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Author: IWA Task Group on Biofilm Modeling
Publisher: IWA Publishing
ISBN: 1843390876
Category : Science
Languages : en
Pages : 194
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Book Description
Over 90% of bacterial biomass exists in the form of biofilms. The ability of bacteria to attach to surfaces and to form biofilms often is an important competitive advantage for them over bacteria growing in suspension. Some biofilms are "good" in natural and engineered systems; they are responsible for nutrient cycling in nature and are used to purify waters in engineering processes. Other biofilms are "bad" when they cause fouling and infections of humans and plants. Whether we want to promote good biofilms or eliminate bad biofilms, we need to understand how they work and what works to control them. Mathematical Modeling of Biofilms provides guidelines for the selection and use of mathematical models of biofilms. The whole range of existing models - from simple analytical expressions to complex numerical models - is covered. The application of the models for the solution of typical problems is demonstrated, and the performance of the models is tested in comparative studies. With the dramatic evolution of the computational capacity still going on, modeling tools for research and practice will become more and more significant in the next few years. This report provides the foundation to understand the models and to select the most appropriate one for a given use. Mathematical Modeling of Biofilms gives a state-of-the-art overview that is especially valuable for educating students, new biofilm researchers, and design engineers. Through a series of three benchmark problems, the report demonstrates how to use the different models and indicates when simple or highly complex models are most appropriate. This is the first report to give a quantitative comparison of existing biofilm models. The report supports model-based design of biofilm reactors. The report can be used as basis for teaching biofilm-system modeling. The report provides the foundation for researchers seeking to use biofilm modeling or to develop new biofilm models. Scientific and Technical Report No.18
Author: IWA Task Group on Biofilm Modeling
Publisher: IWA Publishing
ISBN: 1843390876
Category : Science
Languages : en
Pages : 194
Get Book Here
Book Description
Over 90% of bacterial biomass exists in the form of biofilms. The ability of bacteria to attach to surfaces and to form biofilms often is an important competitive advantage for them over bacteria growing in suspension. Some biofilms are "good" in natural and engineered systems; they are responsible for nutrient cycling in nature and are used to purify waters in engineering processes. Other biofilms are "bad" when they cause fouling and infections of humans and plants. Whether we want to promote good biofilms or eliminate bad biofilms, we need to understand how they work and what works to control them. Mathematical Modeling of Biofilms provides guidelines for the selection and use of mathematical models of biofilms. The whole range of existing models - from simple analytical expressions to complex numerical models - is covered. The application of the models for the solution of typical problems is demonstrated, and the performance of the models is tested in comparative studies. With the dramatic evolution of the computational capacity still going on, modeling tools for research and practice will become more and more significant in the next few years. This report provides the foundation to understand the models and to select the most appropriate one for a given use. Mathematical Modeling of Biofilms gives a state-of-the-art overview that is especially valuable for educating students, new biofilm researchers, and design engineers. Through a series of three benchmark problems, the report demonstrates how to use the different models and indicates when simple or highly complex models are most appropriate. This is the first report to give a quantitative comparison of existing biofilm models. The report supports model-based design of biofilm reactors. The report can be used as basis for teaching biofilm-system modeling. The report provides the foundation for researchers seeking to use biofilm modeling or to develop new biofilm models. Scientific and Technical Report No.18
Author: Mojtaba Aghajani Delavar
Publisher: Academic Press
ISBN: 0323903746
Category : Science
Languages : en
Pages : 266
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Book Description
Advanced Mathematical Modelling of Biofilms and its Applications covers the concepts and fundamentals of biofilms, including sections on numerical discrete and numerical continuum models and different biofilms methods, e.g., the lattice Boltzmann method (LBM) and cellular automata (CA) and integrated LBM and individual-based model (iBM). Other sections focus on design, problem-solving and state-of-the-art modelling methods. Addressing the needs to upgrade and update information and knowledge for students, researchers and engineers on biofilms in health care, medicine, food, aquaculture and industry, this book also covers areas of uncertainty and future needs for advancing the use of biofilm models. Over the past 25-30 years, there have been rapid advances in various areas of computer technologies, applications and methods (e.g. complex programming and algorithms, lattice Boltzmann method, high resolution visualization and high-performance computation). These new and emerging technologies are providing unprecedented opportunities to develop modeling frameworks of biofilms and their applications. - Introduces state-of-the-art methods of biofilm modeling, such as integrated lattice Boltzmann method (LBM) and cellular automata (CA) and integrated LBM and individual-based model (iBM) - Provides recent progress in more powerful tools for a deeper understanding of biofilm complexity by implementing state-of-the art biofilm modeling programs - Compares advantages and disadvantages of different biofilm models and analyzes some specific problems for model selection - Evaluates novel process designs without the cost, time and risk of building a physical prototype of the process to identify the most promising designs for experimental testing
Author: Hilary M. Lappin-Scott
Publisher: Cambridge University Press
ISBN: 9780521542128
Category : Medical
Languages : en
Pages : 332
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Book Description
Biochemistry and ecology of biofilms from industrial, medical and other viewpoints.
Author: Zbigniew Lewandowski
Publisher: CRC Press
ISBN: 1466559594
Category : Medical
Languages : en
Pages : 666
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Book Description
The six years that have passed since the publication of the first edition have brought significant advances in both biofilm research and biofilm engineering, which have matured to the extent that biofilm-based technologies are now being designed and implemented. As a result, many chapters have been updated and expanded with the addition of sections reflecting changes in the status quo in biofilm research and engineering. Emphasizing process analysis, engineering systems, biofilm applications, and mathematical modeling, Fundamentals of Biofilm Research, Second Edition provides the tools to unify and advance biofilm research as a whole. Retaining the goals of the first edition, this second edition serves as: A compendium of knowledge about biofilms and biofilm processes A set of instructions for designing and conducting biofilm experiments A set of instructions for making and using various tools useful in biofilm research A set of computational procedures useful in interpreting results of biofilm research A set of instructions for using the model of stratified biofilms for data interpretation, analysis, and biofilm activity prediction
Author: Pallaval Veera Bramhachari
Publisher: Springer
ISBN: 9811324298
Category : Medical
Languages : en
Pages : 377
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Book Description
This book illustrates the importance and significance of Quorum sensing (QS), it’s critical roles in regulating diverse cellular functions in microbes, including bioluminescence, virulence, pathogenesis, gene expression, biofilm formation and antibiotic resistance. Microbes can coordinate population behavior with small molecules called autoinducers (AHL) which serves as a signal of cellular population density, triggering new patterns of gene expression for mounting virulence and pathogenesis. Therefore, these microbes have the competence to coordinate and regulate explicit sets of genes by sensing and communicating amongst themselves utilizing variety of signals. This book descry emphasizes on how bacteria can coordinate an activity and synchronize their response to external signals and regulate gene expression. The chapters of the book provide the recent advancements on various functional aspects of QS systems in different gram positive and gram negative organisms. Finally, the book also elucidates a comprehensive yet a representative description of a large number of challenges associated with quorum sensing signal molecules viz. virulence, pathogenesis, antibiotic synthesis, biosurfactants production, persister cells, cell signaling and biofilms, intra and inter-species communications, host-pathogen interactions, social interactions & swarming migration in biofilms.
Author: Stefan Wuertz
Publisher: IWA Publishing
ISBN: 1843390078
Category : Science
Languages : en
Pages : 425
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Book Description
The central theme of the book is the flow of information from experimental approaches in biofilm research to simulation and modeling of complex wastewater systems. Probably the greatest challenge in wastewater research lies in using the methods and the results obtained in one scientific discipline to design intelligent experiments in other disciplines, and eventually to improve the knowledge base the practitioner needs to run wastewater treatment plants. The purpose of Biofilms in Wastewater Treatment is to provide engineers with the knowledge needed to apply the new insights gained by researchers. The authors provide an authoritative insight into the function of biofilms on a technical and on a lab-scale, cover some of the exciting new basic microbiological and wastewater engineering research involving molecular biology techniques and microscopy, and discuss recent attempts to predict the development of biofilms. This book is divided into 3 sections: Modeling and Simulation; Architecture, Population Structure and Function; and From Fundamentals to Practical Application, which all start with a scientific question. Individual chapters attempt to answer the question and present different angles of looking at problems. In addition there is an extensive glossary to familiarize the non-expert with unfamiliar terminology used by microbiologists and computational scientists. The colour plate section of this book can be downloaded by clicking here. (PDF Format 1 MB)
Author: Sarangam Majumdar
Publisher: Springer Nature
ISBN: 9811574170
Category : Science
Languages : en
Pages : 182
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Book Description
This book introduces the concept of bacterial communication systems from a mathematical modeling point of view. It sheds light on the research undertaken in the last three decades, and the mathematical models that have been proposed to understand the underlying mechanism of such systems. These communication systems are related to quorum sensing mechanisms and quorum sensing regulated processes such as biofilm formation, gene expression, bioluminescence, swarming and virulence. The book further describes the phenomenon of noise, and discusses how noise plays a crucial role in gene expression and the quorum sensing circuit operationusing a set of tools like frequency domain analysis, power spectral density, stochastic simulation and the whitening effect. It also explores various aspects of synthetic biology (related to bacterial communication), such as genetic toggle switch, bistable gene regulatory networks, transcriptional repressor systems, pattern formation, synthetic cooperation, predator-prey synthetic systems, dynamical quorum sensing, synchronized quorum of genetic clocks, role of noise in synthetic biology, the Turing test and stochastic Turing test.
Author: Manuel Simoes
Publisher: Academic Press
ISBN: 0128194987
Category : Science
Languages : en
Pages : 418
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Book Description
Recent Trends in Biofilm Science and Technology helps researchers working on fundamental aspects of biofilm formation and control conduct biofilm studies and interpret results. The book provides a remarkable amount of knowledge on the processes that regulate biofilm formation, the methods used, monitoring characterization and mathematical modeling, the problems/advantages caused by their presence in the food industry, environment and medical fields, and the current and emergent strategies for their control. Research on biofilms has progressed rapidly in the last decade due to the fact that biofilms have required the development of new analytical tools and new collaborations between biologists, engineers and mathematicians. - Presents an overview of the process of biofilm formation and its implications - Provides a clearer understanding of the role of biofilms in infections - Creates a foundation for further research on novel control strategies - Updates readers on the remarkable amount of knowledge on the processes that regulate biofilm formation
Author: Haluk Beyenal
Publisher: John Wiley & Sons
ISBN: 111909738X
Category : Technology & Engineering
Languages : en
Pages : 429
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Book Description
This book serves as a manual of research techniques for electrochemically active biofilm research. Using examples from real biofilm research to illustrate the techniques used for electrochemically active biofilms, this book is of most use to researchers and educators studying microbial fuel cell and bioelectrochemical systems. The book emphasizes the theoretical principles of bioelectrochemistry, experimental procedures and tools useful in quantifying electron transfer processes in biofilms, and mathematical modeling of electron transfer in biofilms. It is divided into three sections: Biofilms: Microbiology and microbioelectrochemistry - Focuses on the microbiologic aspect of electrochemically active biofilms and details the key points of biofilm preparation and electrochemical measurement Electrochemical techniques to study electron transfer processes - Focuses on electrochemical characterization and data interpretation, highlighting key factors in the experimental procedures that affect reproducibility Applications - Focuses on applications of electrochemically active biofilms and development of custom tools to study electrochemically active biofilms. Chapters detail how to build the reactors for applications and measure parameters
Author: Navanietha Krishnaraj Rathinam
Publisher:
ISBN: 9780841234734
Category : Biofilms
Languages : en
Pages : 320
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Book Description
"There is a growing demand for investigation of biofilm mechanisms in detail for the purpose of controlling diseases as well as for harnessing their potential for industrial biotechnology applications. Although biofilms have greater roles in disease biology and offer better yields than suspended cells in bioprocesses, little emphasis has placed on biofilms in several universities' curricula. This book aims to provide a basic understanding about biofilm formation, factors influencing biofilm formations, and engineering strategies for improving or inhibiting the growth of biofilms. This book will serve as course material for the undergraduate students, graduate students, and faculty who are interested in offering a course on biofilm engineering. This book covers techniques that are relevant to biofilm characterization, which will be helpful for the researchers to gain basic understanding about the subject"--
