Inorganic Polyphosphate in the Cell and Developmental Biology of Caulobacter Crescentus

Inorganic Polyphosphate in the Cell and Developmental Biology of Caulobacter Crescentus PDF Author: Jonathan Thompson Henry
Publisher:
ISBN: 9781303422928
Category :
Languages : en
Pages : 163

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Book Description
The gram-negative aquatic bacterium Caulobacter crescentus displays two distinct cell types: the swarmer cell and the stalked cell. Swarmer cells spend a variable amount of time in the swarmer phase before differentiating into stalked cells, and this interval depends critically on the cell's nutrient environment. Low carbon or nitrogen promote long swarmer phases, while low phosphorus promotes a short swarmer phase. Electron microscopy of Caulobacter isolates reveals prominent polyphosphate (polyP) inclusions, present as one or two granules within cells. The so-called "phosphorus clock" hypothesis of C. crescentus development unites these observations by asserting that this inherited polyP, in the form of polyP granules, dictates how long a swarmer will remain in the swarmer state: if carbon or nitrogen is exhausted, polyP is accumulated in predivisional cells, and the resultant newborn swarmers can spend a long time in that state before drawing down their polyP reserves. In contrast, if phosphorus is exhausted, polyP accumulation halts, and newborn swarmers do not receive a store of polyP and quickly differentiate into stalked cells. This hypothesis had remained untested until the present. Moreover, no molecular mechanism had previously been attributed to the timing of swarmer differentiation, and though polyP granules have been known to occupy characteristic positions within bacteria since 1895, no studies concerning the molecular determinants of granule localization had been conducted in any species. This dissertation sheds light on both phenomena. Chapter 2 describes our discovery that polyP, as well as the stringent response effector ppGpp, are important for the timing of swarmer cell differentiation. Our findings represent the first molecular clues to how these cells modulate their cell cycle to respond to changing nutrient conditions. Furthermore, we partially confirm the "phosphorus clock" hypothesis, demonstrating that without polyP, swarmers do not accumulate in carbon starvation. Subsequently, Chapter 3 details our analysis of polyP as a subcellular entity. Struck by the consistent localization of polyP granules within nascent C. crescentus mother and daughter cells, we explore the molecular mechanism underpinning this organization, determining that it is intimately related to the cell's chromosomal state. Finally in Chapter 4, we present unpublished phenotypic and transcriptional analysis of a ppk1 null strain in an attempt to understand the link between polyP and C. crescentus metabolism, which remains mysterious, as it has in other species. As an Appendix, we present a significant literature review of a class of ligand-binding protein domains; though thematically unrelated, this review contains significant primary research and represents a contribution to the field of microbiology generally.

Inorganic Polyphosphate in the Cell and Developmental Biology of Caulobacter Crescentus

Inorganic Polyphosphate in the Cell and Developmental Biology of Caulobacter Crescentus PDF Author: Jonathan Thompson Henry
Publisher:
ISBN: 9781303422928
Category :
Languages : en
Pages : 163

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Book Description
The gram-negative aquatic bacterium Caulobacter crescentus displays two distinct cell types: the swarmer cell and the stalked cell. Swarmer cells spend a variable amount of time in the swarmer phase before differentiating into stalked cells, and this interval depends critically on the cell's nutrient environment. Low carbon or nitrogen promote long swarmer phases, while low phosphorus promotes a short swarmer phase. Electron microscopy of Caulobacter isolates reveals prominent polyphosphate (polyP) inclusions, present as one or two granules within cells. The so-called "phosphorus clock" hypothesis of C. crescentus development unites these observations by asserting that this inherited polyP, in the form of polyP granules, dictates how long a swarmer will remain in the swarmer state: if carbon or nitrogen is exhausted, polyP is accumulated in predivisional cells, and the resultant newborn swarmers can spend a long time in that state before drawing down their polyP reserves. In contrast, if phosphorus is exhausted, polyP accumulation halts, and newborn swarmers do not receive a store of polyP and quickly differentiate into stalked cells. This hypothesis had remained untested until the present. Moreover, no molecular mechanism had previously been attributed to the timing of swarmer differentiation, and though polyP granules have been known to occupy characteristic positions within bacteria since 1895, no studies concerning the molecular determinants of granule localization had been conducted in any species. This dissertation sheds light on both phenomena. Chapter 2 describes our discovery that polyP, as well as the stringent response effector ppGpp, are important for the timing of swarmer cell differentiation. Our findings represent the first molecular clues to how these cells modulate their cell cycle to respond to changing nutrient conditions. Furthermore, we partially confirm the "phosphorus clock" hypothesis, demonstrating that without polyP, swarmers do not accumulate in carbon starvation. Subsequently, Chapter 3 details our analysis of polyP as a subcellular entity. Struck by the consistent localization of polyP granules within nascent C. crescentus mother and daughter cells, we explore the molecular mechanism underpinning this organization, determining that it is intimately related to the cell's chromosomal state. Finally in Chapter 4, we present unpublished phenotypic and transcriptional analysis of a ppk1 null strain in an attempt to understand the link between polyP and C. crescentus metabolism, which remains mysterious, as it has in other species. As an Appendix, we present a significant literature review of a class of ligand-binding protein domains; though thematically unrelated, this review contains significant primary research and represents a contribution to the field of microbiology generally.

Inorganic Polyphosphates in Eukaryotic Cells

Inorganic Polyphosphates in Eukaryotic Cells PDF Author: Tatiana Kulakovskaya
Publisher: Springer
ISBN: 3319410733
Category : Science
Languages : en
Pages : 242

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Book Description
The book elucidates the role of inorganic polyphosphates in eukaryotic cells, from fungi and protozoa to human being. To date, there is plenty of evidence that these anionic biopolymers occurring in the cells of all living organisms, from bacteria to humans, perform numerous regulatory functions. The book describes the evolution of PolyPs, their role in lower eukaryotes and their involvement in various processes in the human organism, as well as its use in biomaterials such as bioactive glass and engineered bone tissue. The aim of this book is to summarize the data of the past decade on the functional role of inorganic polyphosphates in eukaryotes and discuss their biological role also in context of common human diseases. The book will provide a modern concept of the functional significance of these biopolymers, useful for researchers in cell biology, biochemistry, molecular biology and biomedicine alike.

Inorganic Polyphosphates

Inorganic Polyphosphates PDF Author: Heinz C. Schröder
Publisher: Springer Science & Business Media
ISBN: 3642584446
Category : Science
Languages : en
Pages : 325

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Book Description
Inorganic polyphosphates - polymers of orthophosphate linked by high-energy phosphoanhydride bonds - have been found in apparently all forms of life, from bacteria, yeasts and fungi to higher plants and animals. These polymers, which had been neglected for a long time, have become a fascinating area of research in the last few years. This volume summarizes the present state of knowledge about the metabolism and function of inorganic polyphosphates. In addition, the methods to study these polymers as well as the biotechnological applications of inorganic polyphosphates are described. The 15 chapters of this volume, dealing with different aspects of polyphosphate research, are written by experts in the field. This book represents a valuable source of information not only for researchers working on this subject, but also for scientists interested in fundamental aspects of cell and energy metabolism.

Inorganic Polyphosphates

Inorganic Polyphosphates PDF Author: Werner E. G. Müller
Publisher: Springer Nature
ISBN: 3031012372
Category : Science
Languages : en
Pages : 196

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Book Description
This volume focuses on the biomedical aspects of inorganic polyphosphates, a family of unique bio-inorganic polymers. In recent years, great advances have been made in understanding the development, metabolism, and physiological role of inorganic polyphosphates. These energy-rich polymers, which consist of long chains of phosphate units, are evolutionary old molecules. The acidocalcisomes, conserved organelles from bacteria to humans, as well as the mitochondria play a central role in polyphosphate production and storage. Polyphosphates have been assigned multiple functions, some of which are closely related to medically important processes, such as blood coagulation and fibrinolysis, energy metabolism, cell cycle regulation, apoptosis, chaperon function, microvascularization, stress response, neurodegeneration and aging. The development of bioinspired polyphosphate particles, in combination with suitable hydrogel-forming polymers enabled the development of new strategies in regenerative medicine, in particular for hard and soft tissue repair, but also in drug delivery and antimicrobial defense. This book not only highlights the basic research in this area, but also discusses possible applications. Therefore, it appeals to scientists working in cell biology, biochemistry, and biomedicine and practicioners alike.

Asymmetric Cell Division in Development, Differentiation and Cancer

Asymmetric Cell Division in Development, Differentiation and Cancer PDF Author: Jean-Pierre Tassan
Publisher: Springer
ISBN: 3319531506
Category : Science
Languages : en
Pages : 421

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Book Description
This book provides readers with an overview of the frequent occurrence of asymmetric cell division. Employing a broad range of examples, it highlights how this mode of cell division constitutes the basis of multicellular organism development and how its misregulation can lead to cancer. To underline such developmental correlations, readers will for example gain insights into stem cell fate and tumor growth. In turn, subsequent chapters include descriptions of asymmetric cell division from unicellular organisms to humans in both physiological and pathological conditions. The book also illustrates the importance of this process for evolution and our need to understand the background mechanisms, offering a valuable guide not only for students in the field of developmental biology but also for experienced researchers from neighboring fields.

Research Awards Index

Research Awards Index PDF Author:
Publisher:
ISBN:
Category : Medicine
Languages : en
Pages : 874

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Book Description


Droplets of Life

Droplets of Life PDF Author: Vladimir N Uversky
Publisher: Academic Press
ISBN: 0128241756
Category : Science
Languages : en
Pages : 730

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Book Description
Droplets of Life: Membrane-Less Organelles, Biomolecular Condensates, and Biological Liquid–Liquid Phase Separation provides foundational information on the biophysics, biogenesis, structure, functions, and roles of membrane-less organelles. The study of liquid–liquid phase separation has attracted a lot of attention from disciplines such as cell biology, biophysics, biochemistry, and others trying to understand how, why, and what roles these condensates play in homeostasis and disease states in living organisms. This book's editor recruited a group of international experts to provide a current and authoritative overview of all aspects associated with this exciting area. Sections introduce membrane-less organelles (MLOs) and biomolecular condensates; MLOs in different sizes, shapes, and composition; and the formation of MLOs due to phase separation and how it can tune reactions, organize the intracellular environment, and provide a role in cellular fitness. . - Presents the first book to establish the foundations of this exciting research area - Combines biophysics, structural and cell biology, and biochemistry perspectives into a single volume - Edited and authored by world-leading scientists - Covers basic physical and biological principles and health and disease implications

Bacteriological Proceedings

Bacteriological Proceedings PDF Author: American Society for Microbiology
Publisher:
ISBN:
Category : Bacteriology
Languages : en
Pages : 692

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Book Description
Abstracts of the annual meeting.

Physical Biology of the Cell

Physical Biology of the Cell PDF Author: Rob Phillips
Publisher: Garland Science
ISBN: 1134111584
Category : Science
Languages : en
Pages : 1089

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Book Description
Physical Biology of the Cell is a textbook for a first course in physical biology or biophysics for undergraduate or graduate students. It maps the huge and complex landscape of cell and molecular biology from the distinct perspective of physical biology. As a key organizing principle, the proximity of topics is based on the physical concepts that

Comparative Virology

Comparative Virology PDF Author: Karl Maramorosch
Publisher: Academic Press
ISBN: 1483269698
Category : Science
Languages : en
Pages : 601

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Book Description
Comparative Virology provides an integrated comparison of viruses, based on their chemical and morphological characteristics. These descriptions will not only give the reader a background but also a detailed analysis of the various groups. In some instances the groups are still host related, as in the case of bacteriophages and polyhedral insect viruses. In others, for instance in pox viruses, the group comprises viruses of vertebrates and invertebrates. The hosts of the bacilliform Rhabdovirales range from man and other warm-blooded vertebrates through invertebrate animals to plants. A special chapter is devoted to viruses devoid of protein—a group that is of great interest and that has only recently been recognized. Since there is historical and practical interest in écologie groupings, such as arboviruses and oncogenic viruses, chapters on such groups have also been included. The book opens with a discussion on the classification of viruses. Chapters dealing with DNA viruses and RNA viruses follow, and the ecologically and disease-oriented groups complete the volume. It is hoped that ""Comparative Virology"" will help bring unity to the science of virology through the comparative approach that is not dependent on virus-host interactions. The combined efforts of eminent contributors to discuss and evaluate new information will hopefully benefit all who are interested in virology