The Role of Protein Kinases in DNA Replication in Saccharomyces Cerevisiae

The Role of Protein Kinases in DNA Replication in Saccharomyces Cerevisiae PDF Author: S. Sweet
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
The initiation of DNA replication at the onset of S phase in eukaryotic cells is a critically important and tightly regulated process. Multiple origins of replication in the genome must be co-ordinately regulated such that duplication of the chromosomes is complete before cell division, whilst also ensuring that no sections of the DNA are over-replicated. In G1 phase of the cell cycle, a large 'pre-replicative complex' (pre-RC) forms at origins consisting of a hexameric Origin Recognition Complex (ORC) as well as Cdc6, Cdt1 and another hexameric complex known as the Minichromosome Maintenance (MCM) complex. At the onset of S phase, two cell cycle regulated protein kinases, the Cyclin Dependent Kinase (CDK) and Cdc7, are activated. Phosphorylation of various proteins by these two enzymes triggers formation of large 'replisome' complexes, initiation of DNA replication from each origin, and disassembly of the pre-RCs. Pre-RC re-assembly is subsequently inhibited until kinase activity falls again after cell division. In this study, we have set about identifying substrates of both CDK and Cdc7 involved in DNA replication in the budding yeast Saccharomyces cerevisiae. Two techniques are employed, the in vitro phosphorylation of arrays of peptides and phosphorylation of pre-RCs assembled in cell-free yeast extracts. Peptide arrays provide a high throughput technique for screening large numbers of potential substrates in a single experiment, whilst pre-RC phosphorylation allows consideration of both tertiary and quaternary structures of the in vivo kinase substrate. Several potential novel substrates of both CDK and Cdc7 are revealed. Pre-RC phosphorylation also reveals a previously unreported phosphorylation of Orc1 by a third kinase which has been identified as Casein Kinase II (CKII).

The Role of Protein Kinases in DNA Replication in Saccharomyces Cerevisiae

The Role of Protein Kinases in DNA Replication in Saccharomyces Cerevisiae PDF Author: S. Sweet
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
The initiation of DNA replication at the onset of S phase in eukaryotic cells is a critically important and tightly regulated process. Multiple origins of replication in the genome must be co-ordinately regulated such that duplication of the chromosomes is complete before cell division, whilst also ensuring that no sections of the DNA are over-replicated. In G1 phase of the cell cycle, a large 'pre-replicative complex' (pre-RC) forms at origins consisting of a hexameric Origin Recognition Complex (ORC) as well as Cdc6, Cdt1 and another hexameric complex known as the Minichromosome Maintenance (MCM) complex. At the onset of S phase, two cell cycle regulated protein kinases, the Cyclin Dependent Kinase (CDK) and Cdc7, are activated. Phosphorylation of various proteins by these two enzymes triggers formation of large 'replisome' complexes, initiation of DNA replication from each origin, and disassembly of the pre-RCs. Pre-RC re-assembly is subsequently inhibited until kinase activity falls again after cell division. In this study, we have set about identifying substrates of both CDK and Cdc7 involved in DNA replication in the budding yeast Saccharomyces cerevisiae. Two techniques are employed, the in vitro phosphorylation of arrays of peptides and phosphorylation of pre-RCs assembled in cell-free yeast extracts. Peptide arrays provide a high throughput technique for screening large numbers of potential substrates in a single experiment, whilst pre-RC phosphorylation allows consideration of both tertiary and quaternary structures of the in vivo kinase substrate. Several potential novel substrates of both CDK and Cdc7 are revealed. Pre-RC phosphorylation also reveals a previously unreported phosphorylation of Orc1 by a third kinase which has been identified as Casein Kinase II (CKII).

The Role of Protein Kinases in DNA Replication in Saccaromyces Cerevisiae

The Role of Protein Kinases in DNA Replication in Saccaromyces Cerevisiae PDF Author:
Publisher:
ISBN:
Category :
Languages : en
Pages : 670

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Localization of Cdc7 Protein Kinase During DNA Replication in Saccharomyces Cerevisiae

Localization of Cdc7 Protein Kinase During DNA Replication in Saccharomyces Cerevisiae PDF Author: Daniel C. Rossbach
Publisher:
ISBN: 9780355292657
Category : DNA replication
Languages : en
Pages : 171

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Book Description
Dbf4-Dependent Kinase (DDK) is a conserved serine-threonine protein kinase essential for initiation of DNA replication during S phase of the cell cycle. DDK is composed of a regulatory subunit, Dbf4, and a catalytic subunit, Cdc7, and is required throughout S phase to initiate replication at origins by phosphorylating residues within the Mcm2-7 helicase. While the biological significance of DDK, including kinase activity, substrates, and protein expression has been well characterized, the molecular mechanism through which the kinase associates with chromatin is still unclear. Cdc7 is expressed and bound to chromatin throughout the cell cycle, but there has been little empirical evidence to determine where Cdc7 binds within the genome and more specifically whether it binds directly to origins of replication. The Dbf4 regulatory subunit of DDK has been shown to directly interact with origins of replication, according to one-hybrid screens and chromatin immunoprecipitation with G1-arrested cells. Using a variety of biochemical and genetic techniques, this study begins to identify where Cdc7 is bound within the Saccharomyces cerevisiae genome. Due to its role in phosphorylating the MCM helicase at origins of replication, we hypothesized that the Cdc7 catalytic subunit of DDK is bound to chromatin primarily at origins of replication in a manner that depends on association with the Dbf4 regulatory subunit. The Calling Cards method demonstrates that Cdc7 kinase does not solely bind origins of replication, but rather binds to chromatin across the genome. Furthermore, a point mutation in Cdc7 that renders the kinase inactive was found to have a higher binding affinity than wild-type. A 55 amino acid C-terminal truncation no longer binds Dbf4 and reduces the amount of Cdc7 bound to chromatin, suggesting that Dbf4 potentiates the ability of Cdc7 to bind chromatin. Additionally, Cdc7 is bound near functional and non-functional ACS sites. Chromatin immunoprecipitation experiments show that association of Cdc7 kinase with origins of replication changes throughout the cell cycle. We conclude our results suggest the role of Cdc7 to phosphorylate the MCM helicase does not depend on localization directly at origins of replication, but rather the quantity of Cdc7 bound to chromatin as a result of binding to the Dbf4 regulatory subunit.

Molecular Biology of the Cell

Molecular Biology of the Cell PDF Author:
Publisher:
ISBN: 9780815332183
Category : Cells
Languages : en
Pages : 0

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The Cell Cycle Regulation and Function of the Saccharomyces Cerevisiae Cdc7 Protein Kinase Involved in Mitotic DNA Replication

The Cell Cycle Regulation and Function of the Saccharomyces Cerevisiae Cdc7 Protein Kinase Involved in Mitotic DNA Replication PDF Author: Aimee Lynn Brown Jackson
Publisher:
ISBN:
Category :
Languages : en
Pages : 308

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Regulation of Homologous Recombinational DNA Repair by DNA Damage and Replication Block Checkpoints in Saccharomyces Cerevisiae

Regulation of Homologous Recombinational DNA Repair by DNA Damage and Replication Block Checkpoints in Saccharomyces Cerevisiae PDF Author: Edwin Haghnazari
Publisher:
ISBN:
Category :
Languages : en
Pages : 420

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Cell-cycle Regulation by Cdk1 in Saccharomyces Cerevisiae

Cell-cycle Regulation by Cdk1 in Saccharomyces Cerevisiae PDF Author: Jeffrey A. Ubersax
Publisher:
ISBN:
Category : Cyclin-dependent kinases
Languages : en
Pages : 334

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The Saccharomyces Cerevisiae CDC7 Protein Kinase, a Potential Link Between START and the Initiation of DNA Replication

The Saccharomyces Cerevisiae CDC7 Protein Kinase, a Potential Link Between START and the Initiation of DNA Replication PDF Author: Hye-Joo Yoon
Publisher:
ISBN:
Category :
Languages : en
Pages : 278

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Regulation of the Saccharomyces Cerevisiae DNA Replication Protein Cdc6p by the Cyclin Dependent Kinases

Regulation of the Saccharomyces Cerevisiae DNA Replication Protein Cdc6p by the Cyclin Dependent Kinases PDF Author: Suzanne Elsasser
Publisher:
ISBN:
Category :
Languages : en
Pages : 318

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Cell Cycle Control

Cell Cycle Control PDF Author: Michele Pagano
Publisher: Springer Science & Business Media
ISBN: 3540696865
Category : Science
Languages : en
Pages : 248

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Book Description
Addressing the regulation of the eukaryotic cell cycle, this book brings together experts to cover all aspects of the field, clearly and unambiguously, delineating what is commonly accepted in the field from the problems that remain unsolved. It will thus appeal to a large audience: basic and clinical scientists involved in the study of cell growth, differentiation, senescence, apoptosis, and cancer, as well as graduates and postgraduates.