Author: Harshawardhan Bal
Publisher: Springer Science & Business Media
ISBN: 0387372377
Category : Science
Languages : en
Pages : 353
Book Description
Medical science and practice have undergone fundamental changes in the last 5 years, as large-scale genome projects have resulted in the sequencing of a number of important microbial, plant and animal genomes. This book aims to combine industry standard software engineering and design principles with genomics, bioinformatics and cancer research. Rather than an exercise in learning a programming platform, the text focuses on useful analytical tools for the scientific community.
Java for Bioinformatics and Biomedical Applications
Author: Harshawardhan Bal
Publisher: Springer Science & Business Media
ISBN: 0387372377
Category : Science
Languages : en
Pages : 353
Book Description
Medical science and practice have undergone fundamental changes in the last 5 years, as large-scale genome projects have resulted in the sequencing of a number of important microbial, plant and animal genomes. This book aims to combine industry standard software engineering and design principles with genomics, bioinformatics and cancer research. Rather than an exercise in learning a programming platform, the text focuses on useful analytical tools for the scientific community.
Publisher: Springer Science & Business Media
ISBN: 0387372377
Category : Science
Languages : en
Pages : 353
Book Description
Medical science and practice have undergone fundamental changes in the last 5 years, as large-scale genome projects have resulted in the sequencing of a number of important microbial, plant and animal genomes. This book aims to combine industry standard software engineering and design principles with genomics, bioinformatics and cancer research. Rather than an exercise in learning a programming platform, the text focuses on useful analytical tools for the scientific community.
Biomedical Signal Processing
Author: Douglas Lyon Phd Pe
Publisher:
ISBN:
Category :
Languages : en
Pages : 232
Book Description
Signal processing with applications in the area of biomedical engineering. We have several experiments using Arduino and show examples in Java and C/C++.
Publisher:
ISBN:
Category :
Languages : en
Pages : 232
Book Description
Signal processing with applications in the area of biomedical engineering. We have several experiments using Arduino and show examples in Java and C/C++.
Bioinformatics Software Engineering
Author: Paul Weston
Publisher: John Wiley & Sons
ISBN: 9780470857724
Category : Medical
Languages : en
Pages : 146
Book Description
Bioinformatics Software Engineering: Delivering Effective Applications will be useful to anyone who wants to understand how successful software can be developed in a rapidly changing environment. A handbook, not a textbook, it is not tied to any particular operating system, platform, language, or methodology. Instead it focuses on principles and practices that have been proven in the real world. It is pragmatic, emphasizing the importance of what the author calls Adaptive Programming - doing what works in your situation, and it is concise, covering the whole software development lifecycle in one slim volume. At each stage, it describes common pitfalls, explains how these can be avoided, and suggests simple techniques which make it easier to deliver better solutions. "Well thought-out ... addresses many of the key issues facing developers of bioinformatics software." (Simon Dear, Director, UK Technology and Development, Bioinformatics Engineering and Integration, Genetics Research, GlaxoSmithKline) Here are some examples from the book itself. On software development: “Writing software properly involves talking to people – often lots of people – and plenty of non-coding work on your part. It requires the ability to dream up new solutions to problems so complicated that they are hard to describe.” From description to specification: “Look for verbs – action words, such as ‘does’, ‘is’ and ‘views’. Identify nouns – naming words, like ‘user’, ‘home’ and ‘sequence’. List the adjectives – describing words, for example ‘quick’, ‘simple’ or ‘precise’. The verbs are the functions that must be provided by your application. The nouns define the parameters to those functions, and the adjectives specify the constraint conditions under which your program must operate.” On how to start writing software: “Handle errors. Take in data. Show output. Get going!” On testing: “It may not be physically possible to test every potential combination of situations that could occur as users interact with a program. But one thing that can be done is to test an application at the agreed extremes of its capability: the maximum number of simultaneous users it has to support, the minimum system configuration it must run on, the lowest communication speed it must cope with, and the most complex operations it must perform. If your program can cope with conditions at the edge of its performance envelope, it is less likely to encounter difficulties in dealing with less challenging situations.” On showing early versions of software to users: “It can be hard explaining the software development process to people who are unfamiliar with it. Code that to you is nearly finished is simply not working to them, and seeing their dream in bits on the workbench can be disappointing to customers, especially when they were expecting to be able to take it for a test drive.” On bugs: “If your users find a genuinely reproducible bug in production code, apologize, fix it fast, and then fix the system that allowed it through. And tell your customers what you are doing, and why, so they will be confident that it will not happen again. Everybody makes mistakes. Don’t make the same ones twice.” And one last thought on successful software development: "You have to be a detective, following up clues and examining evidence to discover what has gone wrong and why. And you have to be a politician, understanding what people want, both in public and in private, and how this is likely to affect what you are trying to do. This book cannot teach you how to do all of that, but it can help."
Publisher: John Wiley & Sons
ISBN: 9780470857724
Category : Medical
Languages : en
Pages : 146
Book Description
Bioinformatics Software Engineering: Delivering Effective Applications will be useful to anyone who wants to understand how successful software can be developed in a rapidly changing environment. A handbook, not a textbook, it is not tied to any particular operating system, platform, language, or methodology. Instead it focuses on principles and practices that have been proven in the real world. It is pragmatic, emphasizing the importance of what the author calls Adaptive Programming - doing what works in your situation, and it is concise, covering the whole software development lifecycle in one slim volume. At each stage, it describes common pitfalls, explains how these can be avoided, and suggests simple techniques which make it easier to deliver better solutions. "Well thought-out ... addresses many of the key issues facing developers of bioinformatics software." (Simon Dear, Director, UK Technology and Development, Bioinformatics Engineering and Integration, Genetics Research, GlaxoSmithKline) Here are some examples from the book itself. On software development: “Writing software properly involves talking to people – often lots of people – and plenty of non-coding work on your part. It requires the ability to dream up new solutions to problems so complicated that they are hard to describe.” From description to specification: “Look for verbs – action words, such as ‘does’, ‘is’ and ‘views’. Identify nouns – naming words, like ‘user’, ‘home’ and ‘sequence’. List the adjectives – describing words, for example ‘quick’, ‘simple’ or ‘precise’. The verbs are the functions that must be provided by your application. The nouns define the parameters to those functions, and the adjectives specify the constraint conditions under which your program must operate.” On how to start writing software: “Handle errors. Take in data. Show output. Get going!” On testing: “It may not be physically possible to test every potential combination of situations that could occur as users interact with a program. But one thing that can be done is to test an application at the agreed extremes of its capability: the maximum number of simultaneous users it has to support, the minimum system configuration it must run on, the lowest communication speed it must cope with, and the most complex operations it must perform. If your program can cope with conditions at the edge of its performance envelope, it is less likely to encounter difficulties in dealing with less challenging situations.” On showing early versions of software to users: “It can be hard explaining the software development process to people who are unfamiliar with it. Code that to you is nearly finished is simply not working to them, and seeing their dream in bits on the workbench can be disappointing to customers, especially when they were expecting to be able to take it for a test drive.” On bugs: “If your users find a genuinely reproducible bug in production code, apologize, fix it fast, and then fix the system that allowed it through. And tell your customers what you are doing, and why, so they will be confident that it will not happen again. Everybody makes mistakes. Don’t make the same ones twice.” And one last thought on successful software development: "You have to be a detective, following up clues and examining evidence to discover what has gone wrong and why. And you have to be a politician, understanding what people want, both in public and in private, and how this is likely to affect what you are trying to do. This book cannot teach you how to do all of that, but it can help."
Environmental Health Perspectives
Author:
Publisher:
ISBN:
Category : Environmental health
Languages : en
Pages : 908
Book Description
Publisher:
ISBN:
Category : Environmental health
Languages : en
Pages : 908
Book Description
Biomedical Engineering: Concepts, Methodologies, Tools, and Applications
Author: Management Association, Information Resources
Publisher: IGI Global
ISBN: 1522531599
Category : Technology & Engineering
Languages : en
Pages : 1491
Book Description
Technological tools and computational techniques have enhanced the healthcare industry. These advancements have led to significant progress and novel opportunities for biomedical engineering. Biomedical Engineering: Concepts, Methodologies, Tools, and Applications is an authoritative reference source for emerging scholarly research on trends, techniques, and future directions in the field of biomedical engineering technologies. Highlighting a comprehensive range of topics such as nanotechnology, biomaterials, and robotics, this multi-volume book is ideally designed for medical practitioners, professionals, students, engineers, and researchers interested in the latest developments in biomedical technology.
Publisher: IGI Global
ISBN: 1522531599
Category : Technology & Engineering
Languages : en
Pages : 1491
Book Description
Technological tools and computational techniques have enhanced the healthcare industry. These advancements have led to significant progress and novel opportunities for biomedical engineering. Biomedical Engineering: Concepts, Methodologies, Tools, and Applications is an authoritative reference source for emerging scholarly research on trends, techniques, and future directions in the field of biomedical engineering technologies. Highlighting a comprehensive range of topics such as nanotechnology, biomaterials, and robotics, this multi-volume book is ideally designed for medical practitioners, professionals, students, engineers, and researchers interested in the latest developments in biomedical technology.
Large-Scale Distributed Computing and Applications: Models and Trends
Author: Cristea, Valentin
Publisher: IGI Global
ISBN: 161520704X
Category : Computers
Languages : en
Pages : 275
Book Description
Many applications follow the distributed computing paradigm, in which parts of the application are executed on different network-interconnected computers. The extension of these applications in terms of number of users or size has led to an unprecedented increase in the scale of the infrastructure that supports them. Large-Scale Distributed Computing and Applications: Models and Trends offers a coherent and realistic image of today's research results in large scale distributed systems, explains state-of-the-art technological solutions for the main issues regarding large scale distributed systems, and presents the benefits of using large scale distributed systems and the development process of scientific and commercial distributed applications.
Publisher: IGI Global
ISBN: 161520704X
Category : Computers
Languages : en
Pages : 275
Book Description
Many applications follow the distributed computing paradigm, in which parts of the application are executed on different network-interconnected computers. The extension of these applications in terms of number of users or size has led to an unprecedented increase in the scale of the infrastructure that supports them. Large-Scale Distributed Computing and Applications: Models and Trends offers a coherent and realistic image of today's research results in large scale distributed systems, explains state-of-the-art technological solutions for the main issues regarding large scale distributed systems, and presents the benefits of using large scale distributed systems and the development process of scientific and commercial distributed applications.
Bioinformatics
Author: Shui Qing Ye
Publisher: CRC Press
ISBN: 1584888113
Category : Computers
Languages : en
Pages : 646
Book Description
An emerging, ever-evolving branch of science, bioinformatics has paved the way for the explosive growth in the distribution of biological information to a variety of biological databases, including the National Center for Biotechnology Information. For growth to continue in this field, biologists must obtain basic computer skills while computer spe
Publisher: CRC Press
ISBN: 1584888113
Category : Computers
Languages : en
Pages : 646
Book Description
An emerging, ever-evolving branch of science, bioinformatics has paved the way for the explosive growth in the distribution of biological information to a variety of biological databases, including the National Center for Biotechnology Information. For growth to continue in this field, biologists must obtain basic computer skills while computer spe
XML for Bioinformatics
Author: Ethan Cerami
Publisher: Springer Science & Business Media
ISBN: 0387274782
Category : Computers
Languages : en
Pages : 311
Book Description
Introduction The goal of this book is to introduce XML to a bioinformatics audience. It does so by introducing the fundamentals of XML, Document Type De?nitions (DTDs), XML Namespaces, XML Schema, and XML parsing, and illustrating these concepts with speci?c bioinformatics case studies. The book does not assume any previous knowledge of XML and is geared toward those who want a solid introduction to fundamental XML concepts. The book is divided into nine chapters: Chapter 1: Introduction to XML for Bioinformatics. This chapter provides an introduction to XML and describes the use of XML in biological data exchange. A bird’s-eye view of our ?rst case study, the Distributed Annotation System (DAS), is provided and we examine a sample DAS XML document. The chapter concludes with a discussion of the pros and cons of using XML in bioinformatic applications. Chapter 2: Fundamentals of XML and BSML. This chapter introduces the fundamental concepts of XML and the Bioinformatic Sequence Markup Language (BSML). We explore the origins of XML, de?ne basic rules for XML document structure, and introduce XML Na- spaces. We also explore several sample BSML documents and visualize these documents in the TM Rescentris Genomic Workspace Viewer.
Publisher: Springer Science & Business Media
ISBN: 0387274782
Category : Computers
Languages : en
Pages : 311
Book Description
Introduction The goal of this book is to introduce XML to a bioinformatics audience. It does so by introducing the fundamentals of XML, Document Type De?nitions (DTDs), XML Namespaces, XML Schema, and XML parsing, and illustrating these concepts with speci?c bioinformatics case studies. The book does not assume any previous knowledge of XML and is geared toward those who want a solid introduction to fundamental XML concepts. The book is divided into nine chapters: Chapter 1: Introduction to XML for Bioinformatics. This chapter provides an introduction to XML and describes the use of XML in biological data exchange. A bird’s-eye view of our ?rst case study, the Distributed Annotation System (DAS), is provided and we examine a sample DAS XML document. The chapter concludes with a discussion of the pros and cons of using XML in bioinformatic applications. Chapter 2: Fundamentals of XML and BSML. This chapter introduces the fundamental concepts of XML and the Bioinformatic Sequence Markup Language (BSML). We explore the origins of XML, de?ne basic rules for XML document structure, and introduce XML Na- spaces. We also explore several sample BSML documents and visualize these documents in the TM Rescentris Genomic Workspace Viewer.
Advanced Techniques in Musculoskeletal Medicine & Physiotherapy - E-Book
Author: Fermín Valera Garrido
Publisher: Elsevier Health Sciences
ISBN: 070206498X
Category : Medical
Languages : en
Pages : 543
Book Description
Advanced Techniques in Musculoskeletal Medicine & Physiotherapy is a brand new, highly illustrated guide to the diagnosis and treatment of musculoskeletal disorders. It demonstrates how to safely and effectively use selected minimally invasive therapies in practice. In addition to more well-established techniques such as acupuncture or dry needling, this ground-breaking resource also covers techniques including intratissue percutaneous electrolysis, mesotherapy, percutaneous needle tenotomy, and high volume image guided injections. Other featured chapters include those on specific musculoskeletal ultrasound such as sonoanatomy and ultrasound-guided procedures. Each chapter describes the principles, indications and contraindications, mechanisms of action and detailed outlines of techniques with an emphasis throughout on accessible practical information. Additionally, methodologies, research results and summaries of studies for particular minimally invasive therapies are presented. The book is also supported by a companion website – www.advancedtechniquesonline.com – containing procedural video clips, a full colour image library and interactive multiple choice questions (MCQs). - skills-based and clinically-oriented – reinforced by the latest contemporary scientific medical research - chapters on outcomes in clinical practice - indications and contraindications discussed - clinical cases, key terms and key points boxes used throughout - companion website – www.advancedtechniquesonline.com – containing procedural video clips, full colour image bank and interactive MCQs
Publisher: Elsevier Health Sciences
ISBN: 070206498X
Category : Medical
Languages : en
Pages : 543
Book Description
Advanced Techniques in Musculoskeletal Medicine & Physiotherapy is a brand new, highly illustrated guide to the diagnosis and treatment of musculoskeletal disorders. It demonstrates how to safely and effectively use selected minimally invasive therapies in practice. In addition to more well-established techniques such as acupuncture or dry needling, this ground-breaking resource also covers techniques including intratissue percutaneous electrolysis, mesotherapy, percutaneous needle tenotomy, and high volume image guided injections. Other featured chapters include those on specific musculoskeletal ultrasound such as sonoanatomy and ultrasound-guided procedures. Each chapter describes the principles, indications and contraindications, mechanisms of action and detailed outlines of techniques with an emphasis throughout on accessible practical information. Additionally, methodologies, research results and summaries of studies for particular minimally invasive therapies are presented. The book is also supported by a companion website – www.advancedtechniquesonline.com – containing procedural video clips, a full colour image library and interactive multiple choice questions (MCQs). - skills-based and clinically-oriented – reinforced by the latest contemporary scientific medical research - chapters on outcomes in clinical practice - indications and contraindications discussed - clinical cases, key terms and key points boxes used throughout - companion website – www.advancedtechniquesonline.com – containing procedural video clips, full colour image bank and interactive MCQs
Computational Biology
Author: B Thiagarajan
Publisher: MJP Publisher
ISBN:
Category : Science
Languages : en
Pages : 519
Book Description
PART I FUNDAMENTALS OF COMPUTING IN BIOSCIENCES Role of Computers in Biosciences Essentials of C Programming Basic Programming Techniques Arrays in C Structures and Unions Pointers Functions Files and Command Line Arguments Role of Programming Languages in Bioinformatics Role of C++ and PERL in Bioinformatics PART II ‘OMICS IN BIOLOGY Introduction to Molecular Biology Cell Introduction to Bioinformatics Genomics Transcriptomics Metabolomics Glossary References Index
Publisher: MJP Publisher
ISBN:
Category : Science
Languages : en
Pages : 519
Book Description
PART I FUNDAMENTALS OF COMPUTING IN BIOSCIENCES Role of Computers in Biosciences Essentials of C Programming Basic Programming Techniques Arrays in C Structures and Unions Pointers Functions Files and Command Line Arguments Role of Programming Languages in Bioinformatics Role of C++ and PERL in Bioinformatics PART II ‘OMICS IN BIOLOGY Introduction to Molecular Biology Cell Introduction to Bioinformatics Genomics Transcriptomics Metabolomics Glossary References Index