Phylogeography

Phylogeography PDF Author: John C. Avise
Publisher: Harvard University Press
ISBN: 9780674666382
Category : History
Languages : en
Pages : 466

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Book Description
Phylogeography is a discipline concerned with various relationships between gene genealogies—phylogenetics—and geography. This book captures the conceptual and empirical richness of the field, and also the sense of genuine innovation that phylogeographic perspectives have brought to evolutionary studies.

Phylogeography of Southern European Refugia

Phylogeography of Southern European Refugia PDF Author: Steven Weiss
Publisher: Springer Science & Business Media
ISBN: 1402049048
Category : Science
Languages : en
Pages : 371

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Book Description
This book provides the first synthesis of the remarkable diversity, evolutionary complexity, and conservation importance of the flora and fauna in the Mediterranean region, with emphasis on the three major peninsular refugia. The book highlights biodiversity importance in Southern Europe for European biota conservation, and includes chapters from authorities in phylogeography: John Avise, Remy Petit, Ettore Randi.

Phylogeography of California

Phylogeography of California PDF Author: Kristina A. Schierenbeck
Publisher: Univ of California Press
ISBN: 0520278879
Category : Nature
Languages : en
Pages : 362

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Book Description
Phylogeography of California examines the evolution of a variety of taxaÑancient and recent, native and migratoryÑto elucidate evolutionary events both major and minor that shaped the distribution, radiation, and speciation of the biota of California. The book also interprets evolutionary history in a geological context and reviews new and emerging phylogeographic patterns. Focusing on a region that is defined by physical and political boundaries, Kristina A. Schierenbeck provides a phylogeographic survey of CaliforniaÕs diverse flora and fauna according to their major organismal groups. Life history and ecological characteristics, which play prominent roles in the various outcomes for respective clades, are also considered throughout the work. Supporting scholars and researchers who study evolutionary diversification, the book analyzes research that helps assess one of the major challenges in phylogeographic studies: understanding changes in population structures shaped by geological and geographical processes. California is one of only twenty-five acknowledged biological hotspots worldwide, and the phylogeographic history of the state can be extrapolated to study other regions in western North America. Further consideration is given to implications for conservation, recommendations concerning the biogeographic provinces that roughly define the state of California, and predictions related to climate change.

Relict Species

Relict Species PDF Author: Jan Christian Habel
Publisher: Springer Science & Business Media
ISBN: 3540921605
Category : Science
Languages : en
Pages : 444

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Book Description
Mankind has evolved both genetically and culturally to become a most successful and dominant species. But we are now so numerous and our technology is so p- erful that we are having major effects on the planet, its environment, and the b- sphere. For some years prophets have warned of the possible detrimental consequences of our activities, such as pollution, deforestation, and overfishing, and recently it has become clear that we are even changing the atmosphere (e. g. ozone, carbon dioxide). This is worrying since the planet’s life systems are involved and dependent on its functioning. Current climate change – global w arming – is one recognised consequence of this larger problem. To face this major challenge, we will need the research and advice of many disciplines – Physics, Chemistry, Earth Sciences, Biology, and Sociology – and particularly the commitment of wise politicians such as US Senator Al Gore. An important aspect of this global problem that has been researched for several decades is the loss of species and the impoverishment of our ecosystems, and hence their ability to sustain themselves, and more particularly us! Through evolutionary time new species have been generated and some have gone extinct. Such extinction and regeneration are moulded by changes in the earth’s crust, atmosphere, and resultant climate. Some extinctions have been massive, particularly those asso- ated with catastrophic meteoric impacts like the end of the Cretaceous Period 65Mya.

Phylogeography and Population Genetics in Crustacea

Phylogeography and Population Genetics in Crustacea PDF Author: Christoph Held
Publisher: CRC Press
ISBN: 1040187404
Category : Nature
Languages : en
Pages : 448

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Book Description
Recently, technological progress and the rise of DNA barcoding efforts have led to a significant increase in the availability of molecular datasets on intraspecific variability. Carcinologists and other organismal biologists, who want to use molecular tools to investigate patterns on the scale of populations, face a bewildering variety of genetic m

Seaweed Phylogeography

Seaweed Phylogeography PDF Author: Zi-Min Hu
Publisher: Springer
ISBN: 9401775346
Category : Science
Languages : en
Pages : 398

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Book Description
The book provides an overview of research on the remarkable diversity, adaptive genetic differentiation, and evolutionary complexity of intertidal macroalgae species. Through incorporating molecular data, ecological niche and model-based phylogeographic inference, this book presents the latest findings and hypotheses on the spatial distribution and evolution of seaweeds in the context of historical climate change (e.g. the Quaternary ice ages), contemporary global warming, and increased anthropogenic influences. The chapters in this book highlight past and current research on seaweed phylogeography and predict the future trends and directions. This book frames a number of research cases to review how biogeographic processes and interactive eco-genetic dynamics shaped the demographic histories of seaweeds, which furthermore enhances our understanding of speciation and diversification in the sea. Dr. Zi-Min Hu is an associate professor at Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China. Dr. Ceridwen Fraser is a senior lecturer at Fenner School of Environment and Society, Australian National University, Canberra, Australia.

Phylogeography and Population Genetics in Crustacea

Phylogeography and Population Genetics in Crustacea PDF Author: Christoph Held
Publisher: CRC Press
ISBN: 1439840741
Category : Nature
Languages : en
Pages : 397

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Book Description
Recently, technological progress and the rise of DNA barcoding efforts have led to a significant increase in the availability of molecular datasets on intraspecific variability. Carcinologists and other organismal biologists, who want to use molecular tools to investigate patterns on the scale of populations, face a bewildering variety of genetic m

Current Topics in Phylogenetics and Phylogeography of Terrestrial and Aquatic Systems

Current Topics in Phylogenetics and Phylogeography of Terrestrial and Aquatic Systems PDF Author: Kesara Anamthawat-Jónsson
Publisher: BoD – Books on Demand
ISBN: 9535102176
Category : Juvenile Nonfiction
Languages : en
Pages : 160

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Book Description
Mapping phylogenetics on geographical scales is one of the most important scientific aspects of bioscience research. Changes in the environment have evidently shaped the geographical distribution of organisms on land and in the oceans seen today. Overexploitation of key species has caused not only changes in the distribution and diversity of organisms and composition of the ecosystems, but is also leading to species extinction at accelerating rates. It is our duty as scientists to find ways of protecting the species endangered with extinction and preventing other species from entering the endangered stage. To manage this effectively, we need to map species distribution, understand life-history traits, define genetic variation within species and populations, identify lineages - especially at the molecular level - and correlate the historical, phylogenetic components with the spatial distributions of gene lineages. In this book, phylogenetics and phylogeography of a diverse range of organisms are reviewed: from microorganisms causing gastroenteritis in humans, fishes in the Southwest Atlantic Ocean and spiders of the western Indian Ocean, to mountain tapirs in South America and birch tree species of the Arctic tundra.

Historical and Oceanographic Influences on Phylogeography in the California Current Ecosystem and Applications to Management of Marine Species

Historical and Oceanographic Influences on Phylogeography in the California Current Ecosystem and Applications to Management of Marine Species PDF Author: Alison Jane Haupt
Publisher: Stanford University
ISBN:
Category :
Languages : en
Pages : 138

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Book Description
The overarching theme of my thesis is to explore patterns of larval dispersal as they relate to management of fished marine species. I employed a case study of two species: Megastraea undosa and Parastichopus parvimensis to investigate patterns of phylogeography and assess relative scales of dispersal for these two species which are fished in both California, USA and Baja California, MEX. To examine how some generalities for many species can be made for a specific geographic area, I reviewed all existing phylogeographic studies around Cape Mendocino, CA. Dispersal at a snail's pace: Strong genetic structure in the fisheries gastropod Megastaea undosa. Information about larval dispersal is necessary for effective management of fisheries. Population genetics are often employed to assess dispersal, but these data also carry artifacts from the evolutionary history of a species. I assessed historical and modern demography of the wavy top snail, Megastraea undosa, a marine snail that is fished in California, USA and Baja California, Mexico. Genetic structure at the COI mtDNA locus is strikingly high, with large shifts in haplotype frequencies between southern Baja and southern California. Coalescent-based modeling of genetic data suggests that the population has limited dispersal throughout the range and underwent a northward range expansion after the last glacial maximum. I conclude that both historical and contemporary processes affect observed patterns of phylogeography in M. undosa. Consideration of the evolutionary history of target species allows for a more accurate interpretation of genetic data for management. iv Subtle genetic structure in the commercially fished warty sea cucumber, Parastichopus parvimensis. The warty sea cucumber, P. parvimensis, is fished commercially in both California, USA and Baja California, Mexico but little is known about the status of the fisheries or if separate stocks exist. P. parvimensis has a long pelagic larval duration of 50-90 days, which may translate to high connectivity throughout the species range (Monterey, CA, USA to Bahía Asuncion, BCS, Mexico). I examined phylogeographic patterns at the COI mtDNA locus and five microsatellite loci throughout the range of P. parvimensis and was particularly interested in patterns associated with the potential phylogeographic barriers of Point Conception, CA, USA and Punta Eugenia, BCS, MEX. I found no structure associated with Point Conception, but subtle genetic structure at both types of loci for Punta Eugenia, which may be mechanistically explained by oceanographic patterns. These data have important implications for management of the sea cucumber fishery and indicate that populations south of Punta Eugenia likely do not receive biologically meaningful input of larvae from northern populations to supplement the local fishery. Concordant phylogeographic patterns associated with the major headland of Cape Mendocino in northern California. Most coastlines are non-linear and headlands such as Cape Mendocino may interact with oceanographic processes to create barriers to dispersal. Though Cape Mendocino is a prominent headland, it has been largely ignored in the phylogeographic literature, which focuses instead on Point Conception in southern California. I reviewed and synthesized phylogeographic studies that include sampling sites north and south of Cape Mendocino and discuss the v oceanography and topography of the cape as potential mechanistic drivers of larval dispersal patterns. Slightly more than half (24 out of 46) of the surveyed species that showed significant genetic structure around this headland, which suggests that this headland may be an important barrier to dispersal and may limit connectivity between northern and central California. If populations north of Cape Mendocino have higher connectivity with populations in Oregon than with those in central California, marine spatial planning must occur at a multi-state scale to reach marine conservation goals.

Evolution of the House Mouse

Evolution of the House Mouse PDF Author: Miloš Macholán
Publisher: Cambridge University Press
ISBN: 1139510320
Category : Science
Languages : en
Pages :

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Book Description
The house mouse is the source of almost all genetic variation in laboratory mice; its genome was sequenced alongside that of humans, and it has become the model for mammalian speciation. Featuring contributions from leaders in the field, this volume provides the evolutionary context necessary to interpret these patterns and processes in the age of genomics. The topics reviewed include mouse phylogeny, phylogeography, origins of commensalism, adaptation, and dynamics of secondary contacts between subspecies. Explorations of mouse behaviour cover the nature of chemical and ultrasonic signalling, recognition, and social environment. The importance of the mouse as an evolutionary model is highlighted in reviews of the first described example of meiotic drive (t-haplotype) and the first identified mammalian speciation gene (Prdm9). This detailed overview of house mouse evolution is a valuable resource for researchers of mouse biology as well as those interested in mouse genetics, evolutionary biology, behaviour, parasitology, and archaeozoology.