Symbolic Approaches to Modeling and Analysis of Biological Systems

Symbolic Approaches to Modeling and Analysis of Biological Systems PDF Author: Cedric Lhoussaine
Publisher: John Wiley & Sons
ISBN: 1789450292
Category : Computers
Languages : en
Pages : 404

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Book Description

Symbolic Approaches to Modeling and Analysis of Biological Systems

Symbolic Approaches to Modeling and Analysis of Biological Systems PDF Author: Cedric Lhoussaine
Publisher: John Wiley & Sons
ISBN: 1789450292
Category : Computers
Languages : en
Pages : 404

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Book Description


Symbolic Approaches to Modeling and Analysis of Biological Systems

Symbolic Approaches to Modeling and Analysis of Biological Systems PDF Author: Cedric Lhoussaine
Publisher: John Wiley & Sons
ISBN: 1394229070
Category : Computers
Languages : en
Pages : 404

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Book Description
Systems Biology is an approach to biology that involves understanding the complexity of interactions among biological entities within a systemic whole. The goal is to understand the emergence of physiological or functional properties. Symbolic Approaches to Modeling and Analysis of Biological Systems presents contributions of formal methods from computer science for modeling the dynamics of biological systems. It deals more specifically with symbolic methods, i.e. methods that can establish the qualitative properties of models. This book presents different approaches related to semantics, language, modeling and their link with data, and allows us to examine the fundamental problems and challenges that biological systems are facing. The first part of the book presents works that rely on various available data to build models, while the second part gathers contributions surrounding issues of semantics and formal methods.

Algebraic Biology

Algebraic Biology PDF Author: Hirokazu Anai
Publisher: Springer Science & Business Media
ISBN: 3540734325
Category : Computers
Languages : en
Pages : 389

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Book Description
"This volume constitutes the refereed proceedings of the Second International Conference on Algebraic Biology, held at the Castle of Hagenberg, Austria in July 2007. The conference was run as part of the Research Institute for Symbolic Computation (RISC) Summer 2007. Nineteen full papers are presented, together with three invited papers and four tutorials. Each paper has been carefully reviewed by the book's team of expert editors to ensure each one meets the highest standards of research and scholarship. The conference served as an interdisciplinary forum for the presentation of research on all aspects of the application of symbolic computation in biology, including computer algebra, computational logic, and related methods. Papers also examine solutions to problems in biology using symbolic methods."--Publisher's website.

Computational Methods in Systems Biology

Computational Methods in Systems Biology PDF Author: Corrado Priami
Publisher: Springer Science & Business Media
ISBN: 3540006052
Category : Computers
Languages : en
Pages : 224

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Book Description
Rovereto,December2002 CorradoPriami ProgrammeCommitteeofCMSB 2003 CorradoPriami(Chair),UniversityofTrento(Italy), CharlesAu?ray,CNRS,Villejuif(France), CosimaBaldari,Universit`adiSiena(Italy), AlexanderBockmayr,Universit ́eHenriPoincar ́e(France), LucaCardelli,MicrosoftResearchCambridge(UK), VincentDanos,Universit ́eParisVII(France), PierpaoloDegano,Universitad ` iPisa(Italy), Francois ̧ Fages,INRIA,Rocquencourt(France), DrabløsFinn,NorwegianUniversityofScienceandTechnology,Trondheim(N- way), MonikaHeiner,BrandenburgUniversityofTechnologyatCottbus(Germany), InaKoch,UniversityofAppliedSciencesBerlin,(Germany), JohnE.

ICTERI 2021 Workshops

ICTERI 2021 Workshops PDF Author: Oleksii Ignatenko
Publisher: Springer Nature
ISBN: 303114841X
Category : Education
Languages : en
Pages : 575

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Book Description
This book contains the workshops papers presented at the 17th International Conference on Information and Communication Technologies in Education, Research, and Industrial Applications, ICTERI 2021, held in Kherson, Ukraine, in September-October 2021. The 33 revised full papers and 4 short papers included in this volume were carefully reviewed and selected from 105 initial submissions. The papers are organized according to the following workshops: ​9th International Workshop on Information Technology in Economic Research (ITER 2021); 5th International Workshop on Methods, Resources and Technologies for Open Learning and Research (MROL 2021); International Workshop RMSEBT 2021: Rigorous Methods in Software Engineering and Blockchain Technologies; 7th International Workshop on Theory of Reliability and Markov Modeling for Information Technologies (TheRMIT 2021); 1st Ukrainian Natural Language Processing Workshop (UNLP 2021).

Programming Languages with Applications to Biology and Security

Programming Languages with Applications to Biology and Security PDF Author: Chiara Bodei
Publisher: Springer
ISBN: 3319255274
Category : Computers
Languages : en
Pages : 386

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Book Description
This Festschrift volume is published in honor of Pierpaolo Degano on the occasion of his 65th birthday and is the outcome of a colloquium held in Pisa, Italy, in June 2015. Pierpaolo Degano has worked on a large variety of topics including formal program semantics, concurrency theory, systems biology and security. The volume contains 22 refereed papers and one extended abstract, including personal memoirs and regular research papers by close collaborators and friends and a laudatio illustrating his distinguished career and his main scientific contributions. The papers deal with the main research topics explored by Pierpaolo Degano and those still under his investigation.

The Cambridge Handbook of Computational Psychology

The Cambridge Handbook of Computational Psychology PDF Author: Ron Sun
Publisher: Cambridge University Press
ISBN: 0521674107
Category : Computers
Languages : en
Pages : 767

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Book Description
A cutting-edge reference source for the interdisciplinary field of computational cognitive modeling.

Modeling Life

Modeling Life PDF Author: Alan Garfinkel
Publisher: Springer
ISBN: 3319597310
Category : Mathematics
Languages : en
Pages : 456

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Book Description
This book develops the mathematical tools essential for students in the life sciences to describe interacting systems and predict their behavior. From predator-prey populations in an ecosystem, to hormone regulation within the body, the natural world abounds in dynamical systems that affect us profoundly. Complex feedback relations and counter-intuitive responses are common in nature; this book develops the quantitative skills needed to explore these interactions. Differential equations are the natural mathematical tool for quantifying change, and are the driving force throughout this book. The use of Euler’s method makes nonlinear examples tractable and accessible to a broad spectrum of early-stage undergraduates, thus providing a practical alternative to the procedural approach of a traditional Calculus curriculum. Tools are developed within numerous, relevant examples, with an emphasis on the construction, evaluation, and interpretation of mathematical models throughout. Encountering these concepts in context, students learn not only quantitative techniques, but how to bridge between biological and mathematical ways of thinking. Examples range broadly, exploring the dynamics of neurons and the immune system, through to population dynamics and the Google PageRank algorithm. Each scenario relies only on an interest in the natural world; no biological expertise is assumed of student or instructor. Building on a single prerequisite of Precalculus, the book suits a two-quarter sequence for first or second year undergraduates, and meets the mathematical requirements of medical school entry. The later material provides opportunities for more advanced students in both mathematics and life sciences to revisit theoretical knowledge in a rich, real-world framework. In all cases, the focus is clear: how does the math help us understand the science?

Hybrid Systems Biology

Hybrid Systems Biology PDF Author: Alessandro Abate
Publisher: Springer
ISBN: 331926916X
Category : Computers
Languages : en
Pages : 256

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Book Description
This book constitutes the thoroughly referred post-workshop proceedings of the 4th International Workshop on Hybrid Systems biology, HSB 2015, held as part of the Madrid Meet 2015 event, in Madrid, Spain in September 2015. The volume presents 13 full papers together with 2 abstracts of invited sessions from 18 submissions. The scope of the HSB workshop is the general area of dynamical models in Biology with an emphasis on hybrid approaches — by no means restricted to a narrow class of mathematical models — and taking advantage of techniques developed separately in different areas.

A Systems Theoretic Approach to Systems and Synthetic Biology I: Models and System Characterizations

A Systems Theoretic Approach to Systems and Synthetic Biology I: Models and System Characterizations PDF Author: Vishwesh V. Kulkarni
Publisher: Springer
ISBN: 9401790418
Category : Medical
Languages : en
Pages : 338

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Book Description
The complexity of biological systems has intrigued scientists from many disciplines and has given birth to the highly influential field of systems biology wherein a wide array of mathematical techniques, such as flux balance analysis, and technology platforms, such as next generation sequencing, is used to understand, elucidate, and predict the functions of complex biological systems. More recently, the field of synthetic biology, i.e., de novo engineering of biological systems, has emerged. Scientists from various fields are focusing on how to render this engineering process more predictable, reliable, scalable, affordable, and easy. Systems and control theory is a branch of engineering and applied sciences that rigorously deals with the complexities and uncertainties of interconnected systems with the objective of characterising fundamental systemic properties such as stability, robustness, communication capacity, and other performance metrics. Systems and control theory also strives to offer concepts and methods that facilitate the design of systems with rigorous guarantees on these properties. Over the last 100 years, it has made stellar theoretical and technological contributions in diverse fields such as aerospace, telecommunication, storage, automotive, power systems, and others. Can it have, or evolve to have, a similar impact in biology? The chapters in this book demonstrate that, indeed, systems and control theoretic concepts and techniques can have a significant impact in systems and synthetic biology. Volume I provides a panoramic view that illustrates the potential of such mathematical methods in systems and synthetic biology. Recent advances in systems and synthetic biology have clearly demonstrated the benefits of a rigorous and systematic approach rooted in the principles of systems and control theory - not only does it lead to exciting insights and discoveries but it also reduces the inordinately lengthy trial-and-error process of wet-lab experimentation, thereby facilitating significant savings in human and financial resources. In Volume I, some of the leading researchers in the field of systems and synthetic biology demonstrate how systems and control theoretic concepts and techniques can be useful, or should evolve to be useful, in order to understand how biological systems function. As the eminent computer scientist Donald Knuth put it, "biology easily has 500 years of exciting problems to work on". This edited book presents but a small fraction of those for the benefit of (1) systems and control theorists interested in molecular and cellular biology and (2) biologists interested in rigorous modelling, analysis and control of biological systems.