Data Mining and Statistical Methods for Knowledge Discovery in Diseases Based on Multimodal Omics

Data Mining and Statistical Methods for Knowledge Discovery in Diseases Based on Multimodal Omics PDF Author: Jiajie Peng
Publisher: Frontiers Media SA
ISBN: 2889761746
Category : Science
Languages : en
Pages : 160

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Book Description


High Dimensional Statistical and Computational Methods for Knowledge Discovery and Data Mining in Biomedical Data

High Dimensional Statistical and Computational Methods for Knowledge Discovery and Data Mining in Biomedical Data PDF Author: Funan Shi
Publisher:
ISBN:
Category :
Languages : en
Pages : 106

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Book Description


Data Mining in Medical and Biological Research

Data Mining in Medical and Biological Research PDF Author: Eugenia Giannopoulou
Publisher: BoD – Books on Demand
ISBN: 9537619303
Category : Medical
Languages : en
Pages : 334

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Book Description
This book intends to bring together the most recent advances and applications of data mining research in the promising areas of medicine and biology from around the world. It consists of seventeen chapters, twelve related to medical research and five focused on the biological domain, which describe interesting applications, motivating progress and worthwhile results. We hope that the readers will benefit from this book and consider it as an excellent way to keep pace with the vast and diverse advances of new research efforts.

Data Mining for Biomarker Discovery

Data Mining for Biomarker Discovery PDF Author: Panos M. Pardalos
Publisher: Springer Science & Business Media
ISBN: 1461421071
Category : Business & Economics
Languages : en
Pages : 256

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Book Description
Biomarker discovery is an important area of biomedical research that may lead to significant breakthroughs in disease analysis and targeted therapy. Biomarkers are biological entities whose alterations are measurable and are characteristic of a particular biological condition. Discovering, managing, and interpreting knowledge of new biomarkers are challenging and attractive problems in the emerging field of biomedical informatics. This volume is a collection of state-of-the-art research into the application of data mining to the discovery and analysis of new biomarkers. Presenting new results, models and algorithms, the included contributions focus on biomarker data integration, information retrieval methods, and statistical machine learning techniques. This volume is intended for students, and researchers in bioinformatics, proteomics, and genomics, as well engineers and applied scientists interested in the interdisciplinary application of data mining techniques.

Interactive Knowledge Discovery and Data Mining in Biomedical Informatics

Interactive Knowledge Discovery and Data Mining in Biomedical Informatics PDF Author: Andreas Holzinger
Publisher: Springer
ISBN: 9783662439678
Category : Computers
Languages : en
Pages : 357

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Book Description
One of the grand challenges in our digital world are the large, complex and often weakly structured data sets, and massive amounts of unstructured information. This “big data” challenge is most evident in biomedical informatics: the trend towards precision medicine has resulted in an explosion in the amount of generated biomedical data sets. Despite the fact that human experts are very good at pattern recognition in dimensions of = 3; most of the data is high-dimensional, which makes manual analysis often impossible and neither the medical doctor nor the biomedical researcher can memorize all these facts. A synergistic combination of methodologies and approaches of two fields offer ideal conditions towards unraveling these problems: Human–Computer Interaction (HCI) and Knowledge Discovery/Data Mining (KDD), with the goal of supporting human capabilities with machine learning./ppThis state-of-the-art survey is an output of the HCI-KDD expert network and features 19 carefully selected and reviewed papers related to seven hot and promising research areas: Area 1: Data Integration, Data Pre-processing and Data Mapping; Area 2: Data Mining Algorithms; Area 3: Graph-based Data Mining; Area 4: Entropy-Based Data Mining; Area 5: Topological Data Mining; Area 6 Data Visualization and Area 7: Privacy, Data Protection, Safety and Security.

Machine Learning Methods for Multi-Omics Data Integration

Machine Learning Methods for Multi-Omics Data Integration PDF Author: Abedalrhman Alkhateeb
Publisher: Springer
ISBN: 9783031365010
Category : Science
Languages : en
Pages : 0

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Book Description
The advancement of biomedical engineering has enabled the generation of multi-omics data by developing high-throughput technologies, such as next-generation sequencing, mass spectrometry, and microarrays. Large-scale data sets for multiple omics platforms, including genomics, transcriptomics, proteomics, and metabolomics, have become more accessible and cost-effective over time. Integrating multi-omics data has become increasingly important in many research fields, such as bioinformatics, genomics, and systems biology. This integration allows researchers to understand complex interactions between biological molecules and pathways. It enables us to comprehensively understand complex biological systems, leading to new insights into disease mechanisms, drug discovery, and personalized medicine. Still, integrating various heterogeneous data types into a single learning model also comes with challenges. In this regard, learning algorithms have been vital in analyzing and integrating these large-scale heterogeneous data sets into one learning model. This book overviews the latest multi-omics technologies, machine learning techniques for data integration, and multi-omics databases for validation. It covers different types of learning for supervised and unsupervised learning techniques, including standard classifiers, deep learning, tensor factorization, ensemble learning, and clustering, among others. The book categorizes different levels of integrations, ranging from early, middle, or late-stage among multi-view models. The underlying models target different objectives, such as knowledge discovery, pattern recognition, disease-related biomarkers, and validation tools for multi-omics data. Finally, the book emphasizes practical applications and case studies, making it an essential resource for researchers and practitioners looking to apply machine learning to their multi-omics data sets. The book covers data preprocessing, feature selection, and model evaluation, providing readers with a practical guide to implementing machine learning techniques on various multi-omics data sets.

Intelligent data analysis in medicine and pharmacology

Intelligent data analysis in medicine and pharmacology PDF Author: Nada Lavrač
Publisher:
ISBN: 9781461560609
Category :
Languages : en
Pages : 336

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Book Description
Intelligent data analysis, data mining and knowledge discovery in databases have recently gained the attention of a large number of researchers and practitioners. This is witnessed by the rapidly increasing number of submissions and participants at related conferences and workshops, by the emergence of new journals in this area (e.g., Data Mining and Knowledge Discovery, Intelligent Data Analysis, etc.), and by the increasing number of new applications in this field. In our view, the awareness of these challenging research fields and emerging technologies has been much larger in industry than in medicine and pharmacology. The main purpose of this book is to present the various techniques and methods that are available for intelligent data analysis in medicine and pharmacology, and to present case studies of their application. Intelligent Data Analysis in Medicine and Pharmacology consists of selected (and thoroughly revised) papers presented at the First International Workshop on Intelligent Data Analysis in Medicine and Pharmacology (IDAMAP-96) held in Budapest in August 1996 as part of the 12th European Conference on Artificial Intelligence (ECAI-96), IDAMAP-96 was organized with the motivation to gather scientists and practitioners interested in computational data analysis methods applied to medicine and pharmacology, aimed at narrowing the increasing gap between excessive amounts of data stored in medical and pharmacological databases on the one hand, and the interpretation, understanding and effective use of stored data on the other hand. Besides the revised Workshop papers, the book contains a selection of contributions by invited authors. The expected readership of the book is researchers and practitioners interested in intelligent data analysis, data mining, and knowledge discovery in databases, particularly those who are interested in using these technologies in medicine and pharmacology. Researchers and students in artificial intelligence and statistics should find this book of interest as well. Finally, much of the presented material will be interesting to physicians and pharmacologists challenged by new computational technologies, or simply in need of effectively utilizing the overwhelming volumes of data collected as a result of improved computer support in their daily professional practice.

Methodologies of Multi-Omics Data Integration and Data Mining

Methodologies of Multi-Omics Data Integration and Data Mining PDF Author: Kang Ning
Publisher: Springer Nature
ISBN: 9811982104
Category : Medical
Languages : en
Pages : 173

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Book Description
This book features multi-omics big-data integration and data-mining techniques. In the omics age, paramount of multi-omics data from various sources is the new challenge we are facing, but it also provides clues for several biomedical or clinical applications. This book focuses on data integration and data mining methods for multi-omics research, which explains in detail and with supportive examples the “What”, “Why” and “How” of the topic. The contents are organized into eight chapters, out of which one is for the introduction, followed by four chapters dedicated for omics integration techniques focusing on several omics data resources and data-mining methods, and three chapters dedicated for applications of multi-omics analyses with application being demonstrated by several data mining methods. This book is an attempt to bridge the gap between the biomedical multi-omics big data and the data-mining techniques for the best practice of contemporary bioinformatics and the in-depth insights for the biomedical questions. It would be of interests for the researchers and practitioners who want to conduct the multi-omics studies in cancer, inflammation disease, and microbiome researches.

Medical Data Mining and Knowledge Discovery

Medical Data Mining and Knowledge Discovery PDF Author: Krzysztof J. Cios
Publisher: Physica
ISBN:
Category : Computers
Languages : en
Pages : 528

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Book Description
Modern medicine generates, almost daily, huge amounts of heterogeneous data. For example, medical data may contain SPECT images, signals like ECG, clinical information like temperature, cholesterol levels, etc., as well as the physician's interpretation. Those who deal with such data understand that there is a widening gap between data collection and data comprehension. Computerized techniques are needed to help humans address this problem. This volume is devoted to the relatively young and growing field of medical data mining and knowledge discovery. As more and more medical procedures employ imaging as a preferred diagnostic tool, there is a need to develop methods for efficient mining in databases of images. Other significant features are security and confidentiality concerns. Moreover, the physician's interpretation of images, signals, or other technical data, is written in unstructured English which is very difficult to mine. This book addresses all these specific features.

Integrating Omics Data

Integrating Omics Data PDF Author: George Tseng
Publisher: Cambridge University Press
ISBN: 1316299406
Category : Medical
Languages : en
Pages : 497

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Book Description
In most modern biomedical research projects, application of high-throughput genomic, proteomic, and transcriptomic experiments has gradually become an inevitable component. Popular technologies include microarray, next generation sequencing, mass spectrometry and proteomics assays. As the technologies have become mature and the price affordable, omics data are rapidly generated, and the problem of information integration and modeling of multi-lab and/or multi-omics data is becoming a growing one in the bioinformatics field. This book provides comprehensive coverage of these topics and will have a long-lasting impact on this evolving subject. Each chapter, written by a leader in the field, introduces state-of-the-art methods to handle information integration, experimental data, and database problems of omics data.