Combining Nanofluidics and Plasmonics for Single Molecule Detection

Combining Nanofluidics and Plasmonics for Single Molecule Detection PDF Author: Melanie M. West
Publisher:
ISBN:
Category : Nanofluids
Languages : en
Pages : 107

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Book Description
Single molecule detection is limited by the small scattering cross-section of molecules which leads to weak optical signals that can be obscured by background noise. The combination of plasmonics and nanofluidics in an integrated nano-device has the potential to provide the signal enhancement necessary for the detection of single molecules. The purpose of this investigation was to optimize the fabrication of an optofluidic device that integrates a nanochannel with a plasmonic bowtie antenna. The fluidic structure of the device was fabricated using UV-nanoimprint lithography, and the gold plasmonic antennas were fabricated using a shadow evaporation and lift-off process. The effect of electron beam lithography doses on the resolution of antenna-nanochannel configurations was studied to minimize antenna gap size while maintaining the integrity of the imprinted features. The smallest antenna gap size that was achieved was 46 nm. The antennas were characterized using dark field spectroscopy to find the resonance shift, which indicated the appropriate range for optical signal enhancement. The dark field scattering results showed antennas with a broad and well-defined resonance shift that ranged from 650 - 800 nm. The Raman scattering results showed the highest enhancement factor (EF = 2) for antennas with an "inverted configuration," which involved having the triangles of the antenna facing back-to-back rather than the more conventional tip-to-tip bowtie arrangement.

Combining Nanofluidics and Plasmonics for Single Molecule Detection

Combining Nanofluidics and Plasmonics for Single Molecule Detection PDF Author: Melanie M. West
Publisher:
ISBN:
Category : Nanofluids
Languages : en
Pages : 107

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Book Description
Single molecule detection is limited by the small scattering cross-section of molecules which leads to weak optical signals that can be obscured by background noise. The combination of plasmonics and nanofluidics in an integrated nano-device has the potential to provide the signal enhancement necessary for the detection of single molecules. The purpose of this investigation was to optimize the fabrication of an optofluidic device that integrates a nanochannel with a plasmonic bowtie antenna. The fluidic structure of the device was fabricated using UV-nanoimprint lithography, and the gold plasmonic antennas were fabricated using a shadow evaporation and lift-off process. The effect of electron beam lithography doses on the resolution of antenna-nanochannel configurations was studied to minimize antenna gap size while maintaining the integrity of the imprinted features. The smallest antenna gap size that was achieved was 46 nm. The antennas were characterized using dark field spectroscopy to find the resonance shift, which indicated the appropriate range for optical signal enhancement. The dark field scattering results showed antennas with a broad and well-defined resonance shift that ranged from 650 - 800 nm. The Raman scattering results showed the highest enhancement factor (EF = 2) for antennas with an "inverted configuration," which involved having the triangles of the antenna facing back-to-back rather than the more conventional tip-to-tip bowtie arrangement.

Plasmonics in Chemistry and Biology

Plasmonics in Chemistry and Biology PDF Author: Marc Lamy de la Chapelle
Publisher: CRC Press
ISBN: 042985868X
Category : Science
Languages : en
Pages : 308

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Book Description
Over the past decade, plasmonic nanoparticles have been the subject of extensive research, owing to their remarkable optical properties. These properties arise from a collective oscillation of the conductive electrons at the nanoparticle surface under light irradiation, known as localized surface plasmon (LSP). LSP is characterized by (i) a strong absorption and scattering of the light depending on the geometrical parameters of the nanoparticles and (ii) a strong amplification of the local field in the vicinity of the nanoparticles. Quite recently, it was shown that the activation and the initiation of chemical reactions or physical processes can be facilitated using LSP excitation. Such exploitation presents two main advantages: an enhanced yield and a fine control of chemical reactions at the nanoscale. These topics have become very active and are in line with molecular plasmonics. This book explores this new field and provides a broad view on the exploitation of plasmonics in chemical and biological fields.

Nanofluidics for Single Molecule DNA Sequencing

Nanofluidics for Single Molecule DNA Sequencing PDF Author: Padmini Krishnakumar
Publisher:
ISBN:
Category : Nanofluids
Languages : en
Pages : 131

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Book Description
After a decade of efforts, accurate and affordable DNA sequencing continues to remain an important goal in current research landscape. This thesis starts with a brief overview of the recent updates in the field of DNA sequencing technologies followed by description of the nanofluidics route to single molecule DNA detection. Chapter 2 presents discusses carbon nanotube(CNT) based nanofluidics. The fabrication and DNA sensing measurements of CNT forest membrane devices are presented. Chapter 3 gives the background for functionalization and recognition aspects of reader molecules. Chapter 4 marks the transition to solid state nanopore nanofluidics. The fabrication of Imidazole functionalized nanopores is discussed. The Single Molecule detection results of DNA from Palladium nanopore devices are presented next. Combining chemical recognition to nanopore technology, it has been possible to prolong the duration of single molecule events from the order of a few micro seconds to upto a few milliseconds. Overall, the work presented in this thesis promises longer single molecule detection time in a nanofludic set up and paves way for novel nanopore- tunnel junction devices that combine recognition chemistry, tunneling device and nanopore approach.

Molecular Plasmonics

Molecular Plasmonics PDF Author: Wolfgang Fritzsche
Publisher: John Wiley & Sons
ISBN: 3527649700
Category : Technology & Engineering
Languages : en
Pages : 208

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Book Description
Adopting a novel approach, this book provides a unique "molecular perspective" on plasmonics, concisely presenting the fundamentals and applications in a way suitable for beginners entering this hot field as well as for experienced researchers and practitioners. It begins by introducing readers to the optical effects that occur at the nanoscale and particularly their modification in the presence of biomolecules, followed by a concise yet thorough overview of the different methods for the actual fabrication of nanooptical materials. Further chapters address the relevant nanooptics, as well as the various approaches to combining nanostructures and biomolecules to achieve certain desired functionalities for applications in the fields of probing, sensing and particle manipulation. For analytical biologists, physical chemists, materials scientists and medicinal chemists.

Extended-nanofluidic Systems For Chemistry And Biotechnology

Extended-nanofluidic Systems For Chemistry And Biotechnology PDF Author: Takehiko Kitamori
Publisher: World Scientific
ISBN: 1908977671
Category : Science
Languages : en
Pages : 187

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Book Description
For the past decade, new research fields utilizing microfluidics have been formed. General micro-integration methods were proposed, and the supporting fundamental technologies were widely developed. These methodologies have made various applications in the fields of analytical and chemical synthesis, and their superior performances such as rapid, simple, and high efficient processing have been proved. Recently, the space is further downscaling to 101-103nm scale (we call the space extended-nano space). The extended-nano space located between the conventional nanotechnology (100-101nm) and microtechnology (>1μm), and the research tools are not well established. In addition, the extended-nano space is a transient space from single molecules to bulk condensed phase, and fluidics and chemistry are not unknown. For these purposes, basic methodologies were developed, and new specific phenomena in fluidics and chemistry were found. These new phenomena were applied to unique chemical operations such as concentration and ion selection. The new research fields which are now being created are quite different from those in microspace. Unique devices are also increasingly being reported. In this book, we describe the fundamental technologies for extended-nano space and show the unique liquid properties found in this space and applications for single molecule or cell analysis.The research area is very new and hence, exciting. In contrast to other specialized areas, the research fields require wide knowledge (chemistry, fluidics, mechanics, photonics, biology etc.) and state-of-the-art technologies (bottom-up and top-down fabrication for various hard and soft materials, precise fluidic control, single molecule detection methods, and particle surface modification methods etc.), which have not been not covered by conventional review papers or books. Therefore, researchers or students new to the field need a new book covering these fields including recent research topics, applications and problems to be solved in the future. Our motivation is to summarize the state-of-the-art technologies for research and demonstrate new chemistry and fluidics in extended-nano space for students and researchers in academia or industry. We also emphasize the potential large impact microfluidic technologies have on chemistry and biochemistry./a

Microfluidics and Nanofluidics Handbook, 2 Volume Set

Microfluidics and Nanofluidics Handbook, 2 Volume Set PDF Author: Sushanta K. Mitra
Publisher: CRC Press
ISBN: 1466515740
Category : Science
Languages : en
Pages : 1767

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Book Description
A comprehensive, two-volume handbook on Microfluidics and Nanofluidics, this text covers fundamental aspects, fabrication techniques, introductory materials on microbiology and chemistry, measurement techniques, and applications with special emphasis on the energy sector. Each chapter begins with introductory coverage to a subject and then narrows in on advanced techniques and concepts, thus making it valuable to students and practitioners. The author pays special attention to applications of microfluidics in the energy sector and provides insight into the world of opportunities nanotechnology has to offer. Figures, tables, and equations to illustrate concepts.

Nanoscale Photonics

Nanoscale Photonics PDF Author: Siddharth Ghosh
Publisher:
ISBN:
Category :
Languages : en
Pages : 0

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Book Description
Detecting single nanometre scale objects and studying them in a controlled manner in solution is still a difficult task due to diffusion. We demonstrate one-dimensional nanofluidic flows of single molecules by confining diffusion in two spatial dimensions. A high-throughput nanofabrication process was developed using electron-beam lithography, reactive ion etching, and shadow-angle- electron-beam deposition to prepare the required nanofluidic devices. We used the device to detect single organic dye molecules, nanodots, and small DNA molecules using two-foci fluorescence correlation spectros...

Nanofluidics

Nanofluidics PDF Author: Joshua Benno Edel
Publisher: Royal Society of Chemistry
ISBN: 0854041478
Category : Science
Languages : en
Pages : 212

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Book Description
In his celebrated lecture at the APS meeting in 1959, Richard Feynman pondered the potential of miniaturization in the physical sciences and proposed a variety of new nano-tools. Since then, many of these predictions have become reality including the development and application of nanofluidics. This timely book fills a gap in the current reference literature in this exciting and growing field and is dedicated to the field of nanofluidics with a focus on bioanalytical applications. These nanoscale analytical instruments employ micromachined features and are able to manipulate fluid samples with high precision and efficiency. The book is written at a level accessible to experts and non-experts alike and is essential reading for all advanced nanobiotechnology courses within academic institutions.

Nanofluidic Single Molecule Detection (SMD) for Protein Detection and Interaction Dynamics Study

Nanofluidic Single Molecule Detection (SMD) for Protein Detection and Interaction Dynamics Study PDF Author: Nan Jing
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description
The objective of this work is to develop a micro/nanofluidic-based single molecule detection (SMD) scheme, which would allow us to inspect individual protein or protein complex study protein-protein interactions and their dynamics. This is a collaboration work with MD Anderson Cancer Center and we applied this scheme to study functions of various proteins related to cancer progression in hope to shed new light on cancer research. State-of-the-art micro/nano-fabrication technology is used to provide fused silica micro/nano-fluidic channel devices as our detection platform. Standard contact photolithography, projection photolithography and advanced electron-beam lithography are used to fabricate micro/nano-fluidic channel with width ranging from 100nm to 2[micron]. The dimensions of these miniaturized biochips are designed to ensure single molecule resolution during detection and shrinking the detection volume leads to increase in signal-to-noise ratio, which is very critical for SMD. To minimize surface adsorption of protein, a fused silica channel surface coating procedure is also developed and significantly improved the detection efficiency. A fluorescent-labeled protein sample solution is filled in the fluidic channel by capillary force, and proteins are electro-kinetically driven through the fluidic channel with external voltage source. Commercial functionalized Quantum Dots (Qdots) are used as fluorescent labels due to its various advantages over conventional organic dyes for single molecule multi-color detection application. A fluorescence correlation spectrometer system, equipped with a 375nm diode laser, 60x water immersion objective with N.A. of 1.2 and two avalanche photodiodes (APD) is implemented to excite single molecules as well as collect emitted fluorescence signals. A two-dimensional photon burst analysis technique (photon counts vs. burst width) is developed to analyze individual single molecule events. We are able to identify target protein or protein complex directly from cell lysate based on fluorescence photon counts, as well as study the dynamics of protein-protein interactions. More importantly, with this technique we are also able to assess interactions between three proteins, which cannot be done with current ensemble measurement techniques. In summary, the technique described in this work has the advantages of high sensitivity, short processing time (2-3 minutes), very small sample consumption and high resolution quantitative analysis. It could potentially revolutionize the area of protein interaction research and provides us with more clues for the future of cancer diagnostics and treatments.

Single Molecule Electrophoresis and Optical Detection Using Thermoplastic Nanofluidic Devices

Single Molecule Electrophoresis and Optical Detection Using Thermoplastic Nanofluidic Devices PDF Author: Kumuditha Madushanka Weerakoon Ratnayake
Publisher:
ISBN:
Category :
Languages : en
Pages :

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Book Description