064
Category : Medical
Languages : en
Pages : 314

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Book Description
Once considered merely `selfish' or `parasitic' DNA, transposable elements are today recognized as being of major biological significance. Not only are these elements a major source of mutation, they have contributed both directly and indirectly to the evolution of genome structure and function. On October 8-10, 1999, 100 molecular biologists and evolutionists representing 11 countries met on the campus of The University of Georgia in Athens for the inaugural Georgia Genetics Symposium. The topics of presentations ranged from how the elements themselves have evolved to the impact transposable elements have had on the evolution of their host genomes. The papers in this volume therefore represent state-of-the-art thinking, by leading world experts in the field, on the evolutionary significance of transposable elements.

Transposons and Retrotransposons

Transposons and Retrotransposons PDF Author: Jose Luis Garcia Perez
Publisher: Humana
ISBN: 9781493933709
Category : Medical
Languages : en
Pages : 0

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Book Description
This volume covers the latest protocols designed to identify and characterize TEs in genomes, ancient or recently inserted. Additionally, this book includes a series of protocols designed to understand how host genomes act to regulate the activity of TEs, from elegant genetic mobilization assays to key biochemical methods. Finally, this book also includes chapters that describe how TEs can be used for biotechnological applications. Written for the Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Transposons and Retrotransposons: Methods and Protocols aims to ensure successful results in the further study of this vital field.

Mobile DNA III

Mobile DNA III PDF Author: Michael Chandler
Publisher: John Wiley & Sons
ISBN: 1555819214
Category : Science
Languages : en
Pages : 1347

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Book Description
An exploration of the raw power of genetic material to refashion itself to any purpose... Virtually all organisms contain multiple mobile DNAs that can move from place to place, and in some organisms, mobile DNA elements make up a significant portion of the genome. Mobile DNA III provides a comprehensive review of recent research, including findings suggesting the important role that mobile elements play in genome evolution and stability. Editor-in-Chief Nancy L. Craig assembled a team of multidisciplinary experts to develop this cutting-edge resource that covers the specific molecular mechanisms involved in recombination, including a detailed structural analysis of the enzymes responsible presents a detailed account of the many different recombination systems that can rearrange genomes examines the tremendous impact of mobile DNA in virtually all organisms Mobile DNA III is valuable as an in-depth supplemental reading for upper level life sciences students and as a reference for investigators exploring new biological systems. Biomedical researchers will find documentation of recent advances in understanding immune-antigen conflict between host and pathogen. It introduces biotechnicians to amazing tools for in vivo control of designer DNAs. It allows specialists to pick and choose advanced reviews of specific elements and to be drawn in by unexpected parallels and contrasts among the elements in diverse organisms. Mobile DNA III provides the most lucid reviews of these complex topics available anywhere.

Transposable Elements

Transposable Elements PDF Author: Esra Galun
Publisher: Springer Science & Business Media
ISBN: 9401735824
Category : Nature
Languages : en
Pages : 342

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Book Description
OY (])PONEOYLI TOIA YTA IIOAAOI OKOEOJII Many fail to grasp what they have seen, and cannot judge what they have learned, ErKYPEOYLI OYL1E MA®ONTEE ITINOEKOYIT although they tell themselves they know. EQYTOJII L1E L10KEOYLI Heraclitus of Ephesus, 500 BC " ... everyone that is not speckled and C~T~v: N,;~, 'T,ji~ ,~~~N ,tuN '= spotted among the goats and brown among the sheep, that shall be counted ~~N N,n =,~, c~w=== c,m stolen with me." Genesis Chapter 30 From Heraclitus of Ephesus and later philosophers, we can deduce that observation of natural phenomena, even when keen and accurate, will not result in meaningful knowledge unless combined with analysis of the mind; just as analysis of the mind without acquaintance with natural phenomena will not suffice to grasp the perceivable world. Only familiarity with phenomena combined with mental analysis will lead to additional knowledge. The citation from Genesis, Chapter 30, is part of an unusual story. It tells how Jacob received, as payment for his service to Laban, the bulk of Laban's herds. By agreement, Jacob was to receive "only" the newborn speckled and spotted goats and the newborn brown sheep that differed completely from their parents. Did Jacob know that there was instability (transposable elements?) in the pigmentation of Laban's herd? It is reasonable to assume that Jacob combined his keen observation with analysis of his mind in order to predict the outcome: most of the newborns were indeed speckled, spotted or brown.

Genetics

Genetics PDF Author: Benjamin A. Pierce
Publisher:
ISBN: 9781464150845
Category : Genetics
Languages : en
Pages : 0

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Book Description
With Genetics: A Conceptual Approach, Pierce brings a master teacher's experiences to the introductory genetics textbook, clarifying this complex subject by focusing on the big picture of genetics concepts. The new edition features an emphasis on problem-solving and relevant applications, while incorporating the latest trends in genetics research.

The Dynamic Genome

The Dynamic Genome PDF Author: Antonio Fontdevila
Publisher: Oxford University Press
ISBN: 019954137X
Category : Science
Languages : en
Pages : 225

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Book Description
These novelties, among others, are examined in this book in relation to their general significance for evolution, emphasising their human relevance.