Developing of a Quantitative Toxicogenomics-based Approach for Water Quality Monitoring and Toxicity Evaluation

Developing of a Quantitative Toxicogenomics-based Approach for Water Quality Monitoring and Toxicity Evaluation PDF Author: Na Gou
Publisher:
ISBN:
Category : Environmental monitoring
Languages : en
Pages : 429

Get Book Here

Book Description
The recognized and unknown risks associated with the ever-increasing number of pollutants in our environment presents a serious threat to us all. This poses a pressing need for a breakthrough in toxicity-assessment technology because the currently available methods are neither feasible nor sufficient to provide the timely information needed for regulatory decision-making and technology development to eliminate these threats. This study developed a novel, feasible and cost-effective quantitative toxicogenomics-based toxicity assessment platform for high-throughput and effective chemical hazardous identification and environmental toxicity monitoring. We systematically optimized the assay platform, evaluated its robustness and performance, validated the assay output and demonstrated its wide applications. Compared with other main stream "omics' technologies, the proposed method greatly improves the feasibility and cost effectiveness as a result of its much simpler, faster, and more reliable assay procedures. Furthermore, it provides multi-dimensional transcriptional level effect information with a temporal dimension and therefore can more accurately reflect the chemical-induced time-dependent cell responses with higher sensitivity and specificity. We demonstrated that information-rich toxicogenomics data are powerful for evaluating toxic effects, understanding toxicity mechanisms, and obtaining pollutant-specific molecular fingerprints for compound /sample classification and identification. One of the main challenges in applying toxicogenomics for environmental monitoring is the lack of a quantitative method to convert the toxicogenomic information into a readily usable and transferable format that can be incorporated into ecological risk assessment and regulatory framework. We proposed a new transcriptional effect level index (TELI) that exhibited a dose-response relationship and allowed for linking the transcriptional level effects to conventional toxicity endpoints. In addition, we pioneered quantitative molecule toxicity modeling within the context of toxicogenomics and paved the road for further mixture toxicity identification and prediction. Cross-species comparison and extrapolation is another key aspect related to predictive and mechanistic toxicity assessment to overcome the limitation of data generation ability. We have compared three different species for variety of compounds and demonstrated the possibility of cross-species extrapolation with stress-response pathway ensemble based toxicity assessment. Finally, we demonstrated successful application of the novel assay for mechanistic CECs toxicity assessment, whole effluent toxicity monitoring and risk-based water treatment technologies efficacy evaluation.

Developing of a Quantitative Toxicogenomics-based Approach for Water Quality Monitoring and Toxicity Evaluation

Developing of a Quantitative Toxicogenomics-based Approach for Water Quality Monitoring and Toxicity Evaluation PDF Author: Na Gou
Publisher:
ISBN:
Category : Environmental monitoring
Languages : en
Pages : 429

Get Book Here

Book Description
The recognized and unknown risks associated with the ever-increasing number of pollutants in our environment presents a serious threat to us all. This poses a pressing need for a breakthrough in toxicity-assessment technology because the currently available methods are neither feasible nor sufficient to provide the timely information needed for regulatory decision-making and technology development to eliminate these threats. This study developed a novel, feasible and cost-effective quantitative toxicogenomics-based toxicity assessment platform for high-throughput and effective chemical hazardous identification and environmental toxicity monitoring. We systematically optimized the assay platform, evaluated its robustness and performance, validated the assay output and demonstrated its wide applications. Compared with other main stream "omics' technologies, the proposed method greatly improves the feasibility and cost effectiveness as a result of its much simpler, faster, and more reliable assay procedures. Furthermore, it provides multi-dimensional transcriptional level effect information with a temporal dimension and therefore can more accurately reflect the chemical-induced time-dependent cell responses with higher sensitivity and specificity. We demonstrated that information-rich toxicogenomics data are powerful for evaluating toxic effects, understanding toxicity mechanisms, and obtaining pollutant-specific molecular fingerprints for compound /sample classification and identification. One of the main challenges in applying toxicogenomics for environmental monitoring is the lack of a quantitative method to convert the toxicogenomic information into a readily usable and transferable format that can be incorporated into ecological risk assessment and regulatory framework. We proposed a new transcriptional effect level index (TELI) that exhibited a dose-response relationship and allowed for linking the transcriptional level effects to conventional toxicity endpoints. In addition, we pioneered quantitative molecule toxicity modeling within the context of toxicogenomics and paved the road for further mixture toxicity identification and prediction. Cross-species comparison and extrapolation is another key aspect related to predictive and mechanistic toxicity assessment to overcome the limitation of data generation ability. We have compared three different species for variety of compounds and demonstrated the possibility of cross-species extrapolation with stress-response pathway ensemble based toxicity assessment. Finally, we demonstrated successful application of the novel assay for mechanistic CECs toxicity assessment, whole effluent toxicity monitoring and risk-based water treatment technologies efficacy evaluation.

Toxicogenomics-Based Cellular Models

Toxicogenomics-Based Cellular Models PDF Author: Jos Kleinjans
Publisher: Academic Press
ISBN: 0123978718
Category : Medical
Languages : en
Pages : 367

Get Book Here

Book Description
Toxicogenomics-Based Cellular Models is a unique and valuable reference for all academic and professional researchers employing toxicogenomic methods with respect to animal testing for chemical safety. This resource offers cutting-edge information on the application of toxicogenomics to developing alternatives to current animal toxicity tests. By illustrating the development of toxicogenomics-based cellular models for critical endpoints of toxicity and providing real-world examples for validation and data analysis, this book provides an assessment of the current state of the field, as well as opportunities and challenges for the future. Written by renowned international toxicological experts, this book explores ‘omics technology for developing new assays for toxicity testing and safety assessment and provides the reader with a focused examination of alternative means to animal testing. Describes the state-of-the-art in developing toxicogenomics-based cellular models for chemical-induced carcinogenicity, immunotoxicity, developmental toxicity, neurotoxicity and reproduction toxicity Illustrates how to validate toxicogenomics-based alternative test models and provides an outlook to societal and economic implementation of these novel assays Includes an overview of current testing methods and risk assessment frameworks Provides a real-world assessment by articulating the current development and challenges in toxicogenomics while suggesting ways to move this field forward

Mixture Toxicity

Mixture Toxicity PDF Author: Cornelis A. M. van Gestel
Publisher: CRC Press
ISBN: 1439830096
Category : Medical
Languages : en
Pages : 312

Get Book Here

Book Description
In the last decade and a half, great progress has been made in the development of concepts and models for mixture toxicity, both in human and environmental toxicology. However, due to their different protection goals, developments have often progressed in parallel but with little integration. Arguably the first book to clearly link ecotoxicology an

Applications of Toxicogenomic Technologies to Predictive Toxicology and Risk Assessment

Applications of Toxicogenomic Technologies to Predictive Toxicology and Risk Assessment PDF Author: National Research Council
Publisher: National Academies Press
ISBN: 0309112982
Category : Science
Languages : en
Pages : 300

Get Book Here

Book Description
The new field of toxicogenomics presents a potentially powerful set of tools to better understand the health effects of exposures to toxicants in the environment. At the request of the National Institute of Environmental Health Sciences, the National Research Council assembled a committee to identify the benefits of toxicogenomics, the challenges to achieving them, and potential approaches to overcoming such challenges. The report concludes that realizing the potential of toxicogenomics to improve public health decisions will require a concerted effort to generate data, make use of existing data, and study data in new waysâ€"an effort requiring funding, interagency coordination, and data management strategies.

Toxicity Testing for Assessment of Environmental Agents

Toxicity Testing for Assessment of Environmental Agents PDF Author: National Research Council
Publisher: National Academies Press
ISBN: 0309164869
Category : Nature
Languages : en
Pages : 270

Get Book Here

Book Description
Toxicity testing in laboratory animals provides much of the information used by the Environmental Protection Agency (EPA) to assess the hazards and risks associated with exposure to environmental agents that might harm public health or the environment. The data are used to establish maximum acceptable concentrations of environmental agents in drinking water, set permissible limits of exposure of workers, define labeling requirements, establish tolerances for pesticides residues on food, and set other kinds of limits on the basis of risk assessment. Because the number of regulations that require toxicity testing is growing, EPA called for a comprehensive review of established and emerging toxicity-testing methods and strategies. This interim report reviews current toxicity-testing methods and strategies and near-term improvements in toxicity-testing approaches proposed by EPA and others. It identifies several recurring themes and questions in the various reports reviewed. The final report will present a long-range vision and strategic plan to advance the practices of toxicity testing and human health assessment of environmental contaminants.

Bioanalytical Tools in Water Quality Assessment

Bioanalytical Tools in Water Quality Assessment PDF Author: Beate Escher
Publisher: IWA Publishing
ISBN: 1843393689
Category : Science
Languages : en
Pages : 273

Get Book Here

Book Description
Part of Water Quality Set - Buy all four books and save over 30% on buying separately! Bioanalytical Tools in Water Quality Assessment reviews the application of bioanalytical tools to the assessment of water quality including surveillance monitoring. The types of water included range from wastewater to drinking water, including recycled water, as well as treatment processes and advanced water treatment. Bioanalytical Tools in Water Quality Assessment not only demonstrates applications but also fills in the background knowledge in toxicology/ecotoxicology needed to appreciate these applications. Each chapter summarises fundamental material in a targeted way so that information can be applied to better understand the use of bioanalytical tools in water quality assessment. Bioanalytical tools in Water Quality Assessment can be used by lecturers teaching academic and professional courses and also by risk assessors, regulators, experts, consultants, researchers and managers working in the water sector. It can also be a reference manual for environmental engineers, analytical chemists, and toxicologists. Authors: Beate Escher, National Research Centre for Environmental Toxicology (EnTox), The University of Queensland, Australia, Frederic Leusch, Smart Water Research Facility (G51), Griffith University Gold Coast Campus, Australia. With contributions by Heather Chapman and Anita Poulsen

Science and Decisions

Science and Decisions PDF Author: National Research Council
Publisher: National Academies Press
ISBN: 0309120462
Category : Political Science
Languages : en
Pages : 422

Get Book Here

Book Description
Risk assessment has become a dominant public policy tool for making choices, based on limited resources, to protect public health and the environment. It has been instrumental to the mission of the U.S. Environmental Protection Agency (EPA) as well as other federal agencies in evaluating public health concerns, informing regulatory and technological decisions, prioritizing research needs and funding, and in developing approaches for cost-benefit analysis. However, risk assessment is at a crossroads. Despite advances in the field, risk assessment faces a number of significant challenges including lengthy delays in making complex decisions; lack of data leading to significant uncertainty in risk assessments; and many chemicals in the marketplace that have not been evaluated and emerging agents requiring assessment. Science and Decisions makes practical scientific and technical recommendations to address these challenges. This book is a complement to the widely used 1983 National Academies book, Risk Assessment in the Federal Government (also known as the Red Book). The earlier book established a framework for the concepts and conduct of risk assessment that has been adopted by numerous expert committees, regulatory agencies, and public health institutions. The new book embeds these concepts within a broader framework for risk-based decision-making. Together, these are essential references for those working in the regulatory and public health fields.

Chemometrics and Cheminformatics in Aquatic Toxicology

Chemometrics and Cheminformatics in Aquatic Toxicology PDF Author: Kunal Roy
Publisher: John Wiley & Sons
ISBN: 1119681596
Category : Science
Languages : de
Pages : 596

Get Book Here

Book Description
CHEMOMETRICS AND CHEMINFORMATICS IN AQUATIC TOXICOLOGY Explore chemometric and cheminformatic techniques and tools in aquatic toxicology Chemometrics and Cheminformatics in Aquatic Toxicology delivers an exploration of the existing and emerging problems of contamination of the aquatic environment through various metal and organic pollutants, including industrial chemicals, pharmaceuticals, cosmetics, biocides, nanomaterials, pesticides, surfactants, dyes, and more. The book discusses different chemometric and cheminformatic tools for non-experts and their application to the analysis and modeling of toxicity data of chemicals to various aquatic organisms. You’ll learn about a variety of aquatic toxicity databases and chemometric software tools and webservers as well as practical examples of model development, including illustrations. You’ll also find case studies and literature reports to round out your understanding of the subject. Finally, you’ll learn about tools and protocols including machine learning, data mining, and QSAR and ligand-based chemical design methods. Readers will also benefit from the inclusion of: A thorough introduction to chemometric and cheminformatic tools and techniques, including machine learning and data mining An exploration of aquatic toxicity databases, chemometric software tools, and webservers Practical examples and case studies to highlight and illustrate the concepts contained within the book A concise treatment of chemometric and cheminformatic tools and their application to the analysis and modeling of toxicity data Perfect for researchers and students in chemistry and the environmental and pharmaceutical sciences, Chemometrics and Cheminformatics in Aquatic Toxicology will also earn a place in the libraries of professionals in the chemical industry and regulators whose work involves chemometrics.

Environmental Toxicity Testing

Environmental Toxicity Testing PDF Author: K. Clive Thompson
Publisher: John Wiley & Sons
ISBN: 140514470X
Category : Science
Languages : en
Pages : 408

Get Book Here

Book Description
As an integral component of environmental policy, it has become essential to regulate and monitor toxic substances. Past emphasis has been primarily on analytical approaches to the detection of specific, targeted contaminants, thus allowing chemical characterisation. However, toxicity testing or biological assessment is necessary for ecotoxicological evaluation, and this offers marked benefits and advantages that complement chemical analysis. Key issues to be addressed include identification of pertinent tests, reproducibility and robustness of these tests, and cost considerations.This book examines these issues and describes and explains the approaches that have been developed for environmental toxicity evaluations. Advantages, benefits and drawbacks of the strategies and methods are highlighted. Directed equally at ecotoxicologists, industrial chemists, analytical chemists and environmental consultants, this book is written in a way that will prove helpful to both new and experienced practitioners.

Green Toxicology

Green Toxicology PDF Author: Alexandra Maertens
Publisher: Royal Society of Chemistry
ISBN: 1839164409
Category : Science
Languages : en
Pages : 225

Get Book Here

Book Description
Green toxicology is an integral part of green chemistry. One of the key goals of green chemistry is to design less toxic chemicals. Therefore, an understanding of toxicology and hazard assessment is important for any chemist working in green chemistry, but toxicology is rarely part of most chemists' education. As a consequence, chemists lack the toxicological lens necessary to view chemicals in order to design safer substitutions. This book seeks to fill that gap and demonstrate how a basic understanding of toxicology, as well as the tools of in silico and in vitro toxicology, can be an integral part of green chemistry. R&D chemists, product stewards, and toxicologists who work in the field of sustainability, can all benefit from integrating green toxicology principles into their work. Topics include in silico tools for hazard assessment, toxicity testing, and lifecycle considerations, this book aims to act as a bridge between green toxicologists and green chemists.