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Author: Qiang Cui
Publisher: CRC Press
ISBN: 142003507X
Category : Mathematics
Languages : en
Pages : 448
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Book Description
Rapid developments in experimental techniques continue to push back the limits in the resolution, size, and complexity of the chemical and biological systems that can be investigated. This challenges the theoretical community to develop innovative methods for better interpreting experimental results. Normal Mode Analysis (NMA) is one such technique
Author: Qiang Cui
Publisher: CRC Press
ISBN: 142003507X
Category : Mathematics
Languages : en
Pages : 448
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Book Description
Rapid developments in experimental techniques continue to push back the limits in the resolution, size, and complexity of the chemical and biological systems that can be investigated. This challenges the theoretical community to develop innovative methods for better interpreting experimental results. Normal Mode Analysis (NMA) is one such technique
Author: Alexander F. Vakakis
Publisher: Springer Science & Business Media
ISBN: 9401724520
Category : Science
Languages : en
Pages : 290
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Book Description
The nonlinear normal modes of a parametrically excited cantilever beam are constructed by directly applying the method of multiple scales to the governing integral-partial differential equation and associated boundary conditions. The effect of the inertia and curvature nonlin earities and the parametric excitation on the spatial distribution of the deflection is examined. The results are compared with those obtained by using a single-mode discretization. In the absence of linear viscous and quadratic damping, it is shown that there are nonlinear normal modes, as defined by Rosenberg, even in the presence of a principal parametric excitation. Furthermore, the nonlinear mode shape obtained with the direct approach is compared with that obtained with the discretization approach for some values of the excitation frequency. In the single-mode discretization, the spatial distribution of the deflection is assumed a priori to be given by the linear mode shape ¢n, which is parametrically excited, as Equation (41). Thus, the mode shape is not influenced by the nonlinear curvature and nonlinear damping. On the other hand, in the direct approach, the mode shape is not assumed a priori; the nonlinear effects modify the linear mode shape ¢n. Therefore, in the case of large-amplitude oscillations, the single-mode discretization may yield inaccurate mode shapes. References 1. Vakakis, A. F., Manevitch, L. I., Mikhlin, Y. v., Pilipchuk, V. N., and Zevin A. A., Nonnal Modes and Localization in Nonlinear Systems, Wiley, New York, 1996.
Author: Andreas Kukol
Publisher: Humana Press
ISBN: 9781493954919
Category : Science
Languages : en
Pages : 474
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Book Description
Molecular Modeling of Proteins, Second Edition provides a theoretical background of various methods available and enables non-specialists to apply methods to their problems by including updated chapters and new material not covered in the first edition. This detailed volume opens by featuring classical and advanced simulation methods as well as methods to set-up complex systems such as lipid membranes and membrane proteins and continues with chapters devoted to the simulation and analysis of conformational changes of proteins, computational methods for protein structure prediction, usage of experimental data in combination with computational techniques, as well as protein-ligand interactions, which are relevant in the drug design process. Written for the highly successful Methods in Molecular Biology series, chapters include thorough introductions, step-by-step instructions and notes on troubleshooting and avoiding common pitfalls. Update-to-date and authoritative, Molecular Modeling of Proteins, Second Edition aims to aid researchers in the physical, chemical and biosciences interested in utilizing this powerful technology.
Author: Nedjeljka Žagar
Publisher: Springer
ISBN: 9783030609627
Category : Mathematics
Languages : en
Pages : 318
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Book Description
This book reviews the theory and applications of the normal-mode functions in numerical weather prediction and weather and climate dynamics. The normal-mode functions, the eigensolutions of the linearized primitive equations describing the evolution of atmospheric winds and mass variables, have been used for a long time. They have played an important role in the development of data assimilation schemes and the initialization of numerical weather prediction models. Chapters also present how the normal modes can be applied to many theoretical and numerical problems in the atmospheric sciences, such as equatorial wave dynamics, baroclinic instability, energy transfers, and predictability across scales.
Author: Valerie Daggett
Publisher: Elsevier
ISBN: 0080493785
Category : Medical
Languages : en
Pages : 477
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Book Description
Protein Simulation focuses on predicting how protein will act in vivo. These studies use computer analysis, computer modeling, and statistical probability to predict protein function. * Force Fields* Ligand Binding* Protein Membrane Simulation* Enzyme Dynamics* Protein Folding and unfolding simulations
Author: E. Bright Wilson
Publisher: Courier Corporation
ISBN: 0486137155
Category : Science
Languages : en
Pages : 418
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Book Description
Pedagogical classic and essential reference focuses on mathematics of detailed vibrational analyses of polyatomic molecules, advancing from application of wave mechanics to potential functions and methods of solving secular determinant.
Author: Martin J. Field
Publisher: Cambridge University Press
ISBN: 1139465813
Category : Science
Languages : en
Pages : 294
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Book Description
Molecular simulation is a powerful tool in materials science, physics, chemistry and biomolecular fields. This updated edition provides a pragmatic introduction to a wide range of techniques for the simulation of molecular systems at the atomic level. The first part concentrates on methods for calculating the potential energy of a molecular system, with new chapters on quantum chemical, molecular mechanical and hybrid potential techniques. The second part describes methods examining conformational, dynamical and thermodynamical properties of systems, covering techniques including geometry-optimization, normal-mode analysis, molecular dynamics, and Monte Carlo simulation. Using Python, the second edition includes numerous examples and program modules for each simulation technique, allowing the reader to perform the calculations and appreciate the inherent difficulties involved in each. This is a valuable resource for researchers and graduate students wanting to know how to use atomic-scale molecular simulations. Supplementary material, including the program library and technical information, available through www.cambridge.org/9780521852524.
Author: Howard Georgi
Publisher: Addison Wesley Publishing Company
ISBN:
Category : Science
Languages : en
Pages : 442
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Book Description
The first complete introduction to waves and wave phenomena by a renowned theorist. Covers damping, forced oscillations and resonance; normal modes; symmetries; traveling waves; signals and Fourier analysis; polarization; diffraction.
Author: Mathias Harrer
Publisher: CRC Press
ISBN: 1000435636
Category : Mathematics
Languages : en
Pages : 500
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Book Description
Doing Meta-Analysis with R: A Hands-On Guide serves as an accessible introduction on how meta-analyses can be conducted in R. Essential steps for meta-analysis are covered, including calculation and pooling of outcome measures, forest plots, heterogeneity diagnostics, subgroup analyses, meta-regression, methods to control for publication bias, risk of bias assessments and plotting tools. Advanced but highly relevant topics such as network meta-analysis, multi-three-level meta-analyses, Bayesian meta-analysis approaches and SEM meta-analysis are also covered. A companion R package, dmetar, is introduced at the beginning of the guide. It contains data sets and several helper functions for the meta and metafor package used in the guide. The programming and statistical background covered in the book are kept at a non-expert level, making the book widely accessible. Features • Contains two introductory chapters on how to set up an R environment and do basic imports/manipulations of meta-analysis data, including exercises • Describes statistical concepts clearly and concisely before applying them in R • Includes step-by-step guidance through the coding required to perform meta-analyses, and a companion R package for the book
Author: Dewey H. Hodges
Publisher: Cambridge University Press
ISBN: 9781107617094
Category : Technology & Engineering
Languages : en
Pages : 0
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Book Description
This text provides an introduction to structural dynamics and aeroelasticity, with an emphasis on conventional aircraft. The primary areas considered are structural dynamics, static aeroelasticity, and dynamic aeroelasticity. The structural dynamics material emphasizes vibration, the modal representation, and dynamic response. Aeroelastic phenomena discussed include divergence, aileron reversal, airload redistribution, unsteady aerodynamics, flutter, and elastic tailoring. More than one hundred illustrations and tables help clarify the text, and more than fifty problems enhance student learning. This text meets the need for an up-to-date treatment of structural dynamics and aeroelasticity for advanced undergraduate or beginning graduate aerospace engineering students. Praise from the First Edition "Wonderfully written and full of vital information by two unequalled experts on the subject, this text meets the need for an up-to-date treatment of structural dynamics and aeroelasticity for advanced undergraduate or beginning graduate aerospace engineering students." - Current Engineering Practice "Hodges and Pierce have written this significant publication to fill an important gap in aeronautical engineering education. Highly recommended." - Choice ". . . a welcome addition to the textbooks available to those with interest in aeroelasticity. . . . As a textbook, it serves as an excellent resource for advanced undergraduate and entry-level graduate courses in aeroelasticity. . . . Furthermore, practicing engineers interested in a background in aeroelasticity will find the text to be a friendly primer." - AIAA Bulletin
