The Ontology of Physics for Biology

The Ontology of Physics for Biology PDF Author: Daniel L. Cook
Publisher: CRC Press
ISBN: 0429892330
Category : Science
Languages : en
Pages : 241

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Book Description
This book introduces semantic representations of multiscale, multidomain physiological systems that link to qualitative reasoning and to quantitative analysis of biophysical processes in health and disease. Two major public health problems, diabetes and hypertension, serve as use-cases to illustrate the depth and rigor of such representations for logical inference and quantitative analysis. Central to this approach is the Ontology of Physics for Biology (OPB) that formally represents the foundations of classical physics and engineering system dynamics that are the basis for our understanding of biomedical entities, processes, and functional relationships. Furthermore, we introduce OPB-based software for annotating and abstracting available biosimulation models for reuse, recombination, and for archiving of physics-based biomedical knowledge. We have formalized and leveraged physics-based biological knowledge as a working view of physiology and biophysics from three distinct perspectives: (1) biologists and biomedical investigators, (2) biophysicists and bioengineers, and (3) biomedical ontologists and informaticists. We present a logical and intuitive semantics of classical physics as a tool for mediating and translating biophysical knowledge among biomedical domains. Daniel L. Cook, MD, PhD John H. Gennari, PhD Maxwell L. Neal, PhD

The Ontology of Physics for Biology

The Ontology of Physics for Biology PDF Author: Daniel L. Cook
Publisher: CRC Press
ISBN: 0429892330
Category : Science
Languages : en
Pages : 241

Get Book Here

Book Description
This book introduces semantic representations of multiscale, multidomain physiological systems that link to qualitative reasoning and to quantitative analysis of biophysical processes in health and disease. Two major public health problems, diabetes and hypertension, serve as use-cases to illustrate the depth and rigor of such representations for logical inference and quantitative analysis. Central to this approach is the Ontology of Physics for Biology (OPB) that formally represents the foundations of classical physics and engineering system dynamics that are the basis for our understanding of biomedical entities, processes, and functional relationships. Furthermore, we introduce OPB-based software for annotating and abstracting available biosimulation models for reuse, recombination, and for archiving of physics-based biomedical knowledge. We have formalized and leveraged physics-based biological knowledge as a working view of physiology and biophysics from three distinct perspectives: (1) biologists and biomedical investigators, (2) biophysicists and bioengineers, and (3) biomedical ontologists and informaticists. We present a logical and intuitive semantics of classical physics as a tool for mediating and translating biophysical knowledge among biomedical domains. Daniel L. Cook, MD, PhD John H. Gennari, PhD Maxwell L. Neal, PhD

Everything Flows

Everything Flows PDF Author: Daniel J. Nicholson
Publisher: Oxford University Press
ISBN: 0198779631
Category : Philosophy
Languages : en
Pages : 403

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Book Description
"The majority of the papers herein originated at the workshop 'Process Philosophy of Biology' ... held in Exeter in November 2014."--Page vii.

Physics

Physics PDF Author: Wolfgang Smith
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

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Book Description


Philosophy of Science

Philosophy of Science PDF Author: Yuri Balashov
Publisher: Psychology Press
ISBN: 9780415257817
Category : Philosophy
Languages : en
Pages : 544

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Book Description
This comprehensive anthology draws together writings by leading philosophers of science and will prove invaluable for any philosophy of science course.

Philosophy of Science

Philosophy of Science PDF Author:
Publisher:
ISBN:
Category : Culture
Languages : en
Pages : 603

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Ontological Information

Ontological Information PDF Author: Roman Krzanowski
Publisher:
ISBN: 9789811248825
Category : Information theory
Languages : en
Pages : 0

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Book Description
"This book is about the nature of information. It touches on many core issues of philosophy of the mind, ontology, and epistemology, and draws in several domain-specific concepts from physics, mathematics, thermodynamics, computer science, and biology. The terms used in this book, such as the mind, a conscious agent, meaning, and knowledge are used with very precise meanings because they can be easily misinterpreted. A proper understanding of these terms can be gained from the referenced literature. But more specifically, this book is about the concept of information as physical phenomenon. The book is a unique exposition of the concept of information as physical phenomenon. It provides the detailed analysis and synthesis of the current conceptualizations of information demonstrating the lack of common definition and their incompleteness. The detailed argument is provided why information may be defined as a physical phenomenon and why this type of information may be seen as fundamental to our understanding of this concept"--

Quantum Mind and Social Science

Quantum Mind and Social Science PDF Author: Alexander Wendt
Publisher: Cambridge University Press
ISBN: 1107082544
Category : Philosophy
Languages : en
Pages : 367

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Book Description
A unique contribution to the understanding of social science, showing the implications of quantum physics for the nature of human society.

Physics of Life

Physics of Life PDF Author: Clas Blomberg
Publisher: Elsevier
ISBN: 0080554644
Category : Science
Languages : en
Pages : 437

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Book Description
The purpose of the book is to give a survey of the physics that is relevant for biological applications, and also to discuss what kind of biology needs physics. The book gives a broad account of basic physics, relevant for the applications and various applications from properties of proteins to processes in the cell to wider themes such as the brain, the origin of life and evolution. It also considers general questions of common interest such as reductionism, determinism and randomness, where the physics view often is misunderstood. The subtle balance between order and disorder is a repeated theme appearing in many contexts. There are descriptive parts which shall be sufficient for the comprehension of general ideas, and more detailed, formalistic parts for those who want to go deeper, and see the ideas expressed in terms of mathematical formulas. - Describes how physics is needed for understanding basic principles of biology- Discusses the delicate balance between order and disorder in living systems - Explores how physics play a role high biological functions, such as learning and thinking

Color Ontology and Color Science

Color Ontology and Color Science PDF Author: Jonathan Cohen
Publisher: MIT Press
ISBN: 0262013851
Category : Medical
Languages : en
Pages : 457

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Book Description
Leading philosophers and scientists consider what conclusions about color can be drawn when the latest analytic tools are applied to the most sophisticated color science.Philosophers and scientists have long speculated about the nature of color. Atomists such as Democritus thought color to be "conventional," not real; Galileo and other key figures of the Scientific Revolution thought that it was an erroneous projection of our own sensations onto external objects. More recently, philosophers have enriched the debate about color by aligning the most advanced color science with the most sophisticated methods of analytical philosophy. In this volume, leading scientists and philosophers examine new problems with new analytic tools, considering such topics as the psychophysical measurement of color and its implications, the nature of color experience in both normal color-perceivers and the color blind, and questions that arise from what we now know about the neural processing of color information, color consciousness, and color language. Taken together, these papers point toward a complete restructuring of current orthodoxy concerning color experience and how it relates to objective reality. Kuehni, Jameson, Mausfeld, and Niederee discuss how the traditional framework of a three-dimensional color space and basic color terms is far too simple to capture the complexities of color experience. Clark and MacLeod discuss the difficulties of a materialist account of color experience. Churchland, Cohen, Matthen, and Westphal offer competing accounts of color ontology. Finally, Broackes and Byrne and Hilbert discuss the phenomenology of color blindness.Contributors Justin Broackes, Alex Byrne, Paul M. Churchland, Austen Clark, Jonathan Cohen, David R. Hilbert, Kimberly A. Jameson, Rolf Kuehni, Don I.A. MacLeod, Mohan Matthen, Rainer Mausfeld, Richard Niederée, Jonathan Westphal

Philosophy of Science

Philosophy of Science PDF Author: Alexander Rosenberg
Publisher: Psychology Press
ISBN: 041515281X
Category : Philosophy
Languages : en
Pages : 202

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Book Description
Identifies the philosophical problems that science raises through an examination of questions about its nature, methods and justification. A valuable introduction for science and philosophy students alike.